ID FJ561298; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC FJ561298; XX DT 01-DEC-2009 (Rel. 103, Created) DT 01-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Bhendi yellow vein Haryana virus [2003:Karnal] isolate OY76 segment DNA-A, DE complete sequence. XX KW . XX OS Bhendi yellow vein Haryana virus [2003:Karnal] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Venkataravanappa V., Lakshminarayanareddy C., Devaraju, Swarnalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of Begomoviruses infecting okra in India"; RL Unpublished. XX RN [2] RP 1-2740 RA Venkataravanappa V., Lakshminarayanareddy C., Devaraju, Swarnalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (18-DEC-2008) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX DR MD5; c3028671878e2746c96b4d63d0c7e0b6. DR EuropePMC; PMC3784899; 24426275. DR EuropePMC; PMC5127021; 27834936. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Bhendi yellow vein Haryana virus [2003:Karnal]" FT /segment="DNA-A" FT /host="okra OTH116 Bhendi cultivar" FT /isolate="OY76" FT /mol_type="genomic DNA" FT /country="India:Karnal, Haryana" FT /isolation_source="infected leaf" FT /collected_by="Dr. M. Krishna Reddy" FT /db_xref="taxon:658650" FT gene 120..485 FT /gene="AV2" FT CDS 120..485 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /note="pre-coat protein" FT /db_xref="GOA:D2DJ39" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2DJ39" FT /protein_id="ACT67435.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQNYSPDTVGYDLIRDL FT ILVLRAKNYGEASSRYRHFYARVESTSASELRQPIHQPCCCAHCPRHKTTGMDKQAYEQ FT EAQNVPDVQKSGCSKGM" FT gene 280..1050 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:D2DJ40" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D2DJ40" FT /protein_id="ACT67436.1" FT /translation="MAKRAADIVISTPASKVRRRLNFGSPYTSRVAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(628..984) FT /gene="AC5" FT CDS complement(628..984) FT /codon_start=1 FT /gene="AC5" FT /product="AC5" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:D2DJ41" FT /protein_id="ACT67437.1" FT /translation="MSTSHVKHQCILGVILVFSCFLLVVNNVVVNPNKLLDQSLLLTRI FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFIYRSSITNKEKHDTVS FT MVLGLDVLIHPYLS" FT gene complement(1047..1457) FT /gene="AC3" FT CDS complement(1047..1457) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /note="replication enhancer" FT /db_xref="GOA:D2DJ42" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2DJ42" FT /protein_id="ACT67438.1" FT /translation="MITDSRTGEYITVDRAESGVYTWEIRNPLYFKILKHDSRPFLTQH FT DIITIQIQFNHNLRKALGLHKCFLTFKIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISL FT NLVIKAVEHVLYNVINQTMYVDQYSDIKFKLY" FT gene complement(1144..1596) FT /gene="AC2" FT CDS complement(1144..1596) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /note="transcription activator" FT /db_xref="GOA:D2DJ43" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D2DJ43" FT /protein_id="ACT67439.1" FT /translation="MQSSSHSRNHSIPVAKTSLPQKKKKSIRRRRVDLPCGCSYYTSIN FT CHDHGFTHRGIHHCGSSREWRIYLGNSKSPVFQNFETRQPALPNTARHNNDSNTVQPQP FT AESPGTSQVFSNFQNLDDLTPSDWSFLKGIQNPSPQVSQQSRCNLT" FT gene complement(1499..2584) FT /gene="AC1" FT CDS complement(1499..2584) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /note="replicase" FT /db_xref="GOA:D2DJ44" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2DJ44" FT /protein_id="ACT67440.1" FT /translation="MAPPSRFRINAKNYFLTYPKCSLTKEEALSQLQTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKAYI FT DKDGDVVEWGVFQIDGRSARGGQKTANDAYAQAINTGNKDDAFKVLKEFAPKDYVLQFH FT