ID DQ113899; SV 1; linear; genomic RNA; STD; VRL; 2512 BP. XX AC DQ113899; XX DT 15-AUG-2005 (Rel. 84, Created) DT 20-SEP-2008 (Rel. 97, Last updated, Version 3) XX DE Adult diarrheal rotavirus strain J19 VP4 gene, complete cds. XX KW . XX OS Adult diarrheal rotavirus strain J19 OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus. XX RN [1] RP 1-2512 RX DOI; 10.1099/vir.0.2008/001933-0. RX PUBMED; 18796732. RA Jiang S., Ji S., Tang Q., Cui X., Yang H., Kan B., Gao S.; RT "Molecular characterization of a novel adult diarrhoea rotavirus strain J19 RT isolated in China and its significance for the evolution and origin of RT group B rotaviruses"; RL J. Gen. Virol. 89(Pt 10):2622-2629(2008). XX RN [2] RP 1-2512 RA Ji S.Z., Jiang S.J., Yang H.Y.; RT "Complete genomic sequence of a novel adult diarrhea rotavirus strain J19 RT related to the evolution and origin of group B rotaviruses"; RL Unpublished. XX RN [3] RP 1-2512 RA Ji S.Z., Jiang S.J., Yang H.Y.; RT ; RL Submitted (30-JUN-2005) to the INSDC. RL Department of Diarrhea Disease, National Institute for Communicable Disease RL Control and Prevention, Chinese Center for Disease Control and Prevention, RL P.O.Box 5, Changping, Beijing 102206, People's Republic of China XX DR MD5; 97abf4d458753ba61cd3f1f1bba4ecc2. XX FH Key Location/Qualifiers FH FT source 1..2512 FT /organism="Adult diarrheal rotavirus strain J19" FT /strain="J19" FT /mol_type="genomic RNA" FT /db_xref="taxon:335103" FT CDS 11..2482 FT /codon_start=1 FT /product="VP4" FT /note="outer capsid protein" FT /db_xref="GOA:Q45UF8" FT /db_xref="InterPro:IPR035330" FT /db_xref="InterPro:IPR038017" FT /db_xref="InterPro:IPR042546" FT /db_xref="UniProtKB/Swiss-Prot:Q45UF8" FT /protein_id="AAZ03487.1" FT /translation="MSLRSLLITTEAVGETTQTSDHQTSFSTRTYNEINDRPSLRIEKD FT GEKAYCFKNLDPVRYDTRMGEYPFDYGGQSTENNQLQFDLFTKDLKADTDIDLSDDVKD FT DLKRQIMEYYQQGYRAIFLVRPQNQEQHYIASYSSTNLNFTSQPSIGVNLSILNKIQEN FT KLYIYSTQPHIPSVGCEMIAKIFRTDIDNENSLINYSAPVTVTISVTKATFGDTFVCNH FT PNMNYQDLIPTMTKNSIYHDVKRITKIHEYINSKKKKKNSTSKIGGIQIAESKDGFWKI FT LTKNYQIKLKFGVEGYGVMGGTFGNWLIDSGFKTVETNYEYQRNGKTINATTVASVKPS FT RKCGTRSPVFGQLQFSGEMMVLSHNDILTVFYTEREWALSNAIYAKNFATDFKRQFEIT FT AQSDELLVRTNVVPHTIKNTPGKALMEYSHGGFGQIDTSDYTGMALTFRFRCISEDLPE FT GYYDRDKALAFANVGLTSFQDRQEANGTYWVYNTSTVGFGSCYPKKEFEYDINVTYTTL FT LPSDPEFTTGGTNYAQSVTAVLEESFINLQNQVNEMLTRMNISDLTSGVMSVFSVATSF FT PQILDGISDLLKAASSAFKKVKGKVGSVAKRLRGKRYVRLFDENVSIEETPRFLDSIRS FT SRRPSILSNMFNDDETFTALHTLASRTNSVASDVTYLQPIITTRIANSTPPVIAPASSV FT TYAKLKDISKIINAEIDPKSIMEFNQISNTISILDSTKKLAQYAVDPDIIDGILNKMVG FT GHARSLFSLKVRKHLLDAVEKDAFVKYNYHDLMGKLLNDRELLDITNNLSSQKQFELAK FT EFRDLLINALA" XX SQ Sequence 2512 BP; 939 A; 395 C; 449 G; 729 T; 0 other; ggcacttaag atgtctctca gaagtttgtt gattacaact gaggcggttg gagagaccac 60 tcaaacgagt gatcatcaaa catcatttag cacaagaacg tataacgaaa tcaatgatag 