ID AY184487; SV 3; linear; genomic DNA; STD; VRL; 2738 BP. XX AC AY184487; XX DT 15-APR-2003 (Rel. 75, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Squash leaf curl China virus - [Pumpkin :Coimbatore] segment DNA-A, DE complete sequence. XX KW . XX OS Squash leaf curl China virus - [Pumpkin: Coimbatore] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2738 RA Muniyappa V., Maruthi M.N., Babitha C.R., Colvin J., Briddon R.W., RA Rangaswamy K.T.; RT "Characterization of pumpkin yellow vein mosaic virus from India"; RL Ann. Appl. Biol. 142(3):323-331(2003). XX RN [2] RP 1-2738 RA Maruthi M.N., Briddon R.W., Colvin J., Muniyappa V.; RT ; RL Submitted (20-NOV-2002) to the INSDC. RL Plant, Animal and Human Health Group, Natural Resources Institute, RL University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB, UK XX RN [3] RC Sequence update by submitter RP 1-2738 RA Maruthi M.N., Briddon R.W., Colvin J., Muniyappa V.; RT ; RL Submitted (13-JAN-2005) to the INSDC. RL Plant, Animal and Human Health Group, Natural Resources Institute, RL University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB, UK XX RN [4] RC Sequence update by submitter RP 1-2738 RA Maruthi M.N., Briddon R.W., Colvin J., Muniyappa V.; RT ; RL Submitted (18-MAR-2005) to the INSDC. RL Plant, Animal and Human Health Group, Natural Resources Institute, RL University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB, UK XX DR MD5; 35445e0c9132c7a86ae0367cb61a6c8b. DR EuropePMC; PMC3125359; 21676270. DR EuropePMC; PMC3550763; 23637479. DR EuropePMC; PMC5142593. XX CC On Mar 18, 2005 this sequence version replaced gi:57639253. XX FH Key Location/Qualifiers FH FT source 1..2738 FT /organism="Squash leaf curl China virus - [Pumpkin: FT Coimbatore]" FT /segment="DNA-A" FT /mol_type="genomic DNA" FT /country="India:Coimbatore, Tamil Nadu" FT /isolation_source="pumpkin" FT /db_xref="taxon:320438" FT gene 121..459 FT /gene="AV2" FT CDS 121..459 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:Q5JC35" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5JC35" FT /protein_id="AAW55548.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLLEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIEGTPTSQLRQPLWSSCRCPHCPRHKSKGLDQQADEQ FT KTQNGQNV" FT gene 281..1051 FT /gene="AV1" FT CDS 281..1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q80G34" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q80G34" FT /protein_id="AAO91815.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMDRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1048..1458) FT /gene="AC3" FT CDS complement(1048..1458) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="REn" FT /db_xref="GOA:Q5JC34" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q5JC34" FT /protein_id="AAW55551.1" FT /translation="MITDSRTGEYITADRAEDGVYIWEVPNPLYFKITKHDIRPCLEEH FT DIIKVQIMFNHNLRKALGLHKCVLMFQIWTGLRPPIGIFLRVFKTQVLKYLDMLGVIGI FT YNVLRAVYHVLDNVLEKTIDVWTTYDVKLNLY" FT gene complement(1193..1597) FT /gene="AC2" FT CDS complement(1193..1597) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator" FT /note="TrAP" FT /db_xref="GOA:Q5JC33" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q5JC33" FT /protein_id="AAW55550.1" FT /translation="MQSSSQSKNHSIPVAKESLHPRKKKNIRRRRIDLPCGCSYYMSID FT CHDHGFTHRGIHHCGSSRGWRVYLGSSKSPIFQNNKTRYQTVSRRTRHNQSADNVQPQP FT AESTGASQMCSNVPNLDGLTPSDWDFLESL" FT gene complement(1500..2585) FT /gene="AC1" FT CDS complement(1500..2585) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /note="Rep" FT /db_xref="GOA:Q5JC32" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5JC32" FT /protein_id="AAW55549.1" FT /translation="MAPPRHFKISAKTISLTYPKCSITKEEALSQLRTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKKYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYARAINTGNKEDALKVLKELAPKDYVLQFH