ID AY781171; SV 1; linear; genomic RNA; STD; VRL; 5815 BP. XX AC AY781171; XX DT 26-SEP-2005 (Rel. 85, Created) DT 26-SEP-2005 (Rel. 85, Last updated, Version 1) XX DE Broad bean wilt virus 1 isolate Ben segment RNA 1, complete sequence. XX KW . XX OS Broad bean wilt virus 1 OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Fabavirus. XX RN [1] RP 1-5815 RX DOI; 10.1007/s00705-005-0582-1. RX PUBMED; 15986170. RA Ferrer R.M., Guerri J., Luis-Arteaga M.S., Moreno P., Rubio L.; RT "The complete sequence of a Spanish isolate of Broad bean wilt virus 1 RT (BBWV-1) reveals a high variability and conserved motifs in the genus RT Fabavirus"; RL Arch. Virol. 150(10):2109-2116(2005). XX RN [2] RP 1-5815 RA Ferrer R.M., Guerri J., Luis-Arteaga M.S., Moreno P., Rubio L.; RT ; RL Submitted (14-OCT-2004) to the INSDC. RL Instituto Valenciano de Investigaciones Agrarias (IVIA), Cta. RL Moncada-Naquera km. 5, Moncada, Valencia 46113, Spain XX DR MD5; 1d13e36f2a709298176070d0e3c02464. XX FH Key Location/Qualifiers FH FT source 1..5815 FT /organism="Broad bean wilt virus 1" FT /segment="RNA 1" FT /host="Capsicum annuum" FT /lab_host="Nicotiana megalosiphon" FT /isolate="Ben" FT /serotype="I" FT /mol_type="genomic RNA" FT /country="Spain" FT /db_xref="taxon:50817" FT CDS 198..5726 FT /codon_start=1 FT /product="polyprotein 1" FT /db_xref="GOA:Q3MKX9" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:Q3MKX9" FT /protein_id="AAX12375.1" FT /translation="MDSETIDMCVKFLKISFGLQSLKDLVKELFGNSEMEKLAYVHAAF FT FHANEMALHWNTSLPWEEMMSSRRIKERFSYVKCHFLKNIVCNADAAGQMIHYNTTTCE FT QWFCCNFNLASYGTDYPSLVPEEGSGVPTNEEAEIKIGQSLVTCAQSVTKAIYAKLTTF FT TTRTIQSFLECLKDAICGAFSSWLPCIKGAFAWFGNIIEVLKHWAGAVHEKLHNFLEGI FT EDCIYMGMGLVASTCIVALIEKFLVTMSVISAPVGAPTLFLTSAMAVISSCYLLSKAVE FT KSAAFTMLLGFVTQSCQTVLGNLFGKSAKGSEESQGQFGPTTMLESLATLVSSWSSSSV FT TEVGRTFGAISQIKNGIIALKDMVLFVFGKLCEMASKVLGFESQILADLSIILGENVAD FT WLDECDCMLAYLLEFNSNARDIFDRLSQLIEKGKAIRMGILRTTHRGSSQVLSLVTEAL FT DKLTELHNSVIMSGANSTRKTPFMLFFTGKSGVGKTSVVQRMAANWLQQEQLGSNEVYS FT RNGLDPFWSGYKRQAVVTYDDFGAVPGNVSNEAEIINVVSSNPHSVMMADLKEKGMYFD FT SRLIIASSNFLAANPESGVHDSEAYERRRHVVVQVSLKEDVAYDPGNPCANQRYTLLDS FT KAPFAERAVFETYEELWSHVYNAFKAHEERERMFLASLPIPERSEKEALQALIGICVMT FT TSYAPKAVIQYGIDHLVGYHYLISSAEHVYFWHEKGDVEIVPMHLLKLDKMDRATMAST FT SLKSALMCQDMAKNFPTLNPLAVLYAKNIVIRGWVDANLHASKKCDDAYMREQIEALPK FT WQRAYLHVLSGHIASNEARGWFSNCLNTTRSNLRNSYIWEYKSWPMPLKLAIGSFLAIF FT AGSAIFCSLQSLWCMSGSASFVAGAASVFTVGSATAQSAPPNKDGSEYTYRNKKIRIRN FT WEGQSPCFGDSALWIAENCMATLVVLQNRVQVCMAPGRSFLGVNHFLRMIPNGVMVKLE FT TGITETYFVWEKSKLMVSENSEIALYTSANLPKAPDSLVDRFHFDLETLPKTFPAQFFT FT YKYDKDVQQYIPELGELMCKKAERALCVVSGEYRRVISHHLYDKNPTVAGDCGGLVLAT FT