ID EF589098; SV 1; linear; genomic RNA; STD; VRL; 3949 BP. XX AC EF589098; XX DT 11-APR-2008 (Rel. 95, Created) DT 11-APR-2008 (Rel. 95, Last updated, Version 1) XX DE American grass carp reovirus strain AGCRV_PB01-155 segment 1, complete DE sequence. XX KW . XX OS American grass carp reovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-3949 RX DOI; 10.1016/j.virol.2007.12.006. RX PUBMED; 18191982. RA Mohd Jaafar F., Goodwin A.E., Belhouchet M., Merry G., Fang Q., RA Cantaloube J.F., Biagini P., de Micco P., Mertens P.P., Attoui H.; RT "Complete characterisation of the American grass carp reovirus genome RT (genus Aquareovirus: family Reoviridae) reveals an evolutionary link RT between aquareoviruses and coltiviruses"; RL Virology 373(2):310-321(2008). XX RN [2] RP 1-3949 RA Mohd Jaafar F., Goodwin A.A.E., Belhouchet M., Merry G., Fang Q., RA Cantaloube J.F., Biagini P., De Micco P., Mertens P.P.C., Attoui H.; RT ; RL Submitted (02-MAY-2007) to the INSDC. RL Arbovirology, Institute for Animal Health, Ash Road, Pirbright, Woking, RL Surrey GU24 0NF, UK XX DR MD5; f3bca649f41e0d67090e9c891d6afa53. DR EuropePMC; PMC3147939; 21593159. XX CC GenBank Accession Numbers EF589098-EF589108 represent the complete CC genome of American grass carp reovirus strain AGCRV_PB01-155. XX FH Key Location/Qualifiers FH FT source 1..3949 FT /organism="American grass carp reovirus" FT /segment="1" FT /host="Ctenopharyngodon idella" FT /strain="AGCRV_PB01-155" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:465447" FT CDS 14..3910 FT /codon_start=1 FT /product="VP1" FT /note="capping enzyme; Cap; guanylyl transferase" FT /db_xref="GOA:B2BND9" FT /db_xref="InterPro:IPR010311" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/Swiss-Prot:B2BND9" FT /protein_id="ABV01039.1" FT /translation="MAAVYGIQLVNKLNTATVRRTYLPNRYDILIDRLTNHTQHNVLHR FT ALDFNATTREATVVQLYPPLNAWTPSSATNVTDYTYLEWVDFIQERSTTFSEVLRQRYP FT ITTYANRFVNPLVVGAAFSDFLNADDISVYLEHLFYDPRVESPVQAILSFPYQWTPRFH FT VFQEFIRTGAGCKYARSSRDMTPPTPARLPRYGKHRPAYATVFYYNTLAARSTILAGIS FT AGPTALEHFDSPTYGPHIILPQAGDVLGYHSRPVSQADLLMTESVMDCLRENSQASAST FT AVARLDQTYHPVANFDPTNEDSMMSRLTNLALLVVQGAQAELAIPTVPTNDDVRGFVAR FT LMSEGQRQRWFPYRTDRVLIHPDSPFVLPPGDFYAAYRVANFPFTSGTYTSVPNATKPL FT RVLPQYRAATILPAQATQAYEDHVIAPININHGYCISGGVYFTADDISIDPTPFPARDL FT AQLPQNYFDPNRMARRELLRRLRVPSDRSYLKDNAVFTFLASLVNPATALPALQPGFSL FT AYLGASAAHAKSDEPTILADLRNGSIPGLPIPSRIAQFGYDVVHGSLLDLTRAVPTGTF FT GLVYADLDQVEDAGTDLPAANRAALAMLGTTLQMCTAGGVAVLKVNFPTVEFWTQLFNQ FT YATFATTLHVVKPIVVNSSEVFVVMSGRQSAGNLTCTTSLQRALLAMYARNAAIDQTMT FT HVPMLGQADDGTSALGMEAIRLFDPLFVEGNPNAATSALATLMANVVPSSIHMSRLPVN FT