ID AM085135; SV 1; linear; genomic RNA; STD; VRL; 4303 BP. XX AC AM085135; XX DT 23-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 2) XX DE Amasya cherry disease-associated mycovirus RdRp gene for RNA-dependent RNA DE polymerase 2, genomic RNA XX KW RdRp gene; RNA-dependent RNA polymerase 2. XX OS Amasya cherry disease-associated mycovirus OC Viruses; Riboviria; Partitiviridae; Alphapartitivirus. XX RN [1] RP 1-4303 RA Coutts R.H.A.; RT ; RL Submitted (08-SEP-2005) to the INSDC. RL Coutts R.H.A., Biology, Faculty of Life Sciences, Imperial College London, RL Sir Alexander Fleming Building, Imperial College Road, SW7 2AZ, UNITED RL KINGDOM. XX RN [2] RX DOI; 10.1099/vir.0.82121-0. RX PUBMED; 16963771. RA Kozlakidis Z., Covelli L., Di Serio F., Citir A., Acikgoz S., Hernandez C., RA Ragozzino A., Flores R., Coutts R.H.A.; RT "Molecular characterization of the largest mycoviral-like double-stranded RT RNAs associated with Amasya cherry disease, a disease of presumed fungal RT aetiology"; RL J. Gen. Virol. 87(Pt 10):3113-3117(2006). XX DR MD5; 1a683d7cfaf6fd834124b71f4dd99adc. DR EuropePMC; PMC6356713; 30585188. XX FH Key Location/Qualifiers FH FT source 1..4303 FT /organism="Amasya cherry disease-associated mycovirus" FT /mol_type="genomic RNA" FT /country="Turkey:Amasya" FT /isolation_source="unidentified fungus" FT /note="unclassified putative mycovirus (putative member of FT the family Totiviridae)" FT /db_xref="taxon:284689" FT CDS 74..3958 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase 2" FT /function="polymerase" FT /db_xref="GOA:Q1HA37" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:Q1HA37" FT /protein_id="CAJ29959.1" FT /translation="MAHHMFMENLSVSNDQGSPFINNDELPEHQRARRAPNSSTGASGR FT GNPGAWVMYPDDKLADFISFLANTEIDDMCSASEVGIAPELIKVLRSTGVRTSPLDAFA FT DPNYCVCDNELRFIDHREAALNLKKWVGSAIVQKKQYAMGVHPMTSPVPNEDPMLLSFA FT PQSLKTIAVLGGARAVTTDIAAHACQLLLNQQAEGRSERDQVILNAVLLHTMESRASIR FT PMKIQSRMGSNHAVVDPMNAISVKHSVTEDGYLREYSDFCEANRSTISTMMAKCMKAGI FT AHHGLDGLRTEEASASSKLASKRAGDVGQSKAMAAGDISRVDAMVVASQVSWWHPGVTM FT WIAAYKMSVAMLSSAKALTLSDKEVQCLVEYTFSRTTYRKLVASNALMDSTRDIAASEV FT TQAASTPIRWERQVHPLVLVLDDAEYSITRKTASVELTSVYNKVHAYMALGLGAMYGDI FT AKTGMQQPNSIGTGLLARSGRSQRASPVFARVQLTESAVTVTACPTSDSDAVLMTINKG FT VEKAGLHNIVLGNEVVKVIKKPEYGMTLTYLIPSTISGKGADKSYVYLAGMHFREDSLS FT YSLPTLEFLSQFTTLYEPMSPVKRQKMFRLLVDPTTTRVHHRHMSLLTVMATCGHAWAP FT CMDKVLQWPDITNTFMSSLLLAMAALPPELYVLMVEWNGWAKCDSMAEYILEAKNLTTK FT MKALDNQVTLGDFELDLAPLFEWEVLNHRAVLKGIYDKELIERRDEKQSIKLTAEELEA FT EIDSVFQDVSAVLDSRTEEGGKSPLYATWSDWYVDRVQTTPAGSAFTVNKDMMEARNML FT KANGVQNLTKTQVMAQMRDNLPLSAVIGCEPMILAQMSWKLEWSKLRALFAASMEHWMP FT SAFSLGQIEEYLPSDCPIGKAADAHNVCRRVMEMSTQGVVACIDAKNFNILHTHKIMSA FT ILTSASKMLGNRLSEEQHECLRWLAKAELNQKVLVKTGEVTEQMLEKGRQEGWINRLTK