ID FJ795768; SV 1; linear; genomic RNA; STD; VRL; 4223 BP. XX AC FJ795768; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate MBL86 polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4223 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4223 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 19c2d1c0f6ae34d0308852c01192030a. XX FH Key Location/Qualifiers FH FT source 1..4223 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea acuminata" FT /isolate="MBL86" FT /mol_type="genomic RNA" FT /country="Uganda:Mbale" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7L0" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U7L0" FT /protein_id="ACY74500.1" FT /translation="GATSCVLHQTKDALSKHLRLKGVWNKSVITQDLFILAGVFAGGLW FT MIMAGLKESFDQTVLHQGKEKRQMQKLKFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGAVIDDSPYTDILLVQEKIGE FT ARLNAIKEDELSREKVAQNPGIHAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTLNDVPVNPEEASLVGHESKSLFRGLRDYNPIASVICHLMNEADG FT RTSDCFGIGYGGLIITNRHLFKRNNGTLTIRSRHGEFVIKNTTQLGMKPCADRDILIIR FT MPKDIPPFPQRLKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEVDYLKTPEAMDWIKKWS FT YNPDEICWGTLELKTGQPVAPFKVSKLIANLRSIQVYAQTRSDRWVQDRLYGNLKAVGQ FT CPAQLVTKHVVKGKCMLFDLYLQQDQSEREYFKPLMGAYGKSKLNKEAYNKDLFKYATQ FT IQAGDVQVDTFELAERSVISMLTSKGFEKCNYITDPEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHDVEDHLFHSCKRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDVGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESGFNKCCVFFANGDDLLLAMRPDTAHLLDKFGECFS FT ELGLNYDFSSRTNKKEDLWFMSHCGVRRDGIFIPKLEPERIVSILEWDRSHEPIHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLEQAPYNELARNGKAPYIAETALKALYTGVQPNA FT SELSAYTRVLKEMYDDSMLQENDLEVYHQSNERTEFKDAGADPPAPKPKNNPPPPTITE FT ITEPEDPKQAALKAARAKQPAVIPESYGRDTSKERESIVGTSSKGVRDKDVNVGTVGTF FT VVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDY FT GVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3055..3999 FT /product="coat protein; CP" XX SQ Sequence 4223 BP; 1367 A; 766 C; 981 G; 1109 T; 0 other; ggagccacct cttgtgtgct tcatcaaaca aaagatgcac tctcaaagca ccttcgtttg 60 aaaggagtgt ggaataaatc agtcatcaca caggatttgt tcattttagc aggggtattt 120 gctggtggtt tgtggatgat aatggcgggg ctaaaggaat cattcgatca aactgtgcta 180 caccaaggaa aggaaaagcg acaaatgcaa aagctgaagt ttaggaaagc acgagacaat 240 aaacttggat ttgaagtgca cgctgatgat ggaactatcg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaag gttactggga tgggatcaaa gaacagaaaa 360 tttataaaca tgtatgggtt tgatcccact gaatattcct ttgtccgatt tgttgacccg 420 ttaactgggg ctgtgataga tgattcccca tacacagata ttcttcttgt tcaggagaag 480 attggtgagg ctcgtttgaa tgctatcaaa gaagatgaac tttcaagaga gaaagttgca 540 caaaatccag gaattcatgc atactatatc aatgaaatca caaatgctgc actcaaagtt 600 gatcttacac cgcacaatcc actactcgca tgtgaaagac atagcactat tgccggtcat 660 cctgaatatg aaggagtttt gagacaaacc ggacccccaa ttaagatgac gcttaatgac 720 gtgccagtga atcctgaaga ggcaagttta gttgggcatg agagtaagtc actatttaga 780 ggcttaaggg attacaaccc aatagcaagt gttatatgtc acctaatgaa tgaagcggat 840 gggagaacaa gcgattgctt tggaatcgga tatggtggtc tcattataac aaataggcac 900 cttttcaaac gaaataatgg aacgttgaca ataagatctc gtcacggaga gtttgttatt 960 aagaatacaa ctcaacttgg aatgaagccc tgcgctgata gagacatact aatcattagg 1020 atgcctaagg atataccccc gttcccgcaa cgcctgaaat ttagggttcc aaaagaaaat 1080 gaaagaatct gcttggttgg atcaaatttt caggataaat caatcacgag cacgatttct 1140 gaaaccagtg taacgtgcca tgtgccaaac tcacattttt ggaagcactg gatcgataca 1200 aaagacggcc attgtggcct tcccttagta agcactactg atggtgcttt gttgggagtg 1260 catagtctat caaatttgac