ID   AY685218; SV 1; linear; genomic RNA; STD; VRL; 1560 BP.
XX
AC   AY685218;
XX
DT   23-AUG-2004 (Rel. 80, Created)
DT   23-AUG-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Spiranthes mosaic virus 3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Spiranthes mosaic virus 3
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1560
RA   Guaragna M.A., Ndum O., Jordan R.;
RT   "Detection and characterization of two previously undescribed potyviruses
RT   in the terrestrial orchid Spiranthes cernua";
RL   Acta Hortic. 0:0(2004).
XX
RN   [2]
RP   1-1560
RA   Jordan R.;
RT   ;
RL   Submitted (13-JUL-2004) to the INSDC.
RL   Floral & Nursery Plants Research Unit, US National Arboretum, USDA-ARS,
RL   10300 Baltimore Ave, Beltsville, MD 20705, USA
XX
DR   MD5; 393a81469d7d2abc65d5c48c28ba455a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1560
FT                   /organism="Spiranthes mosaic virus 3"
FT                   /host="Spianthes cernua 'BR'"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:290031"
FT   CDS             <1..1434
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q68KG8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q68KG8"
FT                   /protein_id="AAT99070.1"
FT                   /translation="GQPSTVVDNTLMVILAMYYTLMSCEVPISECIFFVNGDDLLIAIN
FT                   PLYADRLSQFSGYFRQLGLKYDFSNTTSDKTQLWFMSHRALHHDGMLIPKLEPERIVSI
FT                   LEWDRSSEPTHRLEAICAAIIESWGYTELTHEIRKFYAWVLEQAPYKQLAQAGCAPYLA
FT                   ETALRHLYTGHRASEEELLRYVTCFGSEFAEHEDESITLQSGTPGESQINAGDQKDKKD
FT                   KKISDSATPQEKQAIESRKDRDVNVGTSGTFSVPRVQMTAKKMNLPKSKQKKIVNLDFL
FT                   LAYKPEQSDISNKRASHAQFTAWVTAVQEAYDVSDEQLQILMDGLMVWCIENGTSHKLT
FT                   GNWTMMDGADQVEYPLEPVIANAKPTLRQIMAHFSDLAEAYIKMRNSDRSYMPRYGLQR
FT                   NLTDMSLSQYAFDFYEVTSRTPIRAREALTQMKAAAVGNTTNRMFGLDGNLTNTEEDTE
FT                   RHTAQDVNRHMHTLLGVRQ"
FT   mat_peptide     1..609
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     610..1431
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1435..1560
XX
SQ   Sequence 1560 BP; 468 A; 336 C; 368 G; 388 T; 0 other;
     gggcagccat ccactgttgt cgacaacaca ctgatggtga ttctcgccat gtattacacc        60
     cttatgtcat gtgaagtccc aatctctgag tgtatattct ttgtgaatgg ggatgatttg       120
     ctgatagcaa tcaatccact ctatgctgat cggctatctc agttttctgg gtactttcgc       180
     caacttggtc tgaaatatga cttcagcaac acgacaagtg acaagaccca actgtggttt       240
     atgtcacatc gagcattgca tcacgatggg atgctcattc caaagctcga accggagaga       300
     attgtgtcta tactcgagtg ggataggtcg agcgagccga cgcatcgtct cgaagccata       360
     tgtgctgcca taattgaatc atggggctat acggagttaa ctcatgaaat tcgcaagttc       420
     tatgcgtggg ttctagaaca ggccccgtat aagcaacttg cccaagctgg ttgtgctcca       480
     tatttagccg agacagcctt aaggcaccta tacacaggac acagggctag tgaggaagaa       540
     ctactcaggt atgtcacatg ctttggttca gaatttgctg agcatgagga tgagtcgata       600
     acgctccaaa gtggaacgcc aggcgaatca caaattaacg ctggggatca aaaagataag       660
     aaagacaaaa agatcagtga ctcagccaca ccccaggaga agcaagccat tgagtcgaga       720
     aaagacaggg atgtcaatgt tggcactagc ggcacgttta gtgttccgag ggtgcaaatg       780
     acagcaaaga aaatgaactt gccaaagtcg aaacagaaaa agatagtcaa tcttgacttt       840
     ttgctggctt acaaacctga acaaagtgat atctctaaca agagagctag tcatgcacaa       900
     ttcaccgcat gggtcacagc agttcaagaa gcatatgacg tgtcagacga gcagttgcaa       960
     atactcatgg atggcttgat ggtttggtgt attgaaaacg gaacttcaca caaactcaca      1020
     ggcaattgga ctatgatgga tggtgcggac caagtcgaat atccgctaga gcctgtcatt      1080
     gctaatgcca aaccaacatt gcggcaaata atggcacatt ttagcgatct agcggaagct      1140
     tatatcaaga tgagaaatag cgatcgcagt tatatgcctc gctatggcct tcaaagaaac      1200
     ctgactgata tgagcttaag tcagtacgcg tttgattttt acgaggttac atcacgtacg      1260
     ccaatacgtg ctcgtgaagc gctaacgcaa atgaaagcag cagctgttgg aaacacaaca      1320
     aacagaatgt ttggccttga tggcaatttg accaacactg aagaggatac ggaacgacat      1380
     acggcacaag atgtcaatcg ccacatgcac accttactag gtgtgcgtca gtgattaaca      1440
     cgtctatcct tgctttcgca gaagcataat taatgttata ttcatgtttc tgtctctcta      1500
     cctacacttg gtgccatagt gatgttcaca tcgaggtttt caatggtttg tagagcgaga      1560
//