ID FJ795772; SV 1; linear; genomic RNA; STD; VRL; 4223 BP. XX AC FJ795772; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate BUSH13 polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4223 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4223 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (25-FEB-2009) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 3ec4f1d38f34a7ae9d292bd4d76015e1. XX FH Key Location/Qualifiers FH FT source 1..4223 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea cairica" FT /isolate="BUSH13" FT /mol_type="genomic RNA" FT /country="Uganda:Bushenyi" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U7L4" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U7L4" FT /protein_id="ACY74504.1" FT /translation="GATPCVLHQTKDSLSKHLGLKGVWNKSVITQDLLILAGVFAGGIW FT MIMAGVKDSFDQTVLHQGKEKRQMQKLKFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGAVIDDSPYTDILLVQERIGE FT ARLNAIKEDELSREKVAQNPGIHAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTLNDVPVNPEEASLVGHESKSLFRGLRDYNPIASVICHLVNEADG FT RISDCFGIGYGGLIVTNRHLFKRNNGTLTIRSRHGEFVIKNTTQLGMKPCADRDILIIR FT MPKDIPPFPQRLKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEVDYLKTPEAMDWIKKWS FT YNPDEICWGTLELKTGQPVAPFKVSKLITDLEGIQVYAQTRSDRWVQDRLYGNLKAVGQ FT CPAQLVTKHIVKGKCMLFDLYLQQDQSEREYFKPLMGAYGKSRLNKEAYNKDLFKYATQ FT IQAGDVQVDTFELAERSVISMLTSKGFEKCNYITDPEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHDVEDHLFHSCKRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDVGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANGDDLLLAMRPDTAHLLDKFGECFS FT ELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKLEPERIVSILEWDRSHEPIHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARNGKAPYIAETALKALYTGIQPSI FT SELSVYTRVLNEMYDDSMLQENELEVYHQSSEKTEFKDAGANPPSPKSKINPPPPTITE FT IVDPEDPKQAALKAARAKQPATIPESYGRDTSKEKESIVGTSSKGVRDKDVNVGTVGTF FT VVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQYEVANTRSTQEQFQAWYEGVKGDY FT GVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein; CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body; NIb" FT mat_peptide 3055..3999 FT /product="coat protein; CP" XX SQ Sequence 4223 BP; 1362 A; 761 C; 977 G; 1123 T; 0 other; ggagccaccc cttgtgtgct ccatcaaact aaggactctc tctcaaaaca tcttggtctt 60 aagggagtat ggaacaagtc agttattaca caggacctac ttattctcgc aggagttttt 120 gctggtggaa tctggatgat aatggcggga gtgaaggatt catttgatca aactgtgcta 180 catcaaggaa aagaaaagag gcaaatgcaa aagctgaaat tcagaaaggc acgagataat 240 aaacttggat tcgaagtgca tgctgatgat ggaactatcg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaag gttactggaa tgggatcgaa gaatagaaaa 360 tttataaaca tgtacggatt tgatcccact gaatattcct ttgtccgatt tgtcgaccca 420 ttgactggag ctgtaataga tgattcccca tatacagata ttctccttgt tcaggagagg 480 attggtgagg ctcgtttgaa tgccatcaaa gaagatgaac tttcaagaga aaaagttgca 540 caaaatccag gaattcatgc atattatatc aatgaaatca caaatgctgc acttaaagtt 600 gatcttacac cgcacaatcc attacttgca tgtgaaagac atagcactat tgccggtcat 660 cctgaatatg aaggagtttt gagacaaacc ggacccccaa ttaagatgac acttaatgac 720 gtgccagtga atcctgaaga ggcaagtttg gttgggcacg aaagtaaatc attatttaga 780 ggcttaaggg attataatcc aatagctagc gtcatatgtc atctcgtgaa tgaggcagat 840 gggagaataa gtgactgttt cgggattgga tatggcggtc tcattgtcac caataggcat 900 ctgtttaaac gaaacaatgg gacattgaca ataagatctc gtcacggaga gtttgttatt 960 aagaacacaa ctcaacttgg gatgaagccc tgtgctgata gagacatact aatcattagg 1020 atgcctaagg atataccccc gttcccacaa cgcctgaaat ttagggttcc aaaagaaaat 1080 gaaagaatct gtttggttgg atcaaatttt caggataaat caatcacgag cacgatttct 1140 gaaaccagcg taacgtgcca tgtgccaaac tcgcattttt ggaagcactg