ID EF469769; SV 1; linear; genomic RNA; STD; VRL; 6355 BP. XX AC EF469769; XX DT 02-APR-2007 (Rel. 91, Created) DT 04-APR-2012 (Rel. 112, Last updated, Version 2) XX DE Tobacco mild green mosaic virus strain U2 (small type) isolate DSMZ DE PV-0113, complete genome. XX KW . XX OS Tobacco mild green mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6355 RA Hiebert E., Charudattan R., Horrell J., Maia G.S., Elliott M.S.; RT "Characterization of a tobacco mild greem mosaic tobamovirus isolated from RT a gesneriad in the USA"; RL Unpublished. XX RN [2] RP 1-6355 RA Hiebert E., Charudattan R., Horrell J., Maia G.S., Elliott M.S.; RT ; RL Submitted (05-MAR-2007) to the INSDC. RL Plant Pathology, University of Florida, 1453 Fifield Hall, PO. Box 110680, RL Gainesville, FL 32611-0680, USA XX DR MD5; 526140fb8e5e4f91ec842605b157b0d7. DR EuropePMC; PMC6258955; 30257999. XX FH Key Location/Qualifiers FH FT source 1..6355 FT /organism="Tobacco mild green mosaic virus" FT /host="Columnea allenii x Columnea crassifolia" FT /strain="U2 (small type)" FT /isolate="DSMZ PV-0113" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:12241" FT gene 71..4900 FT /gene="RdRP" FT CDS 71..4900 FT /codon_start=1 FT /transl_except=(pos:3404..3406,aa:OTHER) FT /gene="RdRP" FT /product="p183 kDa protein" FT /note="replication associated protein; readthrough product" FT /db_xref="GOA:A4LAL6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A4LAL6" FT /protein_id="ABO64418.1" FT /translation="MAHIQSTISNALLESVSGKNTLVNDLARRRMYDTAVEEFNARDRR FT PKVNFSKTISEEQTLLVSNAYPEFQITFYNTQNAVHSLAGGLRALELEYLMLQVPYGSP FT TYDIGGNFAAHLFKGRDYVHCCMPNLDIRDIMRHEGQKDSIEMYLSRLSRSNKVIPEFQ FT REAFNRYAEAPNEVCCSKTFQDCRIHPPENSGRRYAVALHSLYDIPVHEFGAALISKNI FT HVCYAAFHFAEALLLDQTEVTLNEIGATFKREGDDVSFFFADESTLNYSHKYKNILHYV FT VKSYFPASSRIVYFKEFLVTRVNTWFCKFTKVDTYILYKSVRQVGCDSDQFYEAMEDAF FT AYKKTLAMFNTERAIFRDTASVNFWFPKMKDMVIVPLFEGSITSKKMTRSEVIVNRDFV FT YTVLNHIRTYQAKALTYQNVLSFVESIRSRVIINGVTARSEWDVDKAILQPLSMTFFLQ FT TKLAALQDDIVMGKFRCLDKTTSELIWDEVGKFFGNVFPTIKERLVSRKILDVSENALK FT IKIPDLYVTWKDRFVAEYTKSEELPHLDIKKDLEEAEQMHDALSELSILKGADNFDIAK FT FKDMCKALDVSPDVAARVIVAVAENRSGLTLTFDKPTEENVAKALKSTASEAVVCLEPT FT SEEVNVNKFSIAEKGRLPVCAESHGLTNANLEHQELESLNDFHKACVDSVITKQMASVV FT YTGSLKVQQMKNYVDSLAASLSATVSNLCKSLKDVVGYDSDSREKVGVWDVTLKKWLLK FT PAAKGHSWGVVLDYKGKMFTALLSYEGDRMVTESDWRRVAVSSDTMVYSDIAKLQNLRK FT TMRDGEPHEPTAKMVLVDGVPGCGKTKEILERVDLDEDLILVPGKQAAAMIRRRANSSG FT LIRATMDNVRTVDSFLMHPKPRSHKRLFIDEGLMLHTGCVNFLVLISGCDIAYIYGDTQ FT QIPFINRVQNFPYPKHFEKLQVDEVEMGRTTLRCPGDVNFFLQSKYEGAVTTTSTVQRS FT VSSEMIGGKGVLNSVSKPLKGKIVTFTQADKFELEEKGYKNVNTVHEIQGETFEDVSLV FT