FT GDGTVVEAADVTVGMFSGTRFTMLYNTVLNRAYYKVAEKRAQIKTLSLHSGDDVYAVFA FT NYIDVYKMKREMAKIGYTLQLGKCFLQGVREFLRISHKNANTSQYLARSAATAIHGRIE FT ADEPSDFVAFVGSIMRRGAEMVVRHAARAVLLDVMKIQIAGACARWAVTAMAWDSFLML FT PKIMGGCAAKARLTEQWNGFSIERTASARGSIVDYLAEQPGTRTAARRLVDKLQITKYH FT RRVAQAVAAAIAPKGVLKNYGMIVRWMNKDDMAHMSGVAGSLGRIRQSREYILSKAAGL FT FNTLAINDNF" XX SQ Sequence 4303 BP; 1273 A; 895 C; 1219 G; 916 T; 0 other; tacgataaaa cactagaact actttacgga ctgcaacaac gaaagtagtg cagtgaaaat 60 acgaaactca atcatggcgc accacatgtt catggaaaac ttgtcagtta gcaacgacca 120 aggatcgcca ttcatcaata atgacgagct gcctgagcac cagagggcaa gaagagcgcc 180 aaacagctca actggggcta gtgggagggg aaaccctgga gcatgggtga tgtaccctga 240 tgacaagtta gcagacttca tatctttctt ggctaacacg gaaattgatg acatgtgctc 300 tgcgagcgaa gttggtattg cacctgagtt gatcaaagtg ctgaggtcaa caggggttag 360 aacaagccct ttagacgcct ttgctgatcc gaattactgt gtgtgcgaca atgagcttag 420 gttcattgac cacagagagg ctgcattgaa cctcaaaaag tgggtgggct cagcaatagt 480 acaaaagaag caatatgcca tgggtgtaca ccccatgacg tctccagtac caaacgaaga 540 cccaatgttg ttgtcttttg caccgcagag cctcaaaacg attgccgtac taggaggtgc 600 tagagcagtg acgactgaca ttgctgccca tgcatgtcag ctactgttga accagcaagc 660 agagggtagg tcagagagag accaagtgat cctcaacgcc gtattgctgc acacgatgga 720 gtcaagagca tcgataaggc caatgaagat acaatcaagg atggggtcta atcacgcggt 780 tgtcgacccg atgaacgcaa taagcgtaaa gcattcagtc acggaagacg ggtacctgag 840 ggagtactca gatttctgtg aggcaaacag gagcaccatc agtacgatga tggcaaaatg 900 catgaaagct ggtatagcgc accacggcct ggacgggctg cgtacagagg aggcatctgc 960 aagttcgaag ctagcaagca agagggcagg cgacgttggc caaagcaagg ccatggccgc 1020 tggagacata agtcgtgtgg atgcaatggt ggttgcatca caagtgagct ggtggcaccc 1080 tggcgtcacg atgtggatag cggcatacaa gatgtccgta gccatgctgt ccagcgcaaa 1140 ggctttgacg ctctcggaca aggaagtaca gtgcctagtg gagtacacat tcagcagaac 1200 cacttacagg aagttagtag ctagtaatgc cttgatggat tcaactaggg acatagctgc 1260 cagtgaggtg actcaagcgg catctacgcc aataaggtgg gagaggcagg tgcacccgct 1320 ggtactcgtg ctggatgacg cagaatactc gataaccaga aagactgcaa gcgtcgagtt 1380 gactagcgtg tacaataaag tgcacgcata catggcattg ggtctgggcg ctatgtatgg 1440 tgacatagct aagacaggca tgcagcagcc taacagcatt ggaactggat tgttggctag 1500 atctggaagg tcacaaagag ccagccctgt atttgcacga gtgcaattga ccgaaagcgc 1560 agtaacagta acagcatgcc ccacttcgga ttcagacgca gtgctgatga ccatcaataa 1620 aggggtggaa aaagctgggt tgcacaacat tgtgttgggt aatgaggtag tgaaggttat 1680 aaagaagcct gagtacggta tgactctgac atacttaata ccgtcaacta ttagcggcaa 1740 aggtgcagac aagtcatacg tgtacctggc aggcatgcac ttcagagagg atagtttaag 1800 ctactctttg ccaactctgg aattcttgtc acagtttacc acgctatacg agcccatgtc 1860 acctgtaaaa aggcagaaga tgtttaggct gctagtagat ccgactacca cgcgtgtgca 1920 ccataggcac atgtcactgc tgactgtgat ggcaacatgc ggacatgctt gggcaccttg 1980 tatggacaaa