NLITNLDRIFQPRSEIYVSPFSILSFDRVPPELVDWVSSNVVCAAARPFRPISVVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPPEEEEEHSEEAS" FT gene complement(2134..2427) FT /gene="AC4" FT CDS complement(2134..2427) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2DJ45" FT /protein_id="ACT67441.1" FT /translation="MGHRISMFLSNSRENSNARITDSSTWCPQVGQHISIRTFRELNQH FT RTSKRTSTKTETSLSGVFSRSMDDLLVVVRKQQTMHMLRRLTQEIKMMPLKY" XX SQ Sequence 2740 BP; 742 A; 563 C; 629 G; 806 T; 0 other; accggatggc cgcgcaaatt tttagtggtg ggtccagaac gcacgacgat gcagactcaa 60 agcttagata atgcatgtgg caataaatag acttgctcac taagtttcaa ttcacaaaca 120 tgtgggatcc actattaaac gaatttccgg atacggttca cgggtttcgt tgtatgctat 180 ctgtaaaata tttgcaactt ttgtcgcaga attattcccc agacacagtc ggctacgatc 240 taatacgaga tctaattctt gttctccgag caaagaacta tggcgaagcg agcagcagat 300 atcgtcattt ctacgcccgc gtcgaaagta cgtcggcgtc tgaacttcgg cagcccatac 360 accagccgtg ttgctgcgcc cattgtccgc gtcacaaaac aacaggcatg gacaaacagg 420 cctatgaaca ggaagcccag aatgtaccgg atgtacagaa gtccggatgt tccaagggga 480 tgtgagggtc cctgtaaggt acaatccttt gagtctagac acgatgttgt tcatattggt 540 aaggtaatgt gtatttctga tgttacgcgt ggagtcggtt tgacccatcg cgtagggaag 600 cgattttgtg tgaaatccgt ctatgtgtta ggaaagatat ggatggatga gaacatcaag 660 accaagaacc atactaacag tgtcatgttt ttccttgttc gtgatcgacg accggtagat 720 aaaccacaag attttggtga agtatttaat atgtttgata acgagcccag tacggcgacc 780 gtgaagaaca tgcataggga tcggtaccag gtgttgagga aatggcatgc aaccgttact 840 ggtggacaat atgcgagtaa ggagcaggct ttggtcaaga agtttgttag ggttaacaac 900 tacgttgttt acaaccagca ggaagcagga aaatacgaga atcacaccga gaatgcattg 960 atgctttaca tggcttgtac tcatgctagc aacccagtgt atgctacttt gaagatccgg 1020 atctattttt atgattcggt aacaaattaa taaagtttga attttatatc tgaatattgg 1080 tctacataca ttgtttgatt aattacattg tacaatacat gttcaacggc tttaataact 1140 aaattaagtg agattacacc tagattgttg agatacttga ggacttgggt tttgaatacc 1200 cttaagaaaa gaccagtcgg agggtgtaag gtcgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaact gtatttgaat cgttattatg 1320 tcgtgctgtg ttaggaaggg ccggctgtcg tgtttcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatcca cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tgtgtaatac gaacaaccac acggtagatc 1500 aactcgcctc ctccgaatgc tcttcttctt cttctggggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcctcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcattttt ttcttcatcc aggtattcct tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgaccggctt tccgtacttc gtattgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaaatgctt tagatagtgg ggatcgacgt 1800 catcaatgac gttgtaccag gcatcattgc tatacacctt tgggctcaga tctagatgtc 1860 cacacaagta attgtgtggt cctaagcaac gagcccacat tgttttgccc gtcctactat 1920 ccccctctat gactacactt attggtctaa aaggccgcgc agcggcacac accacattcg 1980 acgagaccca atcgacgagt tctggcggaa ctctgtcgaa ggataaaatt gaaaatggag 2040 aaacataaat ctcggaacga ggttgaaaaa tgcgatctaa atttgtaatt aaattgtgaa 2100 actgcagaac ataatccttt ggtgcaaatt cctttaatac tttaaaggca tcatctttat 2160 ttcctgtgtt aatcgcctga gcatatgcat cgtttgctgt tttctgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccact caacgacgtc tccgtctttg tcgatgtacg 2280 ctttgacgtc cgatgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggacac caagtcgaag aatctgttat tcttgcattg gaattttccc tcgaattgga 2400 taagaacatg gatatgcggt gacccatcct catgaagctc tcgacagatc ttgatgaatt 2460 tcttcgaggt gggggtttct agggtttgca attgggaaag tgcctcttcc tttgtaagag 2520 agcactttgg atatgtgagg aaatagtttt tcgcatttat tctaaaacga cttggcggag 2580 ccataaaaca tgttgtttcg atccggtgtc tctcaacttt ctctgtgtaa ttggtatctg 2640 gagtcccata tataggtaag acaccaaatg gcatatgtgt aattttgaaa agaaaattac 2700 tttaattcaa attccctaaa gcggccattc gtataatatt 2740 //