ID EU625350; SV 1; linear; genomic RNA; STD; VRL; 3783 BP. XX AC EU625350; XX DT 23-JUL-2008 (Rel. 96, Created) DT 01-APR-2009 (Rel. 100, Last updated, Version 2) XX DE Tomato chlorosis virus segment RNA2 HSP70-like protein gene, partial cds; DE and p8, p59, p9, and CP genes, complete cds. XX KW . XX OS Tomato chlorosis virus OC Viruses; Riboviria; Closteroviridae; Crinivirus. XX RN [1] RP 1-3783 RX DOI; 10.1111/j.1365-3059.2008.01959.x. RX AGRICOLA; IND44175915. RA Jacquemond M., Verdin E., Dalmon A., Guilbaud L., Gognalons P.; RT "Serological and molecular detection of Tomato chlorosis virus and Tomato RT infectious chlorosis virus in tomato"; RL Plant Pathol. 58(2):210-220(2009). XX RN [2] RP 1-3783 RA Jacquemond M.; RT ; RL Submitted (09-APR-2008) to the INSDC. RL Unite de Pathologie Vegetale, INRA, Domaine Saint Maurice, Montfavet 84143, RL France XX DR MD5; 3fae82d747af573bd02225ed854a0b03. XX FH Key Location/Qualifiers FH FT source 1..3783 FT /organism="Tomato chlorosis virus" FT /segment="RNA2" FT /host="Lycopersicon esculentum" FT /isolate="Fr" FT /mol_type="genomic RNA" FT /country="France:Bouches-du-Rhone" FT /collection_date="2003" FT /db_xref="taxon:67754" FT CDS <1..1074 FT /codon_start=1 FT /product="HSP70-like protein" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:B4YNR9" FT /protein_id="ACF42328.1" FT /translation="GGGTFDTSLIVRYGKFVTVADTQGDSFLGGRDIDKAISKFIMDKN FT ALNTPLSADMLASIKEETNSTGRSSYNIISDDGSIINIQFTFDDLVKCVEPFARRSFSI FT LRSLVSRNKTSNGALFLVGGSSLLRPIQNRADGFARNHGLALIIDPDLRAAVSFGCSML FT HAQEDSGNMTYIDCNSHPLMDLGLYCHPRIIIRKPMSVPYTHKIEREVTRFITTALNVY FT EGSDLFVLNNDWLISADVDYSKYAKMGETLVSVYKYTIDGILELSMANKTTGKSWVLPN FT TFARSEKIVISDLTLTQLSNVDELATIVSILSYFDTTFNYLISMFNTPSIFEREVGKIS FT DAKGLYNRLVEQNRNFS" FT CDS 1084..1287 FT /codon_start=1 FT /product="p8" FT /db_xref="UniProtKB/TrEMBL:B4YNS0" FT /protein_id="ACF42329.1" FT /translation="MLVCLVLRTNCLIKVLYFSDTPIVESGPLVIRSSDPTIIEDLLEY FT LPFVTESWSPLILPKESKDFSQ" FT CDS 1239..2792 FT /codon_start=1 FT /product="p59" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:B4YNS1" FT /protein_id="ACF42330.1" FT /translation="MEPVDTSERVKRLFSVVFKKSNNDEKIHKLADYLLKYYSTENRNL FT YRTTINNRAFSFTSTYSVSGGKVYLDTKEPWQVVKLIIIYLYKVEPGYLKKTNYAPENL FT FARLRFDDYYDEWNKYFDKDVNDYLADHPEEGCLYTMNDIVKEYPGEEPTAQLTLYRVC FT NSLGKKISVRELKEGKISAFKIESKTDNAEIGEGVGGNALFKECVETLQSYLLLNSSKA FT GREKIRANAKIFECYLSSLVPKGLDKKLAANPLVVAKFVNAFTVRTVNSKGFGDNFKAV FT KELSPEILSFIKRVFLVDARLNEDVLFIALPKNSVVEILGDKFAVGEYLRVQNVLPASS FT NSSSLPPDIDKCVSDALVTFMRSFGNFQPAFILDIWLFVFGKMTTNSKLWREDNEILVT FT VGDVVVKSTTSRLLSHVKNCVKRDFPQFSTDNIIRQWANLRGDRAKQMFQLMNFRPGLF FT