IEGKCKLVGLHVASDGEEGAASPTPWDPNFKVAQGQSDFLLNYEEWAIPKVLGPGCKAI FT GIIAPEHTVGSGGKTSYLETPVEWQLNKPCGKIPSILIKGDVRLAGTENADYDPFAVGM FT TKYAKEAGPFEVCGLDKVCESIVETWHDASDGFEFGPVDLETALNGIENMEYFDALVLS FT TSEGYPYRLDRKPGEKGKARYVEGEPGSMEITDERILADIHWFEEISKTQVPDLYCIEC FT VKDERLPIRKVLKEPKSRLFTVLPMSYNLAVRKKFLNFVRFIMKRRDVLPCQVGINPYS FT RQWGKVADRLLEKGNSILCCDYSRFDGFLPKCIMVKIAEMFSNVVGETGESREQTKNLM FT LACCSRYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFD FT THVAMAVYGDDNLISVSEAISSRFNGNFLVNFMANLGIKVTDGVDKTKIGIEFRTIENC FT DFLKRRFKENTDGTWSGVMAEEHLWPQLHFVKAKKVEMSEAYISNCNNILRELWLEDPG FT KAATFRREVISKLKWVEPQRLLTVSQVALFHSEQMNGEHPFVDACHQLENLELMAPLEP FT GMLPIKTQEILPGLYVASEKNFTGDFDDYFTISITTNRKFEEGKGFHIVFPYGAGRGGL FT PSKSFMEQNVIRKGCAIQKAFKLGLERGNKMLFISQSSVIPAYVFAIMLYRSVDRLPRA FT LSNKALTSAIGICKKLSYLPKDFPDLF" FT mat_peptide 198..1151 FT /product="protease cofactor" FT mat_peptide 1152..2921 FT /product="NTP-binding domain" FT mat_peptide 2922..2999 FT /product="VPg" FT mat_peptide 3000..3623 FT /product="protease" FT mat_peptide 3624..5723 FT /product="RNA-dependent RNA polymerase" XX SQ Sequence 5815 BP; 1628 A; 1019 C; 1448 G; 1720 T; 0 other; tgatttaaaa aatttttaaa tcaaacagct ttcgttcgga attaaaacag ctttctttca 60 aacagctttc ggatacttaa acagctttca ctttgtcttg catcttttgc tttgaacccg 120 gaaaaaggga gtgtgattaa aagcgcacca tatacttgca aaagttgtcg cgatttcatt 180 tgatctcatt ttgaaaaatg gattctgaga ctattgacat gtgtgtgaaa tttcttaaga 240 tttcttttgg gcttcagtct ttgaaagatc tcgtgaagga attatttgga aattctgaaa 300 tggagaagct agcttatgta catgctgctt tcttccatgc caatgaaatg gcactccatt 360 ggaatactag ccttccttgg gaggagatga tgtcttctag gagaattaag gaaagattca 420 gttatgtcaa gtgccatttt ctgaagaaca ttgtgtgtaa tgctgatgct gctggccaaa 480 tgattcatta caataccacg acttgtgagc agtggttttg ttgtaatttc aatctggcat 540 cgtatggaac tgattatcca agtctagtgc cagaagaggg cagcggtgtg cctaccaatg 600 aagaggcaga gattaaaatt ggacaatctc ttgtaacttg tgctcagagt gtgactaagg 660 ccatttatgc taagttaaca acgttcacaa ctcgcacaat acaaagtttc ttggagtgtc 720 ttaaagatgc aatttgtggg gccttttctt catggctccc ttgcatcaaa ggcgccttcg 780 catggtttgg taatatcatt gaagtgctga agcattgggc aggggctgtg catgagaaat 840 tgcataactt cttagaagga attgaagatt gcatttacat gggcatgggt ttggtagcct 900 ctacgtgtat tgtggccctc atagagaaat ttctcgtgac tatgtcggtc attagcgcac 960 ctgttggtgc accaactctt tttcttacat ctgctatggc agtgatttct tcctgttacc 1020 ttttaagtaa ggctgtggaa aagtctgctg ctttcacaat gcttttagga tttgttaccc 1080 aaagttgcca gacagtcttg ggtaatctct ttggcaaatc tgccaaagga tcagaggaat 1140 cccagggaca atttggccca accactatgc tagagagttt agccactttg gttagttcgt 1200 ggtcgagcag ttctgtcaca gaagtaggac ggacatttgg agctatttcc caaatcaaaa 1260 atgggattat agcacttaag gacatggttt tgtttgtgtt tggaaaattg tgtgagatgg 1320 