ID   FJ430662; SV 1; linear; genomic RNA; STD; VRL; 613 BP.
XX
AC   FJ430662;
XX
DT   16-DEC-2008 (Rel. 98, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 1)
XX
DE   Sugarcane yellow leaf virus isolate KER-IND-2 aphid transmission factor
DE   gene, partial cds; and coat protein and movement protein genes, complete
DE   cds.
XX
KW   .
XX
OS   Sugarcane yellow leaf virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-613
RA   Singh D., Rao G.P., Snehi S.K., Raj S.K., Viswanathan R.;
RT   "Sugarcane yellow leaf virus isolate associated with leaf yellowing and
RT   bright yellow midrib symptoms of sugarcane (Saccharum spp. hybrid) in
RT   India";
RL   Unpublished.
XX
RN   [2]
RP   1-613
RA   Singh D., Rao G.P., Snehi S.K., Raj S.K., Viswanathan R.;
RT   ;
RL   Submitted (31-OCT-2008) to the INSDC.
RL   Plant Molecular Virology, National Botanical Research Institute, Rana
RL   Pratap Marg, Lucknow, U. P. 226001, India
XX
DR   MD5; dbacf8ae6d74d08f81d696d6f9efb5c3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..613
FT                   /organism="Sugarcane yellow leaf virus"
FT                   /host="Saccharum hybrid cv. Co C671"
FT                   /isolate="KER-IND-2"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collection_date="Feb-2008"
FT                   /db_xref="taxon:94290"
FT   CDS             1..>613
FT                   /codon_start=1
FT                   /transl_except=(pos:589..591,aa:OTHER)
FT                   /product="aphid transmission factor"
FT                   /note="readthrough protein"
FT                   /db_xref="GOA:B7U4K7"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B7U4K7"
FT                   /protein_id="ACJ61716.1"
FT                   /translation="MNTGANRPRRNVRRRANRRRQTRPVVVVRPAAGPRRVRRRRARVG
FT                   GNAVRGPGGRSNRDVLTFTIDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKTFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDGSLAGQFVCRFECLFQNPKXVGDASPT"
FT   CDS             1..591
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B7U4K8"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B7U4K8"
FT                   /protein_id="ACJ61714.1"
FT                   /translation="MNTGANRPRRNVRRRANRRRQTRPVVVVRPAAGPRRVRRRRARVG
FT                   GNAVRGPGGRSNRDVLTFTIDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKTFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDGSLAGQFVCRFECLFQNPK"
FT   CDS             32..484
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:B7U4K9"
FT                   /protein_id="ACJ61715.1"
FT                   /translation="MSEDALTVVDRLGQWSWSGLPQDLDEYDDVEHVLEETLCEDREEE
FT                   ATGMFSLSRLTISRPTQPGSSNSDRTYLSTQRSTMAYSKPTMSIKSQVSQFSITHAPPT
FT                   QLQVQSHLKWIHPAPKQQQAPRLLASPSRGTPRKPSRPPSSGGKTS"
XX
SQ   Sequence 613 BP; 176 A; 169 C; 146 G; 122 T; 0 other;
     atgaatacgg gcgctaaccg tccacgaagg aatgtcagaa gacgcgctaa ccgtcgtcga        60
     cagactcggc cagtggtcgt ggtccggcct gccgcaggac ctagacgagt acgacgacgt       120
     agagcacgtg ttggaggaaa cgctgtgcga ggaccgggag gaagaagcaa cagggatgtt       180
     ctcactttca cgattgacga tctcaaggcc aactcaaccg ggatcctcaa attcggaccg       240
     aacctatctc agtacgcagc gttcaacaat ggcttactca aagcctacca tgagtataaa       300
     atcacaagtc tcacaattca gtataactca tgctcctccg acgcaactcc aggtgcaatc       360
     gcacttgaag tggatacatc ctgctcccaa acaacaacag gctccaagat tactagcttc       420
     cccgtcaaga ggaacgccaa gaaaaccttc ccggccccct tcatcagggg gaaagacttc       480
     atgactacat cagctgatca gttttggctt ttgtacaaag ggaatggaga cggaagccta       540
     gcaggacaat tcgtctgccg atttgaatgt ttattccaga atcccaaata ggtaggcgac       600
     gcttccccaa cac                                                          613
//