SSIPGIKPYMRFDFFKMLDLSKCTREEIESYQTLRRVTESRSNKTACDDRCLESWILRK FT " FT CDS 2774..3010 FT /codon_start=1 FT /product="p9" FT /db_xref="UniProtKB/TrEMBL:Q4KRY5" FT /protein_id="ACF42331.1" FT /translation="MDLEEMIKELGLAKVERFLTVYNQGRFVAFGNIETLLCLINQHFV FT EFNPQRAKLDIELSEVRDFLRCFESFRSFGLRK" FT CDS 3010..3783 FT /codon_start=1 FT /product="CP" FT /db_xref="GOA:B4YNS3" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B4YNS3" FT /protein_id="ACF42332.1" FT /translation="MENDAVTNTGDNGGSRNPLVRPLDDSVDDEVQNLGRRDDSTSLIP FT ANPNRSSSWALLNPDTINYNELRKLKVHSTRGDTLTLTQEEEFEKILESFCRRIIGETP FT MTDKIFAGFYMSMCQAIVNQGTSVKAAGNNSLENYFEVDGARFKWKTPDLINEVRPKMS FT DVPNAIRRYARSHEKIIQDFINSGLIKPDYHLQFKHGVLPSHVFGTGDYINGSLMNISD FT DQLISNLLMKRNALCKGNEGKELYNVNQLASITGC" XX SQ Sequence 3783 BP; 1096 A; 670 C; 875 G; 1142 T; 0 other; ggtggcggta ctttcgacac ttctttaata gtgagatatg gtaagtttgt cactgttgct 60 gatacccagg gagattcgtt tcttggtggg cgagatatag ataaagccat atcgaagttc 120 ataatggaca aaaatgcttt gaacacccca ctgtcggcag atatgttagc gtctataaag 180 gaagagacaa attctaccgg gcgcagttca tacaatataa taagtgatga tgggagtata 240 atcaatattc agttcacgtt tgacgatttg gtcaagtgcg ttgaaccatt cgctagacgc 300 agtttttcaa tacttcgaag tctcgtttct cgtaacaaaa cttcgaatgg agcgctgttt 360 cttgtcggtg gttcttcatt gcttagaccg attcagaata gagcagatgg ttttgcgcgt 420 aatcatgggt tggctctcat tatagaccca gatctcagag ctgccgtgtc atttggttgt 480 tcaatgctcc acgcacaaga ggattctggg aatatgacat atatagactg caattcacat 540 ccgttgatgg atttgggttt atattgtcat cctaggatta tcatcagaaa acccatgtct 600 gttccgtaca cacacaagat tgagagggag gtcacaagat ttatcaccac tgctctcaat 660 gtttatgaag ggtctgacct tttcgtactt aacaacgact ggttaatcag cgcagatgtt 720 gactattcaa agtatgctaa aatgggtgag acattagtta gtgtttataa gtacaccatt 780 gacggcattt tggaactgtc gatggctaat aaaaccactg gcaagtcgtg ggtccttccg 840 aacacctttg ccaggtccga aaagatagtc attagtgatt taaccttgac tcaattgtcg 900 aatgtcgatg aattggccac tatagtgtca attttgagtt attttgatac aacattcaac 960 tatcttattt ccatgttcaa cactccgtcg atttttgagc gagaagttgg aaagatatct 1020 gacgccaaag gtctttataa ccgactcgtt gaacaaaaca gaaatttctc ttgaaggttt 1080 gttatgttag tttgtttagt actgagaact aactgtctta ttaaagtctt gtatttctct 1140 gatactccaa ttgtcgagtc cggcccatta gtaataagaa gctcagatcc gaccattata 1200 gaagaccttc tagagtactt acctttcgtc actgagtcat ggagcccgtt gatacttccg 1260 aaagagtcaa aagacttttc tcagtagtat tcaagaaatc gaacaacgat gagaagattc 1320 ataaattggc tgattacctc ttgaaatatt attcaacgga aaacagaaat ttgtatagga 1380 cgaccattaa taatagagct ttctctttta cttctacata ttcggtctct ggtggtaaag 1440 tttatctcga caccaaggaa ccttggcagg ttgtgaagct gatcatcata tatttgtaca 1500 aggtagagcc tggttatctt aagaaaacta actacgctcc cgaaaatctt ttcgctagat 1560 tgaggttcga