ID DQ875869; SV 1; linear; genomic DNA; STD; VRL; 2589 BP. XX AC DQ875869; XX DT 26-SEP-2006 (Rel. 89, Created) DT 01-AUG-2007 (Rel. 92, Last updated, Version 2) XX DE Corchorus yellow spot virus segment DNA-B, complete sequence. XX KW . XX OS Corchorus yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2589 RX DOI; 10.1007/s11262-007-0080-5. RX PUBMED; 17638064. RA Hernandez-Zepeda C., Idris A.M., Carnevali G., Brown J.K., RA Moreno-Valenzuela O.A.; RT "Molecular characterization and phylogenetic relationships of two new RT bipartite begomovirus infecting malvaceous plants in Yucatan, Mexico"; RL Virus Genes 35(2):369-377(2007). XX RN [2] RP 1-2589 RA Hernandez-Zepeda C., Moreno-Valenzuela O.A., Brown J.K.; RT ; RL Submitted (01-AUG-2006) to the INSDC. RL Unidad de Bioquimica y Biologia Molecular de Plantas, Centro de RL Investigacion Cientifica de Yucatan (CICY), Calle 43 No. 130, Merida, RL Yucatan 97200, Mexico XX DR MD5; 81300a58ab453074b335bc19fbd74856. XX FH Key Location/Qualifiers FH FT source 1..2589 FT /organism="Corchorus yellow spot virus" FT /segment="DNA-B" FT /host="Corchorus siliquosus" FT /mol_type="genomic DNA" FT /country="Mexico:Yucatan" FT /clone="p347BCoYSV" FT /db_xref="taxon:403897" FT gene 383..1159 FT /gene="BV1" FT CDS 383..1159 FT /codon_start=1 FT /gene="BV1" FT /product="BV1" FT /note="NSP" FT /db_xref="GOA:Q06HQ2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q06HQ2" FT /protein_id="ABI85399.1" FT /translation="MIMYPVRNKRVGYFPNRRYTYRNNVFNRSAYVKRHDGKRRGSRYV FT KPNDEPKMSVQSIHENQYGTDFVMAHNSAISTFISYPDLGKMEPGRSRSYIKLKRLRFK FT GTVKIERVQSDMNMDGTLPKIEGVFSLVVVVDRKPHLGPSGCLHTFDELFGAIIHSHGN FT LSIVPSLKDRYYIRHVFKRVLSLENDTLMVDVEGSTALSNRRFNCWSTFKDVDRDACKG FT VYDNISKNALLIYYCWVSDTPSKASNYVSFDLDYVG" FT gene complement(1221..2102) FT /gene="BC1" FT CDS complement(1221..2102) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:Q06HQ1" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q06HQ1" FT /protein_id="ABI85400.1" FT /translation="MESQLVNPPHAFNYIESHRDEYQLSHDLTEIILQFPSTAAQLTAR FT LHRSCMKIDHCVIEYRQQVPINAAGTVIVEIHDKRMTDNESLQASWTXPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFWHVDYGRTERKPIRCASMSRVGLRGPIDIRPGESWASRSTIGTGQSEAD FT SEVENELHPYRHLNRLGTSVLDPGESASIVGAQRAESNITLSMGQLNEIVRTTVQECIN FT NNCQASQAKSLK" XX SQ Sequence 2589 BP; 654 A; 533 C; 621 G; 779 T; 2 other; accggatggc cgcgcgcccc ccccctggtg cccgttctcg cacacgcgct cccctggtgt 60 gttgctggca cgcgccccct cattggtgcg ggtccttcac gctccatctt ttgagtggcc 120 tttaattcaa attaaaggat aatgctttct cgcgcgaatt gcttttatga tttgaattac 180 tgtcgcgcga tgactgacta tggcccattg taccatgtga aggacgtggc tatttttcga 240 ccatgccgct gcgtttattt gtgtctgatg ttggacgaat tatttatata ttgtagtgga 300 catgtatgtc