ID DQ922677; SV 1; linear; genomic RNA; STD; VRL; 3333 BP. XX AC DQ922677; XX DT 19-SEP-2006 (Rel. 89, Created) DT 31-JUL-2009 (Rel. 101, Last updated, Version 2) XX DE Grapevine fanleaf virus clone Vol57c4 segment RNA2 polyprotein gene, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3333 RX DOI; 10.1007/s10658-006-9096-2. RX AGRICOLA; IND43877386. RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT "Genetic variability within RNA2 of Grapevine fanleaf virus"; RL Eur. J. Plant Pathol. 117(3):307-312(2007). XX RN [2] RP 1-3333 RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT ; RL Submitted (28-AUG-2006) to the INSDC. RL Plant Physiology and Biotechnology, National Institute of Biology, Vecna RL Pot 111, Ljubljana 1000, Slovenia XX DR MD5; 56ad241901e7a5a53c95a3d642a45af7. XX FH Key Location/Qualifiers FH FT source 1..3333 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cv. Volovnik" FT /isolate="Vol57" FT /mol_type="genomic RNA" FT /country="Slovenia" FT /clone="Vol57c4" FT /db_xref="taxon:12274" FT CDS 1..3333 FT /codon_start=1 FT /product="polyprotein" FT /note="contains homing protein (2A), movement protein (2B) FT and coat protein (2C)" FT /db_xref="GOA:Q09G70" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09G70" FT /protein_id="ABI63941.1" FT /translation="MGKFYFSNRRLACWAAGKNPHLGGSVEQWLAAISADPSFRQTVKE FT DVQDNKLQPTAVRMFSWKVGFGPLDNPEKSDWHFVLTGERPTQPSRPVKADEVVVVPQS FT KKVMIPSPPPPPTPYFRAVGAFAPTRSGFVRATVERLIREREESRAAALFAELPLEYPQ FT GAPLKLSLAMKFAMLKHTTWRKWYDTSDERLLKAHPGGPCLPPPPPIQSPPSFQERVRE FT FCRMKSCAKAFALETSLGLNKAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVS FT ISVAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLL FT PPLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMS FT AVVVDAPEIAINPFGMPGNPTDLTVVATYGHERDMARAFIGSASTFLGNGLARAIFFPG FT LQYSQEEPRRESIIRLYVASTNATVDTDSILAAISVGTLRQHVGSMHYRTVANTVHQAQ FT VQGTTLRATMMGNTVVVSPEGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFS FT IRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPKDCQANRHLGTLNIRDMI FT SDFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITTSADPVY FT TLSVPHWLIHHKLGTFSCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAAGWQ FT AVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTTVTALKSAGLTLGQ FT VPMVGTTKVYNLNSTLVSCVLGMGGIIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNEL FT FKYPGVYVEEDGSFEVKIRSPYHRTPARLLVGQSQRDMSSLNFYAIAGPIAPSGETARL FT PIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSRTCRVSMGE FT NPFAAMIACHGLHSGVLDLKFQWSLNTEFGKSSGSVTITKLVGDKATGLDGPSQIFALQ FT KLEGVSELLVGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTS FT FPV" XX SQ Sequence 3333 BP; 801 A; 752 C; 890 G; 890 T; 0 other; atgggcaaat tttatttttc caacaggcgt ctggcctgtt gggctgctgg aaagaacccc 60 catctagggg gttctgtcga acaatggctg gcggccatta gtgctgaccc ctccttccgc 120 caaactgtta aggaggatgt ccaggataac aaactgcagc ctacggctgt caggatgttt 180 tcctggaaag tgggattcgg gccccttgac aacccggaaa aaagtgattg gcatttcgtc 240 ctcacgggcg agaggccaac acagccgtcc cggccggtta aagccgatga ggttgtggtg 300 gtgccacaat cgaagaaggt gatgattcca tcgccacctc ctcccccaac tccctacttt 360 agggctgttg gggcttttgc accaacccgg tccgggtttg ttcgggccac tgtggaaagg 420 ctcatccgtg aacgggaaga gtcgagagct gcggcactct ttgccgaatt gccattggag 480 taccctcagg gtgctccttt gaagttgagc ctggcaatga agtttgccat gctcaaacat 540 