ID AM701767; SV 1; linear; genomic DNA; STD; VRL; 2774 BP. XX AC AM701767; XX DT 26-JUL-2007 (Rel. 92, Created) DT 26-JUL-2007 (Rel. 92, Last updated, Version 1) XX DE Tomato leaf curl Antsiranana virus cp, v2, rep, c2, c3 and c4 genes, DE isolated in Miandrivazo, Madagascar XX KW c2 gene; c3 gene; c4 gene; coat protein; cp gene; rep gene; KW replication associated protein; v2 gene. XX OS Tomato leaf curl Antsiranana virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2774 RA Lefeuvre P.; RT ; RL Submitted (25-APR-2007) to the INSDC. RL Lefeuvre P., AMIS, CIRAD - UMR PVBMT, 7 Chemin de l'IRAT, Ligne Paradis, RL Saint Pierre, 97410, REUNION. XX RN [2] RA Lefeuvre P., Martin D.P., Hoareau M., Naze F., Becker N., Delatte H., RA Reynaud B., Lett J.M.; RT "Begomovirus "melting pot" in the South West Indian Ocean Islands: RT molecular diversity and evolution through recombination"; RL Unpublished. XX DR MD5; b78638c495421288c1342faa7d2409e4. DR EuropePMC; PMC6344024; 30673741. XX FH Key Location/Qualifiers FH FT source 1..2774 FT /organism="Tomato leaf curl Antsiranana virus" FT /mol_type="genomic DNA" FT /country="Madagascar:Menabe, Miandrivazo" FT /isolation_source="Lycopersicum esculentum" FT /db_xref="taxon:439424" FT CDS 159..509 FT /transl_table=1 FT /gene="v2" FT /product="V2 protein" FT /db_xref="GOA:A7DXM2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A7DXM2" FT /protein_id="CAM91941.1" FT /translation="MWDPLLNEFPDSVHGFRCMLAVKYLQAVEETYEPNTLGHDLIRDL FT ICVIRARDYVEATRRYNYFHSRLESASKAELRQPVYQPCCCPHCPRHKQTSLMDVQAHV FT SKAQDVQNVQKP" FT CDS 319..1095 FT /transl_table=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:A7DXM3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A7DXM3" FT /protein_id="CAM91942.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPFTSRAVVPTVPGTSRRRSW FT TYRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRDDVKHTGIARCISDVTRGSGITH FT RVGKRFCIKSVYLLGKIWMDENIKKQNHTNQVMFFLVRDRRPYGSAPMDFGQVFNMFDN FT EPATATVKNDLRDRFQVMRKFHATVVGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1092..1496) FT /transl_table=1 FT /gene="c3" FT /product="C3 protein" FT /db_xref="GOA:A7DXL9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A7DXL9" FT /protein_id="CAM91943.1" FT /translation="MDLRTGELITAAQAQSGVFIWEIQNPLYFKILYHESRPFNMNQDI FT ILIQIRFNHNLRKALAIHRCFLNFKVWTSLRPQTGRFLRVFRTQVLKYLDRLGVVSINS FT VIRAVDYVLYDVLINTLQVTENHEIKFNIY" FT CDS complement(1237..1644) FT /transl_table=1 FT /gene="c2" FT /product="C2 protein" FT /db_xref="GOA:A7DXM5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A7DXM5" FT /protein_id="CAM91944.1" FT /translation="MQPSSPSTSHCSQIPIKVKHRIAKKRPIRRKRIDLNCGCSYYLHI FT NCINHGFTHRGTHHCSSSTEWRFYLGDSKSPVFQNPLPREPPIQHEPRHHINPDTVQPQ FT LEEGIGDSQMFSQLQGLDELTPSDWSFLKSV" FT CDS complement(1553..2629) FT /transl_table=1 FT /gene="rep" FT /product="replication associated protein" FT /db_xref="GOA:A7DXM6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A7DXM6" FT /protein_id="CAM91945.1" FT /translation="MRTPRFKIQAKNIFLTYPKCSLTKEHLLSFLQNLSLPTNPKYIKI FT CLEHHQNGEPHLHALIQFEGKLTCTNNRLFDCVHPSSSTCFHPNIQGAKSSSDVKSYLD FT KDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNTGSKSEALRVIRELAPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFLSSSFDQVPEELEVWVAENVMGSAARPWRPMSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNAPLKDWALKNATFVTLHQPLF FT SNTNQGQTPHSEEETHST" FT CDS complement(2173..2475) FT /transl_table=1 FT /gene="c4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A7DXM1" FT /protein_id="CAM91946.1" FT /translation="MGNLICMPLFNSRENSRAPTIASSIAYTQAVAPVSTPTYRELSPA FT LMSSPIWTRTEIPWSGESFRSMDDLQGGDNSQPMTLTPKHLTQAVSQRLLESLGS" XX SQ Sequence 2774 BP; 735 A; 557 C; 653 G; 829 T; 0 other; accggatggc cgcgcccccg aaaaaaaaag acgcgcccga aaaagaaagg tggtccccgc 60 acactagact atgtcagcca atcagaaagc cgtggaaagc ttagttattt gttttttgtc 120 cttatatact tggtccccaa gtattggtct ttgtcagcat gtgggatcca cttttgaacg 180 agttcccaga ctctgttcac gggtttcgtt gtatgcttgc tgttaaatat ttgcaggccg 240 ttgaggaaac ctacgagccc aatacattgg gccacgatct aatccgtgat cttatttgtg 300 ttatcagggc ccgtgactat gtcgaagcga cccggagata taattatttc cactcccgtc 360 tcgaaagtgc gtcgaaggct gaacttcgac agcccgttta ccagccgtgc tgttgtcccc 420 actgtcccag gcacaagcag acgtcgctca tggacgtaca ggcccatgta tcgaaagccc 480 aggatgtaca gaatgtacaa aagccctgat gttccaaggg gttgtgaagg cccatgtaag 540 gtccagtctt atgagcagag ggatgatgtc aagcataccg gtattgctcg ttgtattagt 600 gatgttacgc gtggttcggg tattacccat agagttggca agaggttttg tattaagtcc 660 gtttatcttt taggtaagat ctggatggat gaaaatatta agaagcagaa tcatactaat 720 caggttatgt tttttcttgt tcgtgataga aggccctatg gctcagcccc aatggatttt 780 ggacaggttt ttaacatgtt tgataatgag cctgctacag ctacggtgaa gaatgatttg 840 agagacagat ttcaagttat gcgcaaattt catgcaactg ttgttggtgg accctcagga 900 atgaaggagc aggcattagt taagagattt tttaggatta atagtcatgt aacttataat 960 catcaggagg cagcgaagta tgagaatcat actgagaatg ctttgttgtt gtatatggca 1020 tgtactcatg cttcgaatcc agtgtatgct actcttaaga tacggatcta tttttacgat 1080 tcggtcagca attaataaat attgaatttt atttcatgat tctccgtaac ttggagtgta 1140 tttataagta catcgtacaa tacataatca actgctcgta ttacagaatt aattgaaact 1200 acacctaatc tatctaaata ctttaaaact tgagtcctaa acactcttaa gaaacgacca 1260 gtctgagggc gtaagctcgt ccagaccttg aagttgagaa aacatctgtg aatcgccaat 1320 gccttcctca agttgtggtt gaaccgtatc tggattaata tgatgtcttg gttcatgttg 1380 aatgggcggc tctcgtggta gaggattttg aaatacaggg gattttgaat ctcccagata 1440 aaaacgccac tctgtgcttg agctgcagtg atgagttccc cggtgcgtaa atccatggtt 1500 gatgcagttg atgtgtagat agtaggagca gccgcaattt aggtctatgc gcttacgtcg 1560 aatgggtctc ttcttcgcta tgcggtgttt gaccttgatt ggtatttgag aacaatggct 1620 ggtggagggt gacgaaggtt gcattcttga gtgcccagtc ctttagtggt gcattctttt 1680 cctcgtctag gaactcttta tacgaggatg ttggtcctgg attgcaaagg aagatagtgg 1740 gaattccgcc tttaatttga attggcttcc cgtactttgt gttgctttgc cagtcccttt 1800 gggctcccat gaattctttg aagtgcttta aataatgcgg gtccacgtca tcaatgacgt 1860 tgaaccatgc atcgttacta tacacctttg ggctaagatc aagatgacca cacaaatagt 1920 tgtggggtcc caatgatctg gcccacattg tcttccccgt ccgactatca ccctcaatca 1980 caatactcat cggtctccaa ggccgcgcag cggaacccat gacgttctca gccacccaga 2040 cttcaagttc ttccggaact tgatcaaaag aagaagaaag aaaaggagaa acataaggag 2100 ccggaggctc ctgaaaaatc ctatctaaat tactatttaa attatgaaac tgtaaaacaa 2160 aatcttttgg agctaactcc ctaatgactc taagagcctc tgacttactg cctgtgttaa 2220 gtgctttggc gtaagcgtca ttggctgact gttgtccccc ccttgcagat cgtccatcga 2280 tctgaaactc tccccactcc agggtatctc cgtccttgtc cagataggac ttgacatcag 2340 agctggactt agctccctgt atgttggggt ggaaacaggt gctactgctt gggtgtacgc 2400 aatcgaagag gcgattgttg gtgcacgtga gttttccctc gaattgaata agggcatgca 2460 gatgaggttc cccattctgg tggtgttcaa ggcagatttt gatatattta gggttagttg 2520 gtaatgaaag gttttgtaag aatgatagaa ggtgttcttt ggtaagagaa cacttaggat 2580 aagtgaggaa aatgtttttg gcttgaattt taaaacgtgg agttctcatg ttgacttggt 2640 caattggaga cactcgcttg gagtatctcc ggtgaattgg agacaatata tagtgtctcc 2700 aaatggcatt tctgtaataa ccctcattgt aatttgaatt tcaaaattca aaaagcggcc 2760 atccgtataa tatt 2774 //