atgtacaacc cacgcagcgt ctaaacacgt ttattttcta tctttaattg 360 tgtttcattt gcatttgatt ttatgatcat gtatcctgtg aggaataaac gtgttggtta 420 cttccctaat cgacgatata cctatcgtaa taatgtgttt aaccgttcag cctatgtgaa 480 acgacatgat gggaaacgac gtggaagtcg atatgtcaag cccaatgacg agcccaagat 540 gtcagtccaa tccatacacg aaaatcagta tggcactgat tttgtcatgg cccataattc 600 agctatctcg acgttcatca gttacccgga cttgggtaag atggaaccgg gccgaagcag 660 gtcatatatc aagttgaaac gactccgttt caaagggacg gtgaagattg aacgtgtgca 720 atcggatatg aacatggacg ggactctccc caaaatagaa ggagtcttct ctcttgttgt 780 tgttgttgat cggaaacccc acttgggtcc aagtggttgt ctgcatacat tcgacgagct 840 gttcggagca atcattcaca gccatggcaa tctcagcatt gtcccttctc tgaaagaccg 900 ttattatatt cgccatgtgt tcaaacgcgt attgtcattg gagaatgaca cgctgatggt 960 cgacgttgaa ggatctacag ctctatctaa caggcgtttt aattgttggt ccacgttcaa 1020 agacgttgat cgtgatgcat gcaagggtgt ttatgataat ataagcaaga acgccctgtt 1080 aatttattat tgctgggtgt ccgatacgcc ttcgaaggca tctaattatg tatcttttga 1140 tcttgattat gttggttaat gtaataaatg ttgtttatcc aaaactgatt atcttgatat 1200 gataaatcaa aagataacat ttatttcaat gacttggctt gagaagcttg acagttatta 1260 ttaatacatt cttggaccgt agtcctaact atttcgttca attggcccat ggacaatgtg 1320 atgttggact ccgctctctg ggctcccacg attgaagcag actctcctgg atctagaacg 1380 ctcgtcccga gcctgttcag gtgtctgtat gggtggagct cgttctccac ctctgagtcc 1440 gcctcagatt ggcccgtacc tattgtactc ctggaagccc atgactcgcc aggccttata 1500 tcgattgggc ctcgtaaccc aactctggac attgatgcgc atctgatggg cttcctytcc 1560 gttcttccgt agtcgacgtg ccaaaagtcc acatccttgt ccgtgaactg tttggaaagg 1620 atcttcactg ttggtgcccg gaacgggata tccaccgaat gtttggccgt cgacagtttc 1680 agcttccctt tgaacttggc gaagtgggtc ctctgatgaa cattcgtatc ggaaactctg 1740 taatagagtt tccacgggat tgggtctttg agggagaaaa aggaagctga gaagtagtgg 1800 agatctatgt tgcatctgat cggaaragtc cacgatgcct gtaatgattc gttatctgtc 1860 atccttttgt cgtggatctc cactattacc gtcccggcgg cgttgattgg tacctgttgc 1920 ctgtactcta tgacgcagtg gtcgattttc atacagctcc gatgaagcct tgccgtcaac 1980 tgcgccgccg tggaaggaaa ttgcagtatt atttcagtca ggtcatgaga aagctgatac 2040 tcgtcgcggt gagactctat gtaattgaag gcatgtggag gattgactag ctgagattcc 2100 atatgaagaa gaaaggccgc gcagcggaac cgattgatga agttgaatcg ggaaagagat 2160 gaacaactga tgaacaagat gatcaagtct ggaaagctct cctttttgat ctcgaagaag 2220 gtaaatgtgt atgtgtctga cagtttctgt gtttgagagt gttatatgtc tatgaataat 2280 aattttgagg aaatggaaaa cgggaaactt gttcaagaat tatgtttttt gagaaagaaa 2340 agagtgttga tgaacaaatt gtagaattct ggaaatgaaa gagagaattt gtatgaaccc 2400 agaacttctg ggttgatggg tatttaaatt gggaaagtgt tcatcaactg atggcagttt 2460 tgtaaatatg gatgttcccc cgatagctct ctcgctcaaa attcctatga attgggggaa 2520 ctgggggaac ttatatagta gaagttccta aaggcagatc aacacgtggc ggccatccgt 2580 tataatatt 2589 //