RLTATPLTLISKSSPHVLVALTRHTKSFKYYTVVLDPLVQIISDLSSLSSFLLELYMVE FT AGSRXQLQMDAVFKGHNLFVATPKSGDFPDLQFYYDVCPPGNSTILNKYDAVTMRLRDN FT SLNVKDCVLDFSKSIPMPKEVKPCLEPVLRTAAEPPRAAGLLENLVAMIKRNFNAPDLT FT GTIDIESTASVVVDKFFDSYFIKKEKYTKNIAGVMTKDSMMRWLGKQERSTIGQLANYN FT FVDLPAIDQYKHMIKAQPKQKLDLSIQNEYPALQTIVYHSKQINGIFGPVFSELTRLLL FT EAVDSQKFLFFTRKTPEQIQEFFSDLDSHVPMDVLELDISKYDKSQNEFHCAVEYEIWK FT RLGLNEFLAEVWKQGHRKTTLKDYIAGIKTCLWYQRKSGDVTTFIGNTVIIAACLGSML FT PMEKVIKGAFCGDDSVLYFPKGLDFPDIQSCANLMWNFEAKLYRKRYGYFCGRYIIHHD FT KGAIVYYDPLKLISKLGAKHIKDYDHLEELRVSLCDVACSLGNCAYFPQLNAAIKEVHK FT TAIDGSFAFNCVNKFLCDKFLFRTLFLNGC" FT CDS 71..3406 FT /codon_start=1 FT /gene="RdRP" FT /product="p126 kDa protein" FT /note="methytransferase; helicase" FT /db_xref="GOA:A4LAL7" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A4LAL7" FT /protein_id="ABO64417.1" FT /translation="MAHIQSTISNALLESVSGKNTLVNDLARRRMYDTAVEEFNARDRR FT PKVNFSKTISEEQTLLVSNAYPEFQITFYNTQNAVHSLAGGLRALELEYLMLQVPYGSP FT TYDIGGNFAAHLFKGRDYVHCCMPNLDIRDIMRHEGQKDSIEMYLSRLSRSNKVIPEFQ FT REAFNRYAEAPNEVCCSKTFQDCRIHPPENSGRRYAVALHSLYDIPVHEFGAALISKNI FT HVCYAAFHFAEALLLDQTEVTLNEIGATFKREGDDVSFFFADESTLNYSHKYKNILHYV FT VKSYFPASSRIVYFKEFLVTRVNTWFCKFTKVDTYILYKSVRQVGCDSDQFYEAMEDAF FT AYKKTLAMFNTERAIFRDTASVNFWFPKMKDMVIVPLFEGSITSKKMTRSEVIVNRDFV FT YTVLNHIRTYQAKALTYQNVLSFVESIRSRVIINGVTARSEWDVDKAILQPLSMTFFLQ FT TKLAALQDDIVMGKFRCLDKTTSELIWDEVGKFFGNVFPTIKERLVSRKILDVSENALK FT IKIPDLYVTWKDRFVAEYTKSEELPHLDIKKDLEEAEQMHDALSELSILKGADNFDIAK FT FKDMCKALDVSPDVAARVIVAVAENRSGLTLTFDKPTEENVAKALKSTASEAVVCLEPT FT SEEVNVNKFSIAEKGRLPVCAESHGLTNANLEHQELESLNDFHKACVDSVITKQMASVV FT YTGSLKVQQMKNYVDSLAASLSATVSNLCKSLKDVVGYDSDSREKVGVWDVTLKKWLLK FT PAAKGHSWGVVLDYKGKMFTALLSYEGDRMVTESDWRRVAVSSDTMVYSDIAKLQNLRK FT TMRDGEPHEPTAKMVLVDGVPGCGKTKEILERVDLDEDLILVPGKQAAAMIRRRANSSG FT LIRATMDNVRTVDSFLMHPKPRSHKRLFIDEGLMLHTGCVNFLVLISGCDIAYIYGDTQ FT QIPFINRVQNFPYPKHFEKLQVDEVEMGRTTLRCPGDVNFFLQSKYEGAVTTTSTVQRS FT VSSEMIGGKGVLNSVSKPLKGKIVTFTQADKFELEEKGYKNVNTVHEIQGETFEDVSLV FT RLTATPLTLISKSSPHVLVALTRHTKSFKYYTVVLDPLVQIISDLSSLSSFLLELYMVE FT AGSR" FT CDS 4890..5660 FT /codon_start=1 FT /product="movement protein" FT /note="28.5 kDa protein" FT /db_xref="GOA:A4LAL8" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:A4LAL8" FT /protein_id="ABO64419.1" FT /translation="MAVSLRDTVKISEFIDLSKQDEILPAFMTKVKSVRISTVDKIMAV FT KNDSLSDVDLLKGVKLVKNGYVCLAGLVVSGEWNLPDNCRGGVSVCIVDKRMKRSKEAT FT LGAYHAPACKKNFSFKLIPNYSITSEDAEKHPWQVLVNIKGVAMEEGYCPLSLEFVSIC FT VVHKNNVRKGLRERILSVTDGSPIELTEKVVEEFVDEVPMAVKLERFRKTKKKVVGNNV FT NNKKINNSGKKGFKIEEIEDNVSDDESIASSSTF" FT CDS 5666..6145 FT /codon_start=1 FT /product="coat protein" FT /note="17 kDa protein" FT /db_xref="GOA:A4LAL9" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:A4LAL9" FT /protein_id="ABO64420.1" FT /translation="MPYTINSPSQFVYLSSAYADPVQLINLCTNALGNQFQTQQARTTV FT QRQFADAWKPVPSMTVRFPASDFYVYRYNSTLDPLITALLNSFDTRNRIIEVDNQPAPN FT TTEIVNATQRVDDATVAIRASINNLANELVRGTGMFNQAGFETASGLVWTTTPAT" XX SQ Sequence 6355 BP; 1925 A; 1111 C; 1495 G; 1824 T; 0 other; gatgttttaa tagttttcga caacaacaat taaaacaaaa acaacatatt acaaacaaca 60 aacaacaaca atggcacaca tacagtctac aattagcaac gcccttcttg aaagcgtgag 120 tggtaaaaac actctcgtta atgaccttgc aagaaggcgc atgtacgata cggccgtgga 180 agaatttaac gcccgcgacc gtagaccaaa ggtcaacttt tccaaaacta ttagcgaaga 240 gcaaacgctt ctagtctcca acgcgtaccc ggagttccag attacctttt ataatactca 300 aaatgccgta cacagtttgg ctggaggttt gagagcatta gaattggaat atctgatgct 360 acaagttccc tatggatcgc cgacatatga tataggtggg aactttgcag cacatttgtt 420 caaaggcagg gattacgtgc attgctgtat gcccaatctg gacatacgag atataatgag 480 gcacgaagga caaaaggact caattgagat gtatttgtcc agattgtctc gttctaacaa 540 ggtaattcct gagtttcaaa gggaggcttt taacaggtat gcagaagctc ccaacgaagt 600 ctgctgctct aaaacttttc aggattgtcg aatacatccg ccagagaata gtggtagaag 660 atacgctgtt gctctgcaca gtttgtatga tattcctgtg catgagtttg gagctgcgtt 720 aatatctaag aatatacatg tatgttatgc agctttccat tttgcagaag cattattact 780 agaccagacg gaggttacgc ttaatgaaat aggcgcaact ttcaaaagag aaggtgatga 840 tgtttctttt ttctttgctg atgaaagtac tttaaattat agtcataaat acaaaaatat 900 cttgcattat gtagttaaat cttactttcc tgcttctagt agaatagttt actttaagga 960 atttttagtc actagggtta atacttggtt ttgtaaattt accaaagtag atacctatat 1020 tctgtacaag agtgttagac aagtagggtg tgatagtgat cagttctatg aggcgatgga 1080 agacgccttt gcttacaaga aaaccttggc catgttcaac actgaaagag caatctttag 1140 agacacggct tcggttaact tttggttccc taagatgaag gacatggtga tagtaccgct 1200 gtttgagggt tctattacca gcaaaaagat gacaaggagt gaggtcattg ttaatcgtga 1260 cttcgtttac acagtgctta atcatatcag aacatatcaa gccaaagcgt taacttacca 1320 gaacgtatta tctttcgtgg agtctataag atcccgcgtg ataatcaatg gtgttactgc 1380 taggtctgaa tgggatgtag ataaagcaat tcttcaaccc ttgtcaatga ctttcttctt 1440 gcagactaag ctggctgcgc ttcaagacga tatagtaatg ggaaagtttc ggtgcttgga 1500 taagaccact tctgaactta tttgggatga ggtgggaaaa ttttttggaa acgttttccc 1560 cactatcaaa gagagattgg tgagcaggaa aattctggat gtaagtgaga atgctctgaa 1620 gatcaagatc ccagatctgt atgtcacatg gaaagacagg ttcgtagctg aatacaccaa 1680 gtctgaggag ttaccgcatc tagatatcaa gaaggactta gaagaagctg agcaaatgca 1740 cgacgcgtta tcagaattat ctatccttaa gggtgctgat aatttcgata tcgcgaagtt 1800 caaagacatg tgcaaggctt tagatgttag tcctgatgtg gcagcacgag taatcgttgc 1860 agtggccgag aatagaagcg gtttgactct tacttttgat aagccaaccg aggagaatgt 1920 ggctaaggct