ID EU685328; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC EU685328; XX DT 29-DEC-2008 (Rel. 98, Created) DT 29-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE African cassava mosaic virus isolate ACMV-CM[NG:Cc:03] segment DNA-A, DE complete sequence. XX KW . XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RX DOI; 10.1007/s00705-008-0169-8. RX PUBMED; 18661095. RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava Kumar P., Dixon A.G., RA Hughes J., Naidu R.A.; RT "Alternate hosts of African cassava mosaic virus and East African cassava RT mosaic Cameroon virus in Nigeria"; RL Arch. Virol. 153(9):1743-1747(2008). XX RN [2] RP 1-2781 RA Alabi O.J., Ogbe F.O., Bandyopadhyay R., Lava-Kumar P., Dixon A.G.O., RA Hughes J., Rayapati N.A.; RT ; RL Submitted (01-MAY-2008) to the INSDC. RL Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser, RL WA 99350, USA XX DR MD5; f5891e359efca7c42f66998e833a3366. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus" FT /segment="DNA-A" FT /host="Combretum confertum" FT /isolate="ACMV-CM[NG:Cc:03]" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /db_xref="taxon:10817" FT gene 136..>210 FT /gene="AV2" FT CDS 136..>210 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B8QSH8" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:B8QSH8" FT /protein_id="ACF42214.1" FT /translation="MWDPLVNEFPDSVHGLKCMLAIKYL" FT gap 211..800 FT /estimated_length=590 FT gene complement(<801..997) FT /gene="AC5" FT CDS complement(<801..997) FT /codon_start=1 FT /gene="AC5" FT /product="unknown" FT /db_xref="GOA:B8QSH9" FT /db_xref="UniProtKB/TrEMBL:B8QSH9" FT /protein_id="ACF42215.1" FT /translation="MSTCHVQQQRILCVILILPCLLMIICHVMIQPVKPFNQSLLLHAR FT WTTNNRGRISSNLKPYPSNVL" FT gene complement(1060..1464) FT /gene="AC3" FT CDS complement(1060..1464) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:B8QSI0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8QSI0" FT /protein_id="ACF42216.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFRILTTLRPQTGLFLRVFRYQVLKYLDSMGVISINN FT VIRAADHVLFNVIAKTIECQLTHEIKFNVY" FT gene complement(1205..>1501) FT /gene="AC2" FT CDS complement(1205..>1501) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:B8QSI1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8QSI1" FT /protein_id="ACF42217.1" FT /translation="GCSYYLHINCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQ FT APTTTIPAEPGHHNSPGSIQSQPAEGAGDSQMFSQLQDLDDLTASDWSFLKSL" FT gap 1502..1980 FT /estimated_length=479 FT gene complement(<1981..2603) FT /gene="AC1" FT CDS complement(<1981..2603) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:B8QSI2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8QSI2" FT /protein_id="ACF42218.1" FT /translation="MRPPCFRVQAKNFFLTIPQSFLYPKNPCCHSFKHYLSHQTLTFIK FT ICRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTTFHPNIQGGKSSSDVKSYL FT DKDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFH FT NLNSNLDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADNVRDSA" FT gene complement(2144..2446) FT /gene="AC4" FT CDS complement(2144..2446) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="host activation protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B8QSI3" FT /protein_id="ACF42219.1" FT /translation="MGNLTCMPSSNSRAKSRLRTIVSSIVFTQAVAPLFIPTFKVANQA FT QMSSPIWIRTETPSNGDNFRSMGDLLEAVNNQRMMLTPKRLTAAVSPKLLMSFGN" XX SQ Sequence 2781 BP; 494 A; 322 C; 418 G; 478 T; 1069 other; accggttggc cccgcccccc tttaaacgtg gtccccgcac actacttatg tcggccaatc 60 atgcggtagc gttaaaggtt aattatgagt ggtggaccac tatatactta caggcgaagt 120 tgttgctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 180 cttaagtgta tgcttgcaat taaatatttg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 240 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 600 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 780 nnnnnnnnnn nnnnnnnnnn agaacgtttg agggataggg tttcaggttt gaggaaattc 840 tgccccggtt attggtggtc catctggcat gaaggagcag gctttgatta aaaggtttta 900 caggttgaat catcacgtga catataatca tcaggaggca gggaagtatg agaatcacac 960 agagaatgcg ttgctgttgt acatggcatg tactcatgcc tccaatcctg tatatgctac 1020 gttgaaaata cgtatatact tctatgacag tattggcaat taataaacat tgaattttat 1080 ttcatgagtc aactgacact caatagtttt tgcaattaca ttgaacaaaa catgatcagc 1140 agctctaatt acattgttaa ttgagataac acccatacta tccaagtatt taagtacttg 1200 gtatctaaag actcttaaga aaagaccagt ctgaggccgt aaggtcgtca agatcctgaa 1260 gttgagaaaa catttgtgaa tccccagctc cttccgcagg ttgtgattga atcgaacctg 1320 gactgttatg atgtcctggt tcagcaggaa tggtcgttgt tggtgcctgg tgattgtgaa 1380 atacagggga ttgtttattt cccaggtata cacgccattc attgcttgag gagcagtgat 1440 gagttcccct gtgcgtaaat ccatgattgg agcagttgat atggaggtaa tatgaacagc 1500 cnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1560 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1680 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1740 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1800 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1860 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1920 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1980 gcggaatccc taacattatc agcgacccat tcttcaagtt catcaggaac ttggtcaaag 2040 gaagaacatg ggaagggaga aacataagga gcgggtggct cctggaaaat cctatctaaa 2100 ttactattta gattatgaaa ctgaagtaca aagtcctttg ggactaattc ccgaatgaca 2160 ttaagagctt cggacttact gccgctgtta agcgctttgg cgtaagcatc attcgctgat 2220 tgttgaccgc ctctagcaga tcgcccatcg atctgaaatt gtccccattc gacggtgtct 2280 ccgtccttat ccagatagga cttgacatct gagcttgatt tgccaccttg aatgttggga 2340 tgaaaagtgg tgctacagct tgggtgaaca caatcgaaga gacgattgtt cgtaatcgtg 2400 attttgccct cgaattggat gagggcatgc aagtgaggtt ccccattctg atgcagctct 2460 cgacagattt taatgaacgt aagggtttga tgggagagat agtgtttgaa agaatgacag 2520 caggggttct ttgggtatag aaaactttgg ggtatggtga gaaagaaatt cttggcttga 2580 actctaaaac aaggagggcg catgttgacc aagtcaattg gagaaaacct caactagaga 2640 aaactcttga gcatctcccc cagttaattg gaaaaaataa aaagggggcc ctaaagggaa 2700 ttcttgtaat aagttgaact ttaatttgaa tgaaaaggct caaaaggcgc ggaacaccca 2760 aggggccaac cgtataatat t 2781 //