ID D84411; SV 1; linear; genomic RNA; STD; VRL; 4609 BP. XX AC D84411; XX DT 09-MAY-1996 (Rel. 47, Created) DT 09-JUN-2006 (Rel. 88, Last updated, Version 9) XX DE Beet necrotic yellow vein virus genes for 42k protein, 13k protein, 15k DE protein, 14k protein, 75k protein, complete cds. XX KW . XX OS Beet necrotic yellow vein virus OC Viruses; Riboviria; Benyviridae; Benyvirus. XX RN [1] RP 1-4609 RA Kiguchi T.; RT ; RL Submitted (12-APR-1996) to the INSDC. RL Tadahiko Kiguchi, Hokkaido Central Agricultural Experiment Station, Plant RL Biotechnology; Higashi 6 Kita 15, Naganuma, Hokkaido 069-13, Japan RL (Tel:81-1238-9-2001, Fax:81-1238-9-2060) XX RN [2] RX DOI; 10.1007/BF01718223. RX PUBMED; 8973531. RA Saito M., Kiguchi T., Kusume T., Tamada T.; RT "Complete nucleotide sequence of the Japanese isolate S of beet necrotic RT yellow vein virus RNA and comparison with European isolates"; RL Arch. Virol. 141(11):2163-2175(1996). XX DR MD5; 1b530b2bf62ba114906afb7a38b167cd. XX FH Key Location/Qualifiers FH FT source 1..4609 FT /organism="Beet necrotic yellow vein virus" FT /lab_host="Tetragonia expansa" FT /isolate="S" FT /mol_type="genomic RNA" FT /clone="145-1, H20, S4, S7, pMPCRD5, pMPCRSX19, pMRP70, FT pMSD25" FT /db_xref="taxon:31721" FT 5'UTR 1..144 FT CDS 145..2217 FT /transl_except=(pos:709..711,aa:OTHER) FT /product="75k protein" FT /note="readthrough product" FT /db_xref="GOA:O11840" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/Swiss-Prot:O11840" FT /protein_id="BAA18968.2" FT /translation="MSSEGRYMTWKDMSHNKFMTDRWARVSDVVSVIKQSHAMDLSKAA FT NLSIIKTALAGLGSGWTDNNPFVSPMTRFPQTLTMYGALVLYVNLSDPEFALIMTKVST FT LTDSGLADNASANVRRDVVSGNKAESSGKTAGTNENSAYTLTVSLAGLAQALRLEELMW FT TRDKFEDRLKLPWTPVQGRTSPPGQXQLAAARVTAHIRAAKRALLYPGDSPEWVGWKHF FT YPPPPYDVYDVPPLDIINAKLAADDIGGLVTPTPASSHGLPFEVSEEVEQANRNSLWLT FT VGLLLAALAVGIGVAAYHRKKLQSRLRELKLLWGSTGGSGGGGGFDTELYMRATDTVSL FT GTTLSEHAASAPSGLRHRPAATDSGPHEALPFEVWVFDNLAVVYDSIGMSDLFYTVREF FT VGVFNGEFEGLIELLESPDDDDGVYTNAPRDTAIDAYESQENYDRIDIETVLIERRINL FT KKLLLEEAELERRERDMTMIADEEQRTLLHRLESSRVEATHAVAKAEADARAAVAMAAL FT ASKEANDYDSKMAFDRSCKEQELRLRELEVNSMPSKTERYVHTGIQGGAQLAGAMAVGA FT MLRRGAGSSSQTVSSGANIGSRSQSLTRGRSASQPLSSVGGSTRGVNNNISNTNLVRAG FT NSAEVSAGRSTNSGNSNFWSKLRVGEGWSKYSVERAATRAQRAIVLPAPPSAPAG" FT mat_peptide 145..708 FT /product="coat protein" FT mat_peptide 712..2214 FT /product="pot. 54k protein" FT CDS 2130..3284 FT /product="42k protein" FT /db_xref="GOA:Q65674" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:Q65674" FT /protein_id="BAA12342.1" FT /translation="MVQVQRRTGGDKGAKGNRASSAPVRSRRMTQDDWSRTHPDDIFSV FT IEKTLVEDGYKWNGVKPGHCDWGKLKESGAIDNFRGTLEGELGKNCDLTCNAAAVKLDT FT LQKVKMSSDWTARVGIVLGAPGVGKSTSIKNLLDKFGAKHKMVLCLPFSQLLEGVFAGR FT LDTFLVDDLFCRSVGYGKYNTMLVDEVTRVHMCEILVLAGHLGVKNVICFGDPAQGLNY FT KAGSAVNYNFPIIAECYASRRFGKATADLINSSNGGGKPVVGNNEVKDSWTFEELCGKI FT LDMSTVLVATRETQKFLLEDNIESILYSDAHGQTYDVVTIILEDEFDDAAICDPNVRAV FT LLTRARKGGMIKMGPNIAARFKNGDFNSRGVSKSCTGDTFCEDR" FT CDS 3284..3640 FT /product="13k protein" FT /db_xref="GOA:Q65675" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/Swiss-Prot:Q65675" FT /protein_id="BAA12343.1" FT /translation="MSREITARPNKNVPIVVGVCVVAFFVLLAFMQQKHKTHSGGDYGV FT PTFSNGGKYRDGTRSADFNSNNHRAYGCGGSGGSVSSRVGQQLVVLAIVSVLIVSLLQR FT LRSPPEHICNGACG" FT CDS 3624..4022 FT /product="15k protein" FT /db_xref="GOA:Q65676" FT /db_xref="InterPro:IPR010470" FT /db_xref="UniProtKB/Swiss-Prot:Q65676" FT /protein_id="BAA12344.1" FT /translation="MVLVVKVDLSNIVLYIVAGCVVVSMLYSPFFSNDVKASSYAGAVF FT KGSGCIMDRNSFAQFGSCDIPKHVAESITKVATKEHDADIMVKRGEVTVRVVTLTETLF FT IILSRLFGLAVFLFMICLMSIVWFWCHR" FT CDS 4034..4423 FT /product="14k protein" FT /db_xref="InterPro:IPR009884" FT /db_xref="UniProtKB/Swiss-Prot:Q65677" FT /protein_id="BAA12345.1" FT /translation="MSMGMVDSLCVFVGRVITEGSESVEGVERFSIKFSDWKLFTTAVY FT VEYRQLGEKECSLKDVGRLHFNMSCVKCCQKLKCKKQNKNHSKHVQNGYLRKVRNFSIL FT GVCGDCCESFTLADEKHHVIVDPEV" XX SQ Sequence 4609 BP; 1187 A; 765 C; 1221 G; 1436 T; 0 other; aaattctaac tattatctcc attgaataga atttcaccgt ctgttggttc ttattttgtt 60 ctgggggcaa ttttattcag ggccctactt taaatatagg tgcgagtaat aagtagccgc 120 cgtccagaag aagatagtac taacatgtcg agtgaaggta gatatatgac atggaaggat 180 atgtcacata ataagtttat gaccgatcga tgggcccgtg tttcggacgt cgtgagtgtt 240 attaaacaat cgcatgctat ggacttgtcc aaggctgcga atctatctat aattaaaact 300 gctttggcag gattgggctc gggttggact gacaataatc cttttgtgtc cccgatgacc 360 cgttttccac agacactaac tatgtacggt gcacttgtgt tatatgttaa tctgtctgac 420 ccagaatttg cgttgataat gactaaggta agtactttaa ctgattcagg gttagcagat 480 aacgcatctg ctaatgtgcg tagagatgtg gtgtccggaa ataaagccga atcatccggt 540 aaaactgctg gcactaatga gaattctgct tatacgctta ccgttagtct tgctggtttg 600 gctcaagctc ttaggcttga ggaattaatg tggactcggg ataagtttga ggaccggttg 660 aaattaccat ggacacctgt tcaaggtaga accagtccac ccggacaata gcaattagct 720 gctgctcggg tgacggcaca cattcgagcg gcgaagcggg cactattata tcctggtgat 780 agtcccgagt gggttggttg gaaacatttc tatcctcctc caccatatga tgtgtacgat 840 gtgccaccgc tggatattat taacgccaaa ttggctgctg atgatatcgg cggtcttgtt 900 actcctacac cggcatcctc acatggtctt ccttttgaag tttccgagga agttgagcag 960 gcaaatagga atagtctatg gctaacagtt ggactgctat tagctgcttt ggcagttggg 1020 attggtgtag ctgcttatca taggaagaag ctccaaagta gattacgtga gttgaagttg 1080 ctatggggtt ctactggtgg gtctggtggt ggtggtggtt ttgacaccga gctgtatatg 1140 cgtgctacag atactgttag tttgggaacc actctttcag agcatgctgc ttcagctccg 1200 tcggggttac ggcaccgacc tgctgctact gatagtggac ctcatgaagc gctgccgttc 1260 gaggtgtggg tgtttgataa tctagctgta gtgtatgatt cgattggtat gagtgattta 1320 ttttatactg ttagagagtt tgttggggtg ttcaacggtg agtttgaagg gcttatagag 1380 ctgttagagt cacccgatga tgatgatggt gtgtatacga atgctcctag agacactgcc 1440 attgacgcct atgaatctca agaaaactac gaccgtattg atattgaaac tgtcttgatc 1500 gagaggcgta taaacttgaa aaagttgctt cttgaagaag cagagctaga acgacgagag 1560 cgagatatga ctatgattgc tgatgaagaa caaagaacat tgctacatag gttggaaagt 1620 tctagggttg aagcaactca tgcagttgcc aaagccgaag ctgatgctcg ggcagctgtc 1680 gctatggctg ctcttgcttc taaggaagct aatgattacg acagtaagat ggcttttgac 1740 aggtcttgta aagaacagga actgcggttg cgcgaactcg aagtgaatag tatgccgagt 1800 aaaacagaga ggtatgttca cactggtata caaggtggcg cgcaattggc tggagctatg 1860 gctgtcggtg ctatgctgcg acgtggggct ggttcttctt ctcaaaccgt ttctagtggt 1920 gctaatattg gttctcgttc gcagagtttg actcgtggtc gtagtgcatc acaacctttg 1980 tcatcggttg gtggttctac tcgtggggtt aataataata ttagtaatac taatcttgtt 2040 agggctggta atagtgctga agtttctgct ggtagatcta ctaatagtgg taatagtaat 2100 ttttggtcca aattacgtgt tggtgaagga tggtccaagt acagcgtaga acgggcggcg 2160 acaagggcgc aaagggcaat cgtgcttcca gcgcccccgt ccgctcccgc cggatgactc 2220 aggatgactg gtcacgtacc catcccgacg atattttctc agttattgag aaaacactag 2280 tagaggatgg gtataaatgg aacggggtaa aacccggaca ttgcgattgg ggcaaattga 2340 aggaatctgg tgctattgat aattttaggg gtacattaga aggcgagtta ggtaaaaatt 2400 gtgatttgac ttgtaatgct gctgccgtta aacttgacac attgcaaaag gtgaaaatgt 2460 catcagattg gactgccaga gttggtattg ttttgggtgc tcctggtgtt gggaaatcta 2520 cctcgattaa gaacttatta gacaaatttg gagcaaaaca taaaatggtg ttatgcttac 2580 cttttagtca gttgttagaa ggagtgtttg ctggtcggtt ggacactttt ctggttgatg 2640 atttgttctg taggtccgtg ggatatggaa aatacaacac catgcttgta gatgaggtca 2700 ctcgtgtgca tatgtgtgag attttggtac ttgccggaca tttaggtgtt aagaacgtga 2760 tatgttttgg tgatccggcg caagggttaa attataaggc cggttctgcc gtgaactata 2820 attttccgat tattgctgaa tgttatgcta gtagacggtt cggtaaggcg actgccgatc 2880 tcattaattc cagcaatggt ggtggtaaac ctgtagtcgg taataacgag gtaaaggata 2940 gttggacttt tgaagaacta tgtgggaaga tactagatat gtctactgtt ttggtagcta 3000 cacgcgaaac ccaaaagttt ctattagaag ataatattga gtctattctt tactcggacg 3060 cccacgggca aacatacgac gttgtcacta tcattttgga agacgagttt gatgatgctg 3120 ccatttgcga cccaaatgtt agggctgtct tgttaactag agctcgtaag ggtggtatga 3180 ttaagatggg tcctaacatt gctgccaggt tcaaaaacgg tgattttaat tcacgtggag 3240 ttagtaagtc ttgcaccgga gatacttttt gcgaagatag ataatgtcta gggaaataac 3300 cgctcgaccc aataagaatg tgcctattgt tgttggtgtt tgtgttgtgg ctttctttgt 3360 attgctggcg ttcatgcagc aaaaacataa gacacattct gggggcgatt acggagtccc 3420 aacattttct aacggtggta aatacagaga cggtacaagg tcagctgatt ttaatagtaa 3480 taatcatcgt gcttacgggt gcggtgggtc tgggggtagc gttagtagtc gagtcgggca 3540 gcaacttgtt gtgttagcta ttgtgtctgt gttaatagta tcactgttac aacgattaag 3600 atctccacca gaacatattt gtaatggtgc ttgtggttaa agtagattta tctaatattg 3660 tgttgtatat agttgccggt tgtgttgttg ttagcatgtt gtactcacca tttttcagca 3720 acgatgttaa agcgtccagc tatgcgggag cagtttttaa agggagtggc tgtatcatgg 3780 acaggaattc gtttgctcaa tttgggagtt gcgatattcc aaagcatgta gccgagtcca 3840 tcactaaggt tgctaccaaa gagcacgatg ctgatataat ggtaaaaaga ggtgaagtga 3900 ccgttcgtgt tgtgactctc accgaaactc ttttcataat attatctaga ttgtttggtt 3960 tggcggtgtt tttgttcatg atatgtttaa tgtctatagt ttggttttgg tgtcatagat 4020 aaattgtggt agaatgagta tggggatggt agatagtttg tgtgtgtttg ttggtcgggt 4080 cataactgag ggatctgaaa gtgttgaggg tgtggaacgg ttttccatta agtttagtga 4140 ctggaaattg ttcaccaccg cggtgtacgt tgaatatcgt cagttaggtg agaaagagtg 4200 tagtttgaag gatgttggta ggttacattt taatatgtca tgtgtgaaat gctgtcaaaa 4260 acttaaatgc aagaaacaaa ataaaaatca tagtaaacac gtccaaaatg gatatttacg 4320 caaggtgcgt aatttttcca ttttaggtgt ttgcggtgat tgttgtgagt cttttacact 4380 tgcggacgaa aaacatcatg ttattgtcga tcctgaggtg taatagggtt tattcaagag 4440 actatgttta atattaataa tcagggccat gccacaggcc tcctattggg ttgttccgaa 4500 ggttgttgtg gtttatattg cttattggta agtgatttga ttaaggttgc agtgtactga 4560 ctgggtgtga attgtaccag tccatgtagg gtctgttttc agtatattg 4609 //