cttaaaagca cggcgtctga ggccgtggta tgtcttgaac cgacatccga 1980 agaggtgaac gtaaataaat tttctattgc tgagaaaggg agattgcctg tgtgtgcaga 2040 aagtcatggt ttgacgaatg ctaacttaga gcaccaggag ttggagtccc tcaacgattt 2100 ccataaggct tgcgtggata gtgtgattac aaagcaaatg gcatcggttg tctacactgg 2160 ctcactcaaa gttcaacaaa tgaagaacta tgtggacagt ttggcagctt cgttgtccgc 2220 cactgtatca aatctatgca agtcactaaa ggatgttgtc gggtatgatt ctgattccag 2280 ggagaaagtt ggtgtttggg atgtcacttt gaaaaagtgg ctcctcaaac ctgcggccaa 2340 aggtcattca tggggagttg tcctggatta caagggaaaa atgtttactg cacttctatc 2400 ttatgaagga gatagaatgg tgactgagag cgactggagg agggtggctg tatcatctga 2460 tacaatggta tattctgata ttgcaaagct ccaaaatctg aggaaaacaa tgagagacgg 2520 tgaaccccac gaacctactg caaagatggt acttgtggat ggggtgcctg gttgtggaaa 2580 gacaaaggag attttggaaa gagttgatct tgatgaggat ttgatcttgg ttcctggaaa 2640 acaagctgct gctatgatca gaagaagggc taattcatct ggactgataa gagccacaat 2700 ggacaatgtg agaacggtag attcatttct aatgcatcca aaaccgcgat cacacaagag 2760 gctttttatt gatgaagggt tgatgctgca caccggttgt gttaacttcc tggtgcttat 2820 ctctggttgc gacatcgcat acatttacgg agatacacag cagattcctt tcattaacag 2880 agttcagaat ttcccgtatc ccaaacattt tgagaagctg caagtggatg aagttgagat 2940 ggggaggacc acattgagat gcccaggtga tgtaaatttt ttcctacaat cgaagtacga 3000 aggagcggtg acaaccactt caactgtaca acgatcggtc tcatctgaga tgataggcgg 3060 taagggagta ctaaacagtg tttccaaacc actaaaaggg aaaattgtaa ctttcactca 3120 ggctgataaa tttgagttag aggagaaggg ctataagaat gtgaacaccg ttcatgagat 3180 ccaaggagaa acctttgaag atgtgtcgct ggtcagattg acggcaactc cactgactct 3240 gatttccaag tcttccccgc atgttctagt cgctctgact agacacacaa agagcttcaa 3300 atattacacc gtagtgttag atcctttagt acagataatt agtgatttgt cttctttaag 3360 ctccttcctt ttagaattgt atatggtaga agcaggtagt agatagcaat tacagatgga 3420 tgcagtgttc aaaggtcata atctctttgt ggcaacacct aaatcaggag actttccaga 3480 tctacagttc tattacgatg tatgcccccc tggtaatagt actatactta acaagtatga 3540 tgctgttacc atgaggttac gtgataatag tcttaatgtg aaggattgtg ttcttgattt 3600 ttccaaaagt attccgatgc caaaggaggt gaaaccatgt ctagagccag ttttgcgtac 3660 cgcggcggaa ccgccaaggg ctgcaggact actcgaaaat ctggttgcaa tgattaaaag 3720 aaatttcaac gcaccagacc tgacggggac gattgacatt gagagcaccg catctgttgt 3780 agtagataag ttttttgata gctattttat taaaaaagaa aaatacacaa aaaatattgc 3840 tggagtgatg acgaaggatt caatgatgag atggttggga aaacaggaaa gaagtactat 3900 tggacagttg gctaactaca attttgtaga tctgccggcc atcgatcagt acaagcacat 3960 gatcaaggct caaccaaaac agaaattgga cctttcaatt cagaatgaat accctgctct 4020 gcaaacaatt gtctaccatt cgaagcagat caacggtatt tttggcccgg ttttctcaga 4080 gcttacaagg ttgctgctcg aggcagttga ttctcagaag tttcttttct ttactaggaa 4140 