ID AY129663; SV 1; linear; mRNA; STD; VRL; 2735 BP. XX AC AY129663; XX DT 10-SEP-2002 (Rel. 73, Created) DT 08-DEC-2005 (Rel. 86, Last updated, Version 3) XX DE Yellowtail ascites virus - YT-01A putative RNA-dependent RNA polymerase DE (vp1) mRNA, complete cds. XX KW . XX OS Yellowtail ascites virus - YT-01A OC Viruses; Riboviria; Birnaviridae; Aquabirnavirus. XX RN [1] RP 1-2735 RX DOI; 10.1007/s00705-002-0951-y. RX PUBMED; 12664297. RA Zhang C.X., Suzuki S.; RT "Comparison of the RNA polymerase genes of marine birnavirus strains and RT other birnaviruses"; RL Arch. Virol. 148(4):745-758(2003). XX RN [2] RP 1-2735 RA Zhang C.X., Suzuki S.; RT ; RL Submitted (09-JUL-2002) to the INSDC. RL Center for Marine Environmental Studies, Ehime University, Matsuyama, Ehime RL 790-8577, Japan XX DR MD5; 20e593ebbf53c3e49e19865cd53c6315. XX FH Key Location/Qualifiers FH FT source 1..2735 FT /organism="Yellowtail ascites virus - YT-01A" FT /strain="YT-01A" FT /mol_type="mRNA" FT /isolation_source="isolated from yellowtail in Nagasaki, FT Japan" FT /db_xref="taxon:360001" FT gene 1..2735 FT /gene="vp1" FT CDS 79..2616 FT /codon_start=1 FT /gene="vp1" FT /product="putative RNA-dependent RNA polymerase" FT /note="viral protein 1" FT /db_xref="GOA:Q8BAD3" FT /db_xref="InterPro:IPR007098" FT /db_xref="InterPro:IPR007100" FT /db_xref="UniProtKB/TrEMBL:Q8BAD3" FT /protein_id="AAN04571.1" FT /translation="MSDIFNSPQNKASILSALMKSTAGDVEDVLIPKRFRPAKDPLDSP FT QAAAQFLKDNKYRILRPRAIPTMVELETDAALPRLRQMVDDGKLKDTVSVPEGTTAFYP FT KYYPFHKPDHDEVGTFGAPDITLLKQLTFFLLENDFPTGPETLRQVREAIATLQYGSGS FT YSGQLNRLLAMKGVATGRNPNKTPKTVGYSNEQLAKLLEQTLPINPPKNEDPDLRWAPS FT WLINYTGDQSTDKSYLPHVTVKSSAGLPYIGKTKGDTTAEALVLADSFIRDLGKAATSA FT DPETEVKKTITDFWYLSCGLLFPKGERYTQVDWDKKTRNIWSAPYPTHLLLSMVSSPVM FT EESKLNITNTQTPSLYGFSPFHGGMDRIMTIIRDSLDTGEDLVMIYADNIYILQDNTWY FT SIDLEKGEANCTPQHMQAMMYYLLTRGWTNEDGSPRYNPTWATFAMNVAPSMVVDSSCL FT MMNLQLKTYGQGSGNAFTFLNNHLMSTIVVAEWVKAGKPNPMTKEFMDLEERTGINFKI FT ERELKNLREVIMEAVETAPQDGYLADGSDLPPHKPGRAVELDLLGWSAVYSRQMEMFVP FT VLENERLIASAAYPKGLENKTLARKPGAEIAYQIVRYEAIRLVGGWNNPLLETAAKHMS FT LDKRKRLEVKGIDVTGFLDDWNNMSEFGGDLEGITLAEPLTNQTLIDINTPLESFDPKE FT RPETPRSPKKTLDEVTAAITSGTYKDPKSAVWRLLDQRTKLRVSTLRDQAAALKPASST FT VDNWAEATEELAAQQQLLMKANTLLKSSLTETREALETVQSDKIIAGKSNPEKNPGNAA FT NPVVGYGEFSEKIPLTPTQKKNAKRREKQRRNQ" XX SQ Sequence 2735 BP; 844 A; 781 C; 661 G; 449 T; 0 other; tggcacccga cataccacga ctgtttaggt atgcacgcaa gtgccccttt caaaacctct 60 acatttacaa ctcatgatat gtcggacatc ttcaactcac ctcagaacaa ggcgtcaatc 120 ttgagtgctc tcatgaaaag cacagcagga gatgtggaag acgtgctaat tccaaagcgc 180 ttccgaccag ccaaggatcc ccttgacagt ccacaagctg cagcacagtt cctaaaggac 240 aacaagtacc gcatacttag gccgcgagcc attccaacca tggtcgaact agagacagat 300 gccgctctgc ctcgactgcg acagatggtc gacgatggca agcttaagga cacggtaagc 360 gtcccagaag