GPVSTTIFGKRTFLSTRRRDRLLEYPLPMVTAINHQRRFTAPPSFSIYPTEPVNVTTLV FT AAGYNAYVHTVITSAQPAHLFDLGTGPECRILSLVPQNTRVTMVDSRPCAELMQAYDPN FT TTAYEQADYTLAAFWNGRQCDAVSAIFTLGAAAASNAVTIDALLANLLPSIANAGTTRL FT WLQVNAPLAGPTPIPGLIDIDTRAGTYTFNNGERTEPYIDPQVMQATVLAHFPNATLSW FT YTLPPTCEWLDYIIGAGSSLDLSTIPTALQYSQLTPILSIDTNVAPLRVNPIPTPLGQQ FT CAIRIPTNDPAAVLDAKHRGVPVITGTPAALTSLMGNAALQYIQANNEFLLQLTPTLAG FT IFDVTLTSAGQPPIPRGSFTITAPPPTAAVTMPANIDYTDAGNDGPIACDPYYNLAVCI FT MRNGQYVRVNPEKARVETVAAGRALHFVLDLADNHVLMYLCDVTPAAIGAIIAHPLADI FT YQLVFPNNTPLRASLPYIGGGARVELNNQPYLSLTNPPPVLPAGTALAALATAASVGQP FT TYTLPAGAYRYVLE" XX SQ Sequence 3949 BP; 933 A; 1306 C; 856 G; 854 T; 0 other; gttttaaagc ataatggctg cggtttatgg cattcaacta gtcaacaaac tcaacactgc 60 gacagtacgt cgtacttact taccaaacag atacgatatc ctcattgacc gcctcaccaa 120 ccatacacaa cacaacgtac tccaccgcgc attggacttt aatgccacta cgcgagaagc 180 tacagtagtg caattgtatc ccccactcaa cgcatggacg ccctccagtg ccactaacgt 240 cacggactac acctacctcg aatgggtgga tttcattcag gaacgttcga ccactttctc 300 ggaagtgctg cgccaaagat atcccattac cacatatgca aatagattcg tcaatccgct 360 tgttgtagga gctgcgtttt cagacttctt aaacgctgac gatatcagtg tgtatctcga 420 acacctcttc tatgatccac gtgtcgagtc ccccgtccag gccatcctga gctttcctta 480 ccaatggact cctcgatttc acgtgtttca agagttcatc cggactggtg ctggctgcaa 540 atacgctcgg tcctcaaggg atatgacccc accaaccccg gcacgcctgc cacgttacgg 600 caagcaccgc cccgcttatg ccactgtgtt ctactataat accctggccg ccaggtccac 660 gatcctagca ggaatcagtg ccggtccaac agctctcgaa cacttcgact ccccaacgta 720 cggtccacac atcatattgc ctcaagccgg ggatgtactt ggttaccact cacgtccggt 780 atcacaagct gacctcttaa tgacggaatc agtcatggac tgtctgcgtg agaattcaca 840 agccagcgca tcgactgcag tggcgcgtct cgaccaaacc taccaccccg tggccaactt 900 tgatcccact aacgaagatt caatgatgtc gcgtctcacc aatctagccc ttctagtcgt 960 ccaaggtgcc caagctgagc tggccatacc taccgtgccc acaaatgatg acgtcagagg 1020 attcgtagcg aggttaatgt ccgagggtca acgccaacga tggttcccat accgtacgga 1080 tcgagtactc atccatccgg attcgccctt cgttctgccg cccggagact tctacgcagc 1140 atacagagtg gcgaacttcc ccttcacctc cgggacgtac actagtgtac ccaacgcaac 1200 taagccgctg cgagtactgc cccagtaccg tgccgccacc attcttcccg ctcaggccac 1260 acaagcctat gaggaccacg ttatcgcccc catcaatatt aatcacggtt actgcatcag 1320 tggaggagta tatttcaccg ccgacgacat cagcatcgat cccacaccct tcccagcgcg 1380 ggacctagcc caattacctc agaactattt cgaccccaac cgcatggcga gaagggagct 1440 gctgcgtcgc cttcgtgtcc ccagtgatcg ctcatacctc aaggacaacg ccgtgttcac 1500 tttcctcgct tccttggtaa atcctgccac cgcgctaccc gccttacaac ccggattctc 1560 actggcatat ctcggagcgt ccgctgcaca tgctaagtcc gatgaaccga ccatcctagc 1620 ggacctccga aacggttcca ttccagggct acccatacct agcaggatcg cccagttcgg 1680 atacgatgtc gtccatggat cactcctgga tctaacacgc