gtgctgcaat ggcctgacat aaccaacacg tttatgtctt ccctactttt 2040 ggcgatggct gcactgccac cagagttgta cgtgttgatg gttgagtgga atggttgggc 2100 caagtgtgac tctatggcgg agtacatact agaggccaaa aacctgacta cgaagatgaa 2160 agcgctagac aaccaagtca ctctgggaga cttcgagctt gaccttgccc ctctgtttga 2220 gtgggaagtg ctcaatcaca gagctgtcct aaaaggcatc tatgataagg agctaattga 2280 gaggcgagat gaaaaacaga gcatcaagct aacagcagaa gagctagaag cggagatcga 2340 tagcgtgttc caagatgtga gtgcagtgtt ggactcaagg acggaagaag ggggaaagtc 2400 acctctgtat gcaacgtgga gtgactggta tgtggacagg gtgcagacaa cacctgcagg 2460 ctcggctttc acggtcaaca aagacatgat ggaagcgagg aacatgctta aagccaacgg 2520 tgtgcagaac ttgacaaaga ctcaagtgat ggcgcagatg agggacaatt tgccattgtc 2580 agctgtgata ggctgcgagc caatgatatt ggctcagatg tcatggaagt tagagtggtc 2640 taaactgcgt gcgttgttcg ctgcaagcat ggagcactgg atgccttcgg ctttttcgct 2700 tggacaaata gaggagtatc tgccaagtga ctgtccgata ggcaaggctg ctgacgccca 2760 caacgtctgc agacgtgtga tggaaatgtc gacgcagggg gtagtagcgt gtatagacgc 2820 taagaatttt aacattctgc acacacacaa gatcatgtcg gctatattaa cttcagcttc 2880 aaagatgcta ggaaacagac tatcagagga gcaacatgag tgtctgcgct ggttggccaa 2940 ggcagaattg aaccaaaaag tgctggtgaa aacaggtgag gtgactgagc aaatgttgga 3000 gaaaggcagg caagaaggct ggattaacag gttgacaaaa ggtgacggga ctgtagttga 3060 agcagcggat gtcacagtgg gtatgttttc aggcaccagg ttcactatgc tgtacaacac 3120 ggtacttaat agagcgtact acaaagtggc agagaaaagg gctcaaataa agacgctatc 3180 gctacactca ggtgacgatg tgtatgccgt ttttgctaac tacatcgacg tgtataaaat 3240 gaagagagag atggcgaaaa tagggtacac tctgcagttg gggaagtgct tcttgcaggg 3300 ggtgagagag ttcctgcgga tatcgcacaa aaatgcgaac acttctcaat acttagcaag 3360 gtccgcagcg actgcaatac atggcaggat agaagcagat gagccatctg attttgtcgc 3420 atttgttggg tcgataatga gacgcggtgc cgagatggtg gtcagacatg cggcaagagc 3480 tgtcttgctt gacgtaatga agatacagat agcaggggcg tgcgcaagat gggctgtgac 3540 tgcaatggcg tgggactcgt ttttgatgct gcctaagata atggggggat gcgcagcaaa 3600 agcgagactg acagaacagt ggaatgggtt ctcaatagag agaaccgcaa gcgcaagggg 3660 cagcatagtt gactacctcg cagagcaacc aggcacaaga acggctgcaa ggcgactagt 3720 agataaactg cagataacaa aatatcacag aagagtggca caagccgttg cagctgctat 3780 agcacccaaa ggcgtgctta agaactacgg catgatagtg aggtggatga acaaagatga 3840 catggcacac atgtcaggcg tggctggttc attaggtagg ataaggcagt caagggagta 3900 tatactatca aaagccgcgg gacttttcaa cacgctagct ataaatgaca acttctaggg 3960 agacgtgagt ggtgtcttca gaggaatacc atcagcatgg cacggtaggg cgttgacttt 4020 tgcgctgtcc gacaggagcg aatcagatgc cctgttttca agtagagtgt ataagctgca 4080 ctataaaatg acagagtggg caagagcagc tactgagaac aggattataa ggatacaact 4140 tgacttacca atcacgtagt aatcagaaaa cattgccatc cactagggaa gtggacacaa 4200 gcggagtagg cgaccggtgg caattaaata actagccagg ctgaatggcc gtacgtggct 4260 cccagacgta taaacattgg cgctatcaac tagtgctaac aca 4303 //