accacttgga ggaagtggta tgacactagt gatgagcgcc tcttgaaggc tcatcctggt 600 ggtccttgtc ttcctcctcc tcccccaatc caaagtcctc cctcttttca agagagggtt 660 agggaattct gcaggatgaa atcctgtgcc aaggcttttg ccttggaaac ctctctgggt 720 ctcaataagg cctgggtggg tttggtagac atccccagca cctctgtgtg ctgtgcggat 780 ggtagaacta ccggtgggca aacgattgct caagaagctg accctttgca acatagggtc 840 agcatatcag tagcccccgg tagggcacaa tggatctccg agcgcagaca ggctctgcga 900 aggagagagc aagcaaatag cttgcagggt cttgctgctc agactgatat gacttttgag 960 caggccagga acgcctatct tggcgctgct gacatgattg agcaaggcct accgctactt 1020 ccccctctgc gcagcgctta tgcccctagg ggcttgtgga ggggaccctc aaccagagcc 1080 aattacacgc ttgatttcag gctcaatggt attccgactg ggacaaacac attggaaata 1140 ttgtacaatc ccgtgtcgga agaagagatg gaagagtacc gggacagagg catgtcggct 1200 gtggtggttg atgcgccaga aatagctata aacccgttcg gcatgcctgg aaatccaacg 1260 gacttgactg tcgtggcaac ttatgggcat gaacgtgata tggcgcgtgc ctttattgga 1320 tctgcttcca cattcttagg gaatgggtta gctagagcca ttttctttcc tggcttgcaa 1380 tatagtcagg aggaaccaag gcgcgaatct ataattcgcc tgtatgttgc ctctactaac 1440 gccactgtgg acactgattc aatcttggcg gccattagtg ttggcacctt gcgtcaacac 1500 gttggctcca tgcactatcg tactgtggca aataccgtgc accaggccca ggtgcaagga 1560 acgacactca gggccactat gatgggtaat actgttgtag tgtcacctga aggaagccta 1620 gtcactggaa cccccgaagc gagagtcgaa atagggggcg gttcaagtat taggatggtg 1680 ggacctctgc aatgggagag tgtagaggaa ccagggcaaa ctttctctat cagaagtcgc 1740 tcacgttccg tgaggattga tagaaatgtt gatcttcctc aacttgaggc tgagcccaga 1800 ttgagctcaa ccgtgagggg attggctggt agaggagtga tttatattcc caaggattgc 1860 caggcaaata ggcacttggg caccctgaat atacgcgata tgatttcaga tttcaaaggt 1920 gttcagtacg aaaagtggat aactgcagga ctagtcatgc ctacctttaa gatagttatt 1980 aggctacctg ctaatgcttt tactggattg acgtgggtga tgagctttga cgcttataac 2040 cggataacta gtaggattac tactagtgca gatcctgtat acaccttgtc agtcccacat 2100 tggcttatcc accataagtt gggtacgttt tcttgtgagg tggactacgg agagttgtgt 2160 ggtcatgcca tgtggttcaa gtccacaact tttgaatctc cgagactaca ttttacgtgt 2220 ctcactggca acaacaaaga gctggcggca ggctggcaag ctgtcgtaga gctatatgct 2280 gaattggaag aggctacttc ttttcttggg aaaccaactt tggtttttga cccaggcgtt 2340 tttaatggca aattccaatt cctgacttgc cctcccatat tctttgatct cacaaccgtc 2400 acggctctta agagtgctgg gctgacgttg ggacaagtcc caatggttgg cactaccaag 2460 gtttacaatc taaatagcac tcttgtgagt tgtgttctag gaatgggagg tattattagg 2520 ggaagggtgc acatttgtgc gccaatcttc tatagtatag tgctgtgggt tgtgagtgag 2580 tggaacggga ccactatgga ctggaatgaa cttttcaagt atcccggggt gtatgtggaa 2640 gaggacggaa gttttgaagt taaaattcgc tctccatatc accgaacgcc cgctagattg 2700 cttgtcggcc aaagtcagag ggacatgagc tctctgaatt tctatgcaat agcgggacct 2760 atcgctcctt cgggtgagac tgcacgactt cctattgttg tgcagatcga tgagattgtg 2820 cgcccagacc tctctttacc aagttttgaa gatgattact tcgtgtgggt agacttttct 2880 gagtttactc tcgacaagga agaaattgag attggttctc gtttctttga tttcacttca 2940 agaacttgta gagtgtctat gggcgaaaac ccatttgctg caatgattgc ttgccatgga 3000 ttgcatagtg gtgtcctgga cctcaaattt caatggagtc tgaacactga atttggcaag 3060 agtagcggga gcgttaccat aactaaactg gtgggcgata aagccacggg tctggacggg 3120 ccttcacaga tttttgccct acaaaagcta gagggagttt cagagttgtt ggttgggaat 3180 tttgcaggag caaacccaaa tactcatttt tctctctata gtcgatggat ggcaattaaa 3240 ctggatcaag ctaagagtat taaagtactc cgcgttttat gtaagcctcg tccaggtttt 3300 agtttttatg gaagaaccag tttcccagtc tag 3333 //