gaaccaccgc attctatcca aaatactacc cattccacaa gccagatcat 420 gatgaagttg gaacgtttgg ggctccagac atcacacttc tgaaacaact cacattcttc 480 ctactggaaa atgactttcc aacaggccca gagactttac ggcaagtcag agaagccata 540 gccacgcttc agtatggctc aggcagctac tcaggacagc taaacagact cctggcgatg 600 aaaggggttg caactggaag gaatccgaac aaaactccca agacagtggg ctacagcaat 660 gagcagctgg ccaaactcct tgagcagaca ctaccgatca accctccaaa gaacgaggac 720 ccagacctcc ggtgggcccc cagctggttg atcaactaca ccggagacca gagcaccgac 780 aagtcatatc tgccacatgt gactgtcaag tcctcagccg gcctaccata cataggcaaa 840 accaaaggag acacgactgc agaagcgctc gttctggctg actccttcat aagagacctc 900 ggaaaagccg caacatcagc tgatccagag acagaagtaa agaagaccat aactgacttc 960 tggtacctga gctgtgggct gctattccca aagggcgaga gatacaccca ggtggactgg 1020 gataagaaga cccggaacat atggagcgcg ccctacccaa cacacctatt gctatcaatg 1080 gtgtcatcac cggtgatgga agagtccaag ctcaacatca ccaacaccca gactccgtcc 1140 ctgtacgggt tctctccatt ccatggcggg atggacagaa taatgacgat cataagagac 1200 agtctggaca caggagagga cctggtgatg atctacgcag acaacatcta catactgcaa 1260 gacaacacct ggtactcaat cgacctagag aaaggtgagg ccaactgcac accacaacac 1320 atgcaggcca tgatgtacta cctgctaaca cgaggatgga caaatgagga tggctcaccc 1380 cgctacaacc caacatgggc gaccttcgcc atgaacgttg caccgtcaat ggttgtggac 1440 tcatcatgcc taatgatgaa cctgcaactc aagacatacg ggcaaggcag cggaaatgcc 1500 ttcacctttc tcaacaacca cctaatgtca acaatcgtag ttgccgagtg ggtaaaggcc 1560 ggaaaaccca accccatgac gaaagagttc atggacctcg aagagaggac tggaataaac 1620 ttcaagatcg agcgggaact caagaatcta cgggaagtca tcatggaggc cgtcgaaaca 1680 gcgccccagg acggctacct ggccgacggc tcagacctcc cgccacacaa acccgggaga 1740 gccgtggagc tagacctact cggctggtcc gcggtataca gccgacagat ggagatgttt 1800 gtgccagtcc tcgagaacga gcgactaatt gcatcagctg cctacccaaa gggtcttgag 1860 aacaagaccc tagccagaaa acccggggcc gagatcgcat accagatagt caggtatgaa 1920 gcgatccgcc tggtaggtgg ctggaacaat cccctgctag aaaccgccgc aaaacacatg 1980 tccctagaca agaggaagcg tctagaagta aagggcattg acgtcacggg gttcctggat 2040 gactggaaca acatgtcaga attcgggggt gacctcgaag ggataaccct agctgaaccc 2100 ctgacaaacc aaaccctgat agacatcaac acaccccttg agagctttga cccaaaagag 2160 aggcccgaaa cgcctcggtc acccaagaag actctggatg aggtaaccgc cgccataacc 2220 tccgggacct acaaggaccc caagagtgcc gtgtggaggc tgctcgacca gaggaccaag 2280 ctaagagtca gcacgctaag agaccaggca gctgccctca aaccagcatc atccacagta 2340 gataactggg ccgaagcaac ggaggaacta gcagcacaac aacagcttct catgaaagcc 2400 aacacgctgc tcaagagcag tctcacagag accagagaag cgctggagac cgtccagtca 2460 gacaaaatca tcgctggaaa atcgaacccc gagaagaacc ccggcaacgc ggccaacccc 2520 gtggttggct acggcgaatt cagcgaaaag attcctctaa ctcccacgca gaagaagaac 2580 gccaagcgaa gggagaaaca gaggcgcaac caataagaag acaaccggga agtatccgaa 2640 atgacctagc tggactcata tgtaagctcc gcgccgcacg gcaagctaaa caaaagtagt 2700 gaccctgaga gtgccaccaa catgacccta gataa 2735 //