FT NMNSNLDRIFPPRAEVYISPFSVSSFDRVPPELVDWVSGNVVCSAARPIRPIGIVLEGD FT SRTGKTAWARSLGPHNYLCGHLDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLRNKGPNSSYKEYLDEEKNAALKQWALKNAIFITIEEPL FT YSGRERIASSEEEEEHQTQTN" FT gene complement(2252..2428) FT /gene="AC4" FT CDS complement(2252..2428) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q5JC31" FT /protein_id="AAW55552.1" FT /translation="MGLRISTFLSSSKESSSARIIDSSTWYPQVGQHISIRTFRELNRH FT LTSRNTSTKTVTC" XX SQ Sequence 2738 BP; 743 A; 589 C; 597 G; 809 T; 0 other; accgaatggc cgcccgattt ttttatgtgg gtcctcaacc aatgaaattc acgctacatg 60 tcttatttag tgtgtgggga ccaataaata gacttgctca ccaagtttgg atctacaaac 120 atgtgggatc cattattgca cgaatttcct gaaagcgttc atggtctaag gtgcatgcta 180 gctgtaaaat atctcctaga gatagaaaag aactattcac cagacacagt cggctacgat 240 cttgtgcgag atctcattct tgttcttcga gcaaagaact atggcgaagc gaccagcaga 300 tatcatcatt tcaacgcccg catcgaaggt acgccgacgt ctcaacttcg acagccccta 360 tggagctcgt gccgttgtcc ccattgcccg cgtcacaaaa gcaaaggcct ggaccaacag 420 gccgatgaac agaaaaccca gaatggacag aatgtatagg agtcccgacg tgccaagggg 480 ctgtgaaggc ccttgtaagg tgcagtcctt tgaatctagg cacgatgtct ctcatattgg 540 caaggtcatg tgtgttagtg atgttacacg aggaaccgga ctcacacatc gcgtagggaa 600 gcgattctgt gtgaaatccg tctatgtgct ggggaagata tggatggatg aaaacatcaa 660 gactaaaaac catactaaca gtgtcatgtt ttttttggtt cgtgatcgtc gtcctacagg 720 atctccacaa gattttgggg aagtctttaa catgtttgat aatgaaccga gcacagcaac 780 ggtgaagaat atgcatcgtg atcgttatca agtcctacgg aagtggcatg cgactgtgac 840 gggaggaacg tatgcttcta gagagcaagc attagttagg aaatttgtta gggttaataa 900 ttatgttgtc tacaatcaac aagaagccgg caagtatgag aatcatactg aaaatgcatt 960 aatgttgtat atggcttgta ctcacgcatc gaaccctgta tacgcgactt tgaaaatccg 1020 gatctatttt tatgattcgg taacaaatta atataagttc aatttcacat catatgttgt 1080 ccatacatca attgtctttt ccaatacatt atccaacaca tgataaactg ctcttaatac 1140 attataaata ccaatcaccc ccaacatatc caggtactta aggacctggg tcttaaagac 1200 tctcaagaaa atcccaatcg gagggcgtaa gcccgtccag atttggaaca ttagaacaca 1260 tttgtgaagc cccagtgctt tccgcaggtt gtggttgaac attatctgca ctttgattat 1320 gtcgtgttct tctagacacg gtctgatatc gtgttttgtt attttgaaat ataggggatt 1380 tggaacttcc cagatataca cgccatcctc tgctcgatcc gcagtgatgt attcccctgt 1440 gcgtgaatcc gtgatcatgg caatctattg acatgtaata cgagcatccg cacggtagat 1500 caattcgtct gcgtctgatg ttcttcttct tcctcggatg aagcgattct ttcgcgaccg 1560 gaatagagtg gttcttcgat tgtgatgaag attgcattct ttaatgccca ctgcttcagt 1620 gctgcatttt tctcttcatc gagatactct ttgtaactgc tgtttggtcc tttattgcgg 1680 aggaagatgg tgggaattcc acctttaatc atgactggct ttccgtactt cgtgttactt 1740 tgccagtctc tctgggcccc catgaattct ttaaaatgct ttagatagtg gggatcaacg 1800 tcatcaatga cgttgtacca agcatcatta ttgtacactc tcgggcttag atctaggtgg 1860 ccgcacagat aattgtgcgg tcccaaagaa cgcgcccacg cagttttgcc cgttctacta 1920 tcaccctcta aaactattcc tatgggtcta atcggccgcg cagcggaaca taccacatta 1980 cctgaaaccc aatcgacgag ttctggcgga actctgtcga acgatgaaac tgaaaaagga 2040 gaaatataca cctcagctcg aggtggaaaa atgcgatcta aattggaatt catattatga 2100 aattgcaaaa cataatcttt gggtgctaat tctttcaata ctttcaatgc atcttcctta 2160 ttccctgtat ttattgccct tgcgtatgcg tcgttggctg tttgttgacc tccacgagca 2220 gatcggccat cgatctggaa gacaccccat tctaacacgt caccgtcttt gtcgatgtat 2280 ttcttgacgt cagatgccga tttagctccc tgaatgttcg gatggaaatg tgctgaccga 2340 cttggggata ccaagtcgaa gaatctatta ttcttgcact ggaactttcc ttcgaactgg 2400 ataagaacgt ggatatgcgg agacccatct tcgtgcaact ctctgcaaat tttgataaat 2460 ttcttcgaag ttggagtttc tagggttctc aattgggaaa gtgcttcttc tttggttata 2520 gagcactttg gatatgtgag ggaaatagtt ttcgcactta ttttgaaatg cctaggagga 2580 gccatcaaaa cgcgcgtttt gattcggggt ctctccaaaa ctatggtata ttggggtatg 2640 gggtctcata tatactttgg acaccaaatg gcaaaatggt aattatgcaa ataattactt 2700 taattcaaaa tgaataaagc ggccattcgt ataatatt 2738 //