caagcaaagt tttgggtttt gagtcccaga tactggctga tctctctatc attctgggcg 1380 aaaatgtggc agattggctt gatgagtgtg attgtatgct tgcgtatttg ctagaattta 1440 attcgaatgc gagagatata tttgatcgct tatctcaact tatcgagaaa ggaaaagcaa 1500 tacgcatggg aatcctacga accactcata gagggtcttc acaagttcta agcttggtca 1560 ccgaagctct tgataaattg acagaattac ataactctgt gataatgtcg ggagcaaatt 1620 ccacgaggaa aacgcccttc atgcttttct tcacagggaa atcaggtgtg gggaagacgt 1680 cagtggtcca gcggatggca gcaaattggt tgcaacaaga acaactggga tccaatgaag 1740 tctattcgcg taatggactt gacccatttt ggtctgggta caagcgccaa gcagttgtca 1800 catacgatga ttttggagca gttccgggca atgtgtccaa tgaggctgaa attatcaatg 1860 ttgtttctag caaccctcac tctgtcatga tggcggatct gaaagagaaa ggcatgtact 1920 ttgattctcg gctgataatt gcgagtagta actttttggc agccaatcca gagtcaggag 1980 ttcatgattc tgaggcctat gagaggagaa ggcatgtggt cgtgcaggtt tctctaaaag 2040 aggatgtggc ttatgatcct gggaatccat gtgccaatca aaggtacacc ttgttggatt 2100 ccaaggcccc atttgcagaa agagctgtat ttgaaacata tgaggagctc tggtcgcacg 2160 tttacaatgc ttttaaagca catgaggaga gagagaggat gtttctggca tctttgccca 2220 taccagagag gagtgagaaa gaggctttgc aagcactcat agggatttgt gttatgacca 2280 cttcttatgc acccaaagca gtgattcaat atgggattga tcacttagtg ggatatcact 2340 atttgatctc tagtgctgag catgtttact tttggcatga gaaaggggac gtggaaattg 2400 ttccaatgca tttgttgaaa cttgataaaa tggatagggc taccatggca agtactagtt 2460 tgaagagtgc cctgatgtgt caggatatgg caaagaattt tcccactctg aatcccttgg 2520 cggttctcta tgcaaaaaat atagtgatta ggggatgggt tgatgcaaat ttgcatgctt 2580 ccaagaaatg tgatgatgct tacatgcgag agcagataga agccttgcct aagtggcagc 2640 gtgcttattt gcatgtcctg agtggacata tagccagtaa cgaggctagg ggttggttct 2700 cgaattgtct caacactaca aggagcaact tgcgaaactc ttacatttgg gaatacaaaa 2760 gctggcccat gcctttgaaa ttggccattg gttcattttt ggccattttt gctggaagtg 2820 ctatattttg ctctttgcaa tctttgtggt gcatgtctgg aagtgcgtct tttgtagctg 2880 gggcagcttc tgtatttaca gttggctccg cgacagcaca aagtgcgccg cccaacaagg 2940 atggttcaga gtatacatat aggaacaaga aaataaggat taggaactgg gaaggtcaaa 3000 gtccatgctt tggagattca gccttgtgga tagcagaaaa ctgtatggct accctagttg 3060 tcttgcagaa cagggtacaa gtgtgcatgg ctccagggag gagtttttta ggagttaacc 3120 acttcttaag aatgattcca aatggagtta tggtgaagct tgagactggg ataactgaga 3180 cttattttgt gtgggagaag tctaagttga tggtatctga gaattctgaa atagctctct 3240 acacgtcggc taatttgccc aaagccccag acagtttggt tgatagattc cactttgact 3300 tggagacatt gcccaaaact tttcctgcac agtttttcac atacaaatat gacaaggatg 3360 tgcagcaata cattccagaa cttggagagc tcatgtgtaa aaaggcagaa agagccttat 3420 gtgttgtgtc tggagagtac agaagagtga tttcacatca cttgtacgac aagaatccta 3480 ctgtagcagg agattgtggt gggttagtac ttgccaccat tgagggaaaa tgcaagcttg 3540 ttggattgca tgttgcttca gatggagaag