gccgtcccca caggcacttt 1740 cggtttagtc tatgccgacc tcgaccaggt agaagatgcc ggtacggatc tcccagctgc 1800 taaccgtgct gcactggcca tgctcggaac gactctccag atgtgcactg caggtggtgt 1860 cgccgtcttg aaagtcaact ttcccactgt agagttctgg acccaactgt tcaatcaata 1920 cgccactttc gcaacaacgt tgcacgtagt caaacccata gtggtcaact ccagcgaggt 1980 gttcgtcgtc atgtcaggac gtcaatcagc tggtaatcta acctgtacca cttcactgca 2040 gagggccctc ttggcgatgt atgcccgcaa cgccgctatt gaccaaacca tgacgcacgt 2100 gcccatgttg ggtcaggcag acgacggaac ctcagccctt ggaatggagg caatacgact 2160 attcgatcca ctattcgtgg agggtaaccc gaacgcggct acctcagcgc tggccacgct 2220 catggcgaat gtagtaccat cctcaattca tatgtccagg ttgcccgtca acggtccagt 2280 atcgaccacc atcttcggca aacgtacgtt tctgagcacc agacgccgag acaggctgtt 2340 ggaataccca ctgcccatgg tcaccgcaat taaccaccag cgccggttca cggccccacc 2400 atcattcagc atctacccga ccgaacctgt caatgtgacc accctcgtcg ctgccggata 2460 caacgcctat gtgcatacgg ttattaccag cgcccagcct gcccacctat tcgacctcgg 2520 tacaggccct gaatgtcgca tactatccct ggttccccaa aacacacgtg tgacaatggt 2580 ggactcccga ccctgcgcgg aactaatgca agcctacgat cccaacacca cagcgtacga 2640 gcaagcggac tacaccctcg ccgcattttg gaatggacgt caatgtgatg cggtatcagc 2700 catcttcaca ctaggcgctg ctgcagcatc gaatgctgtt accattgacg cattattggc 2760 gaacttgctt ccctcgatag ccaacgctgg cacaacacga ctgtggctgc aagtcaacgc 2820 acccctggct ggtcccactc ctatcccggg ccttatagat atagacacca gagcgggtac 2880 ctatacattc aataacggag agcggactga gccgtacatt gacccccagg tcatgcaagc 2940 aacagtatta gcccattttc ccaatgctac tctgtcatgg tacaccctac cacccacgtg 3000 tgaatggtta gactacatta tcggagccgg ctcgtcactg gacctatcta ccatccccac 3060 tgctctgcag tattcgcaac tcaccccgat cttgtcaatc gataccaacg tagcacctct 3120 acgcgtcaat ccgataccca cacctctggg tcagcagtgt gcgattcgca ttccaacaaa 3180 cgatcccgcg gcagtgctag atgcgaaaca cagaggcgtg ccagtcatca cagggacccc 3240 agccgcacta acgtcactga tgggtaatgc cgccctgcag tacatccaag ccaacaacga 3300 gttcctgcta cagctgactc cgaccctcgc cggaatattt gatgttacgt taacgtccgc 3360 tggccaacca cccatcccca gagggtcctt cacaatcaca gcaccaccac ccacggccgc 3420 tgtcactatg cccgctaaca tcgattacac cgacgctggt aatgacggcc ccatcgcctg 3480 tgacccctac tataatctag ccgtgtgcat aatgagaaat ggccagtacg tcagggtcaa 3540 tcctgagaaa gccagggtag agacggttgc cgctggacgc gcattacatt tcgtactaga 3600 ccttgccgat aatcatgtgc tcatgtacct ctgcgatgtc acccccgccg ctataggagc 3660 gataatcgcg catcccctgg ccgacatcta ccaattagta ttcccgaaca acacgcctct 3720 aagagcatca ttaccgtaca taggcggcgg agcgcgcgtg gaactcaaca accagccata 3780 cctgtcccta accaatccac cacccgtgct acccgctggt accgccctgg ccgcgctcgc 3840 cactgccgcc tcagtaggcc aaccgaccta cactctcccc gccggtgcgt accgttacgt 3900 gcttgagtga gactagtcgc cctctctgtc agccagcttt actttcatc 3949 //