aaacactcag aacttctttg catcatttcc tgagaacttt 1320 gaagtggact atttgaaaac tcctgaggca atggattgga taaagaagtg gagttataat 1380 ccagatgaaa tttgttgggg aacactggaa ctgaaaacag gacaacccgt tgccccattc 1440 aaagtctcca aactaatcgc gaacctaaga agcatacaag tgtatgctca aaccaggtcg 1500 gataggtggg ttcaagatag actatatggc aatcttaaag cagttggtca atgtcccgca 1560 caattggtca ctaagcacgt tgtgaaagga aaatgcatgc tatttgacct atatttgcag 1620 caagatcaat ctgaaaggga gtatttcaag cctcttatgg gagcatacgg aaaaagtaag 1680 ctcaacaaag aagcgtataa taaggatttg tttaagtatg cgacacaaat tcaggcagga 1740 gatgtgcaag tggatacgtt cgaattggcg gaaagatctg tcatttccat gctcacgtca 1800 aaagggtttg aaaagtgcaa ctacatcaca gatccagagg aaattctgaa agcactgaat 1860 atgaaggctg cagtcggtgc gatgtacagt ggtaagaaga aagattactt tgaaggaatg 1920 agtgatcacg atgtagaaga ccatcttttc cacagttgca agcgtttgtt catgggacat 1980 aaaggtcttt ggaatggatc cttgaaagct gaattaagac ctatggaaaa agtggaactt 2040 aacaaaacaa gaaccttcac agcggctcct cttgacacgc tacttggtgg taaggtgtgt 2100 gtagacgatt ttaataacat gttttacaac caccatttaa aatgtccatg gacggtagga 2160 ataaccaaat tttaccaagg atgggatagg cttctcacat ctctacctga gggatgggtt 2220 tattgtgacg ctgatggctc acaatttgat agttctctct ctccatattt gattaactca 2280 gttcttaata taagaagaga gtttatggaa gattgggatg ttggtgatca aatgcttcgg 2340 aatttataca cagaaatagt gtacacacca atactgacac cagatggaac catagtgaag 2400 aagttcaaag gtaacaacag tggacagcca tccactgtgg ttgataatac acttatggtt 2460 gtgttagcag ttcactacac actgctgaaa ttaggaatcc aagaaagcgg gtttaataaa 2520 tgctgtgtct ttttcgcaaa tggtgatgat ttattgttgg caatgaggcc agatacagcc 2580 catttactgg ataagtttgg tgaatgtttc tctgaattag gactcaatta tgacttttca 2640 tcacgaacaa ataagaagga agatctatgg tttatgtcac actgtggtgt gagacgtgat 2700 ggaatattta ttccgaagtt ggagcctgag aggattgttt caattcttga atgggatcgt 2760 tcacatgagc cgattcatcg actggaagca atatgtgccg cgatggtgga atcatggggt 2820 tatgatgaac ttcttcatca tattaggaaa ttctatgcat gggttttgga gcaagcccca 2880 tataatgaac tagcacgaaa tgggaaagca ccatacatag ctgaaactgc actcaaagca 2940 ctctatacgg gtgttcaacc taatgcttct gaattgagtg cgtacacaag agtgctcaaa 3000 gaaatgtatg atgacagtat gctccaagag aatgacttgg aagtatatca tcaatctaat 3060 gagcgcactg aatttaaaga tgcaggagcg gaccctccag cccctaagcc taagaacaat 3120 cctccaccac ccacaataac tgaaattact gaaccagagg acccaaagca ggcagcattg 3180 aaagctgcac gagcaaaaca acctgcagtc attccagaat catatggacg agatacaagt 3240 aaagaaaggg agtcaatagt ggggacatca tcaaagggtg tgagggataa agatgtgaat 3300 gttggcactg ttggtacatt tgttgtgcca cgtgtcaaaa tgaatgcgaa caagaaaagg 3360 caaccaatgg tcaatggaag ggccattata aatttccagc acttgtcaac gtatgaacca 3420 gagcaatttg aggttgcaaa cacccgatcg actcaagaac agttccaagc atggtatgaa 3480 ggagttaaag gggattatgg tgttgacgac acaggaatgg ggatcttatt gaatggatta 3540 atggtttggt gcattgaaaa tggcacatcc ccaaatataa atggtgtgtg gacaatgatg 3600 gatggtgatg agcaagtgac atatccaatc aaaccattac tggaccatgc ggtgcctact 3660 tttaggcaga ttatgacgca cttcagtgac gttgctgaag cttacataga aatgcgaaac 3720 cgtacaaagg cgtacatgcc aagatatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ttacgagctg cattcaacta cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaggc agccgcactt aagaatgcgc gaaatcggtt gtttggtttg 3900 gacggaaacg tctccacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggaatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatactt atgttatctt tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga 4080 aggagatggt tgaatgcata acatggtggg attatatctc ggttattgca tttgagaagt 4140 cacctttcta ttacgtatca taagggactc ttaaaagtga agagtacctc gtaagaaaag 4200 cctttttggt tcgtgatcga gcc 4223 //