tgattattac gatgagtgga ataagtattt tgacaaggat gtcaacgatt 1620 atcttgccga ccatcctgaa gagggatgtt tgtacaccat gaacgacatt gtgaaggaat 1680 atccgggtga agaaccgact gcacaactaa ctctgtacag ggtttgtaac tcgcttggaa 1740 aaaagatatc ggttcgagaa cttaaggagg gaaaaattag tgcttttaaa attgagtcaa 1800 aaactgataa cgctgaaatt ggagaaggtg ttggtggtaa tgctctgttc aaagagtgtg 1860 ttgagacttt gcagagttat ttgctcttga attcttccaa agcggggcgg gagaagatcc 1920 gcgctaatgc taagattttt gagtgctatt tgtcgagtct ggttccaaaa ggtctagata 1980 agaaattagc ggcgaatcca ttggttgtgg ctaaattcgt taatgcgttt acggtccgga 2040 ctgtgaacag caagggattt ggtgacaatt ttaaggccgt gaaggaattg tctcctgaaa 2100 ttttgagttt catcaagaga gtgtttttgg ttgacgccag gcttaatgaa gatgtgttgt 2160 ttatagcact cccgaagaac tctgtagttg agattcttgg tgacaaattt gctgtcggtg 2220 aatatttaag agtgcaaaat gttttgccag cttcgagcaa ctcaagtagc ctcccaccag 2280 atatcgataa gtgcgtgtct gatgccttgg ttactttcat gcggtcgttc ggtaattttc 2340 aaccagcctt catactagat atttggttat ttgtgtttgg gaagatgacc accaattcca 2400 aactttggag agaggataat gagatcctag tgacggtggg ggacgtagtt gtgaaatcaa 2460 ctaccagtag gttattgtca catgtgaaaa actgtgtcaa acgggacttt ccccagttct 2520 cgaccgacaa tataatcaga cagtgggcta atttgagggg tgacagagcg aagcaaatgt 2580 ttcaattgat gaacttcaga cccggtttgt tttcgagtat accgggtatc aaaccgtata 2640 tgcgcttcga cttctttaag atgttagatt tgtcgaaatg tactcgtgaa gaaattgaaa 2700 gttatcaaac attacgtcgg gtgacggaaa gtaggtccaa taagactgct tgtgacgata 2760 ggtgtttgga gtcatggatc ttgaggaaat gatcaaagag ttaggtctgg ctaaagttga 2820 gagatttctc actgtctata atcaaggtag gtttgtagct ttcggaaata tagaaactct 2880 actctgcctg attaatcaac attttgtgga gtttaatcct caaagagcta aactggacat 2940 tgaattgtct gaagtgagag atttcttgag gtgttttgaa tcttttagaa gctttggttt 3000 aaggaaataa tggagaacga tgctgttaca aacactggtg ataacggtgg cagccgcaat 3060 cctctggtta gaccgttaga tgatagcgta gatgacgagg tgcagaactt aggcaggagg 3120 gacgattcga catctctcat tccggctaat cctaatcgat cttccagttg ggctttgttg 3180 aacccggata ctattaatta taacgagtta aggaaattga aggtacactc cactaggggt 3240 gatactctta ccttgactca ggaagaggag ttcgagaaga tactcgaatc cttctgcagg 3300 cgaataatcg gtgagacccc gatgacagat aagattttcg ctggtttcta catgtctatg 3360 tgtcaggcca ttgtaaacca agggacctca gttaaagcag ccggtaataa cagtcttgaa 3420 aattactttg aggtagatgg cgcgagattt aagtggaaaa ctccggattt gataaatgag 3480 gttagaccca aaatgtccga tgttccaaac gctatacgtc ggtacgccag gagtcatgaa 3540 aagattattc aggattttat taactccggt cttattaagc ctgattatca tttacaattc 3600 aaacatggcg tattaccaag ccatgtgttt ggtaccggcg attatataaa tggttcgttg 3660 atgaatatct cagatgatca acttatctcg aacctgctta tgaaaagaaa cgctttgtgc 3720 aagggtaacg agggcaagga actgtacaac gttaaccagc ttgcatcgat aactggttgc 3780 taa 3783 //