gatcgataca 1200 aaagatggac attgtggtct tcccttagta agcactactg atggtgctct gttgggagtg 1260 catagcctat caaatttgac gaacactcag aacttctttg catcatttcc tgagaacttt 1320 gaagtggact atttgaaaac tcctgaggca atggattgga taaagaagtg gagttataat 1380 ccagatgaaa tttgttgggg aacgctggaa ctgaagacag gacaacccgt tgccccattc 1440 aaagtgtcca agttaatcac ggacttagaa ggcatacaag tgtatgctca aacaaggtcg 1500 gatagatggg ttcaagatag actatatggc aatcttaaag cagttggtca atgtcctgca 1560 caattggtta ccaagcacat tgtgaaggga aaatgcatgc tatttgatct atatttgcag 1620 caagatcaat ctgaaaggga gtatttcaag cctctcatgg gagcatacgg gaaaagtagg 1680 ctcaacaaag aggcgtataa taaggatttg ttcaaatatg caacgcaaat tcaggcagga 1740 gatgtgcaag tggatacatt cgaattggcg gaaagatctg tcatttctat gctcacgtca 1800 aaaggatttg aaaagtgcaa ctacatcaca gatccagagg aaattctgaa agcactgaac 1860 atgaaggctg cagtcggtgc gatgtacagt ggaaagaaga aggattactt tgaaggaatg 1920 agtgatcacg atgtggaaga ccatcttttt catagttgca agcgtttgtt catgggacac 1980 aaaggtcttt ggaatggatc cttgaaagct gagttgagac ctatggaaaa agtggaactt 2040 aacaaaacaa gaaccttcac agcggctcct cttgacacgc tgcttggcgg taaggtgtgt 2100 gtagacgatt tcaataacat gttttacaac catcatttaa aatgtccatg gacagtagga 2160 ataaccaaat tttaccaagg atgggatagg cttctcacat ctctacctga aggatgggtt 2220 tattgtgacg ctgatggctc acaatttgat agttctctct ctccatattt gatcaattca 2280 gttcttaata taagaagaga atttatggaa gattgggatg ttggtgatca aatgcttcgg 2340 aatttataca cagaaatagt gtacacacca atactgacac cagacggaac catagtgaag 2400 aagttcaaag gtaacaacag tggacaacca tctactgtgg ttgataatac acttatggtt 2460 gtgttagcag ttcactacac attgctgaaa ctaggaatcc aagaaagcga gtttgataaa 2520 tgctgtgtct ttttcgcaaa tggtgatgat ttattattgg caatgaggcc ggatacagcc 2580 catttactgg ataagtttgg cgaatgtttt tctgaattag gactcaatta tgacttttca 2640 tcacgaacaa ataagaagga agatctatgg tttatgtcac actgtggcgt gaaacgtgat 2700 ggaatattta ttccgaagtt ggagcctgaa aggattgttt caattcttga atgggatcgt 2760 tcacacgagc caattcatcg actggaagca atatgtgccg cgatggtgga atcatggggt 2820 tatgatgaac ttcttcatca tattaggaaa ttctatgcat gggttttgga ccaagcccca 2880 tacaacgaac tagcacgaaa tgggaaagca ccatacatag ctgaaactgc actcaaagca 2940 ctctatactg gtattcaacc tagtatttct gaactgagtg tgtatacaag agtgcttaat 3000 gaaatgtacg atgatagtat gcttcaagag aatgagttgg aagtatatca tcaatctagt 3060 gagaagactg aatttaaaga tgctggagcc aaccctccat cccctaagtc taagatcaat 3120 cctccaccac ccacaataac tgagatcgtt gatccggagg acccgaagca agcagcttta 3180 aaagctgcac gagcaaagca acccgcaact attccagaat catatgggcg tgatacgagc 3240 aaagaaaagg aatcaatagt aggaacatca tcaaagggtg tgagagataa agacgtgaac 3300 gttggcacag ttggtacatt tgttgtacca cgtgttaaga tgaatgcaaa caagaagaga 3360 caaccaatgg tcaatggaag ggccattata aatttccaac acttgtcaac atatgaacca 3420 gagcagtatg aagttgcgaa cacccgttcg actcaagagc aattccaagc atggtatgag 3480 ggagttaaag gggattacgg tgttgacgac acaggaatgg ggatcttatt gaatggacta 3540 atggtttggt gcattgaaaa tggcacatcc ccaaatataa atggtgtgtg gacaatgatg 3600 gacggtgatg agcaagtgac atatccaatt aaaccattat tggatcatgc agtgcctact 3660 tttaggcaga ttatgacgca cttcagtgac gttgctgaag cttatataga gatgcgaaac 3720 cgtacaaagg cgtacatgcc aagatatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ttacgagctg cattcaacta cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaggc agccgcactt aagaatgcgc gaaatcggtt gtttggtttg 3900 gacggaaacg tctccacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggcatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatactt atgttatttt tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga 4080 aggagatggt tggatgcata acatggtggg attatatctc ggttattgca tttgagaagt 4140 cacctttcta ttacgtatca taagggactc ttaaaagtga ggagtacctc gtaagaaaag 4200 cctttttggt