agggagcagc tagtccaaca ccatgggacc 3600 ccaattttaa agttgctcag ggtcaatctg atttcctgtt aaattatgaa gaatgggcaa 3660 ttccaaaagt gttaggtcct ggttgcaagg ctattggaat cattgctcct gagcacactg 3720 taggctctgg cggcaagacg agctatttgg aaacacctgt tgagtggcaa cttaacaaac 3780 cttgtggcaa aattcctagt atccttatca aaggagatgt tagattggca ggcacggaga 3840 atgcggatta cgatcccttt gcagttggaa tgaccaagta tgccaaagaa gccggtcctt 3900 ttgaagtttg tggtctagat aaagtttgtg aatctattgt ggagacatgg catgatgcta 3960 gtgacggctt tgaattcggt cctgtggatt tggaaacagc tctgaatgga attgaaaata 4020 tggagtattt tgacgctctg gtattaagca cttcagaagg ttacccatac agacttgaca 4080 ggaagccagg agagaaaggc aaagccaggt atgtagaagg agaacctggt agcatggaaa 4140 tcactgatga gagaatctta gctgatatac actggtttga ggaaattagt aaaacgcaag 4200 tcccagattt gtattgcatt gagtgtgtca aggatgaaag gctacctatc cggaaagtgc 4260 ttaaagaacc caaaagccgc ctgtttactg ttttacccat gtcatacaat ttggctgtaa 4320 ggaagaagtt cttgaacttt gtcagattca tcatgaagcg tagggacgtt cttccttgcc 4380 aagttggcat taatccctat tccaggcaat ggggtaaagt ggctgacaga ttacttgaga 4440 aaggaaactc aatcttgtgc tgtgattaca gcaggtttga tggtttcttg cctaagtgta 4500 tcatggtcaa aattgctgaa atgttctcca atgtggtggg agaaactgga gaaagcaggg 4560 aacagacgaa gaatctcatg ttggcttgct gtagcagata tgccatatgt ggtcgggttt 4620 tgtacagagt tgagaatggt atcccatcag gatttccttt gactgtcatt gttaattcaa 4680 tactcaatga aattttgatc aagtatgcct actggaagtg ctttgaaaca gagagtttga 4740 taagagatca ttttgacaca cacgtggcaa tggcggtcta tggtgatgat aatttgatat 4800 ctgtgtcgga ggcgatttcg agtaggttca atggcaattt tctcgtcaat tttatggcca 4860 atttgggcat caaagtcaca gatggagtgg ataaaacaaa gattggcatt gaattcagaa 4920 ccattgagaa ttgtgatttt ctcaagagaa ggtttaaaga aaatactgat ggaacatggt 4980 ctggcgtgat ggcagaggag catttgtggc cgcaattgca ttttgtcaag gccaagaaag 5040 tggagatgag tgaagcctac attagcaatt gcaacaatat tcttcgggag ttatggcttg 5100 aggaccctgg gaaagctgca acctttagga gggaagtcat ctcaaagctg aaatgggtgg 5160 aaccccaaag gttactgact gttagccagg tagcattgtt ccacagcgag caaatgaatg 5220 gtgaacatcc ttttgttgat gcctgtcacc aacttgagaa tttggagctc atggctcctt 5280 tggaaccagg tatgctccca attaagacac aagagatact gcctggtttg tatgtggcat 5340 cagagaaaaa tttcactggg gattttgatg actattttac catttccatt actactaata 5400 ggaaatttga ggaaggaaag ggctttcaca ttgttttccc atatggagca gggagagggg 5460 gcttgccatc caagtccttt atggagcaga acgtcattag gaaaggttgc gccattcaaa 5520 aagctttcaa gttaggcttg gaaagaggga ataagatgtt gtttatttct cagagttcag 5580 tgataccagc ttatgttttt gctattatgc tttatcgctc agtagatagg ttgcccagag 5640 ccttgagcaa caaagcgcta actagtgcta ttgggatttg taagaagttg agctatttgc 5700 ccaaagactt cccagatctt ttttaaatgt taaatctatt ttgtttagtg tgcttatttt 5760 agagtgccgg gttgaaacgc ctttttcctc aggaaaatag tttacttaat agagg 5815 //