aactccagaa cagattcaag aatttttctc ggatctcgac tcgcacgttc ctatggatgt 4200 gttagaactg gatatttcta agtatgataa gtcacagaac gagtttcatt gtgctgtaga 4260 gtatgaaata tggaaaagat tgggtctcaa tgagtttttg gccgaagtgt ggaaacaagg 4320 gcacaggaaa acaactttga aggattacat tgctggaatc aagacatgtc tgtggtatca 4380 aaggaaaagc ggtgatgtga ctactttcat cggcaatact gttataatag cagcttgctt 4440 gggttcaatg ttaccgatgg aaaaggtcat aaaaggtgct ttttgtggag acgattccgt 4500 tttgtatttt ccaaagggtt tggatttccc tgacattcag tcatgtgcta atctcatgtg 4560 gaattttgag gccaaactgt atagaaagag gtacggttac ttttgtggta gatacatcat 4620 acaccatgat aagggagcaa tagtgtatta tgatcctttg aagttgatct ccaaacttgg 4680 ggcaaaacat atcaaggatt atgatcactt agaagagtta agggtgtctt tgtgcgatgt 4740 tgcttgttcg ctcggaaact gcgcttactt tccgcagctg aacgcagcta tcaaggaggt 4800 tcataaaacc gcgattgatg gttcgtttgc ttttaattgt gttaacaaat ttttgtgtga 4860 taaattttta tttagaactt tgtttttaaa tggctgttag tctcagagat actgtcaaaa 4920 ttagcgagtt cattgatctt tcgaaacagg atgagatact tccggcattc atgactaagg 4980 tcaagagtgt tagaatatcg actgtggaca agattatggc tgttaagaat gatagtcttt 5040 ctgatgtaga tttacttaaa ggtgttaagt tagttaagaa tgggtatgtg tgcttagctg 5100 gtttggtagt gtctggggag tggaatctcc cggataactg ccgtggtggt gtcagtgttt 5160 gtattgtaga taagagaatg aaaaggagta aggaagcaac gctgggtgcg tatcacgccc 5220 ctgcttgcaa aaagaatttt tcttttaagc taatccctaa ttattcaata acatccgagg 5280 atgctgagaa gcacccgtgg caagtgttag tgaatatcaa aggagtggct atggaagaag 5340 gatactgtcc tttatctttg gagttcgttt caatttgtgt agtacataaa aataatgtaa 5400 gaaaaggttt gagggaacgt attttgagtg tgacagacgg ctcgccaatt gaactcactg 5460 aaaaggttgt tgaggagttc gtggatgaag taccaatggc tgtgaaactc gaaaggttcc 5520 ggaaaacaaa aaagaaagtg gtaggtaata atgttaataa taagaaaata aataatagtg 5580 gtaagaaggg ttttaaaatt gaggaaattg aggataatgt aagtgatgac gagtctatcg 5640 cgtcatcgag tacgttttaa tcaatatgcc ttatacaatc aactctccga gccaatttgt 5700 ttacttaagt tccgcttacg cagatcctgt gcagctgatc aatctgtgta caaatgcatt 5760 gggtaaccag tttcaaacgc aacaagctag gacaacagtc caacggcaat ttgcggatgc 5820 ctggaaacct gtgcctagta tgacagtgag atttcctgca tcggatttct atgtgtatag 5880 atataattcg acgcttgatc cgttgatcac ggcgttatta aatagctttg atactagaaa 5940 tagaataata gaggttgata atcaacccgc accgaatact actgaaatcg ttaacgcgac 6000 tcagagggta gacgatgcta ctgtagctat aagggcttca atcaataatt tggctaatga 6060 actggttcgt ggaactggca tgttcaatca agcaggcttt gagactgcta gtggacttgt 6120 ctggaccaca actccggcta cttagctatt gttgtgagat ttcctaaaat aaagtcgctg 6180 aagacttaaa attcagggtg gctgatacca aaatcagcag tggttgttcg tccacttaaa 6240 tataacgatt gtcatatctg gatccaacag ttaaaccatg tgatggtgta tactgtggta 6300 tggcgtaaaa catcggagag gttcgaatcc tcccctaacc gccggtagcg gccca 6355 //