120 accttcactg agaatagaaa aggatggaga aaaagcatac tgttttaaaa atctagatcc 180 agtaagatat gatacacgaa tgggagagta cccgtttgat tacggtggac aatcaacaga 240 aaataatcaa ttacaatttg atcttttcac aaaggatctc aaagcagaca ctgatattga 300 tttatctgat gatgtgaaag atgatttgaa acggcaaatt atggaatact atcaacaagg 360 ataccgcgca atttttttag ttagacctca aaatcaagaa caacattata tagccagtta 420 tagttcaact aatttaaact tcacatcaca gccaagtatc ggtgttaacc tatctatttt 480 aaataaaatt caagagaata aattatacat ttattccacg cagccacaca ttccttctgt 540 aggatgtgag atgatagcaa aaatatttag aaccgatata gataatgaaa attcattgat 600 taactattca gcacctgtaa cggtaacgat ctcagtcaca aaagctacat ttggagacac 660 atttgtgtgc aatcatccga acatgaatta ccaagattta atacctacta tgactaaaaa 720 tagcatttac catgatgtta aaagaataac taaaatccat gaatacatta atagtaaaaa 780 aaagaagaaa aatagcacta gtaaaatagg aggaattcaa atagctgaat caaaagacgg 840 attttggaaa atattaacga aaaattatca aatcaaactc aaatttggtg tcgaaggata 900 tggagttatg ggtggcacat ttggaaattg gctaattgat agtggattta aaaccgttga 960 gacaaattat gagtaccaga gaaacgggaa gacaattaat gcaacaacgg ttgcttcagt 1020 taaaccatca agaaaatgtg gaactagaag tcctgtattt ggacagttac agttttcagg 1080 agaaatgatg gtgttatcac ataatgatat tctaactgtg ttctatactg aaagggaatg 1140 ggctttgtct aatgctatat atgcaaaaaa ctttgcaacg gattttaaaa gacaatttga 1200 aataactgca cagtcagatg aattattagt tcgtactaat gtagttccac atactataaa 1260 aaatacacca ggaaaagctt taatggaata ttcacatgga ggttttggcc aaattgatac 1320 ttccgactat actggcatgg cacttacatt tagatttaga tgcattagcg aagatttacc 1380 cgaaggttat tatgacagag ataaagcttt agctttcgct aatgtcggtc taacatcatt 1440 tcaagataga caagaagcta atggaactta ttgggtatac aacacatcta ctgttggatt 1500 cggttcatgt tatccgaaaa aagaatttga atatgatatc aatgtgacat atactacact 1560 gttgccatct gatccagaat ttacaacggg gggaactaac tatgctcaat cagttactgc 1620 agttctggaa gaatcattta ttaatttaca aaatcaagtt aatgagatgt taacaagaat 1680 gaacatttct gatcttactt cgggagttat gtctgttttt tctgtcgcaa catcttttcc 1740 acaaattctt gatggtataa gtgatctgtt aaaagcagct tcatcagctt ttaaaaaagt 1800 gaaaggaaag gtaggaagtg ttgctaaaag actgagaggg aagagatatg ttagactttt 1860 tgatgaaaat gtatcaatcg aggagactcc cagatttctt gattcaatta gatcaagtag 1920 acgaccgtca atcttgtcca acatgttcaa tgacgacgaa acttttactg ctttgcatac 1980 tttagcaagt agaacgaatt ccgttgcaag tgatgtgaca tatttacagc ctataataac 2040 aacaagaata gcaaactcga cacctccagt tattgcacca gcatcttccg taacatatgc 2100 aaaactaaaa gatatttcaa aaattatcaa cgcggaaatt gatccaaaat caattatgga 2160 gtttaaccaa atatctaata ctatcagcat attagattca acaaagaaat tagcacaata 2220 tgctgttgat ccagacatta tagatggtat attgaataaa atggtaggtg gacacgctag 2280 atcgttattt tcacttaaag ttaggaaaca tttgttagat gccgtggaaa aggacgcatt 2340 cgtgaaatat aattatcacg atttgatggg taaactatta aatgatagag aactgttaga 2400 tataacaaat aatctatcct cgcaaaaaca attcgaatta gcaaaagaat ttcgcgatct 2460 gttaattaac gctcttgcct agatgatatg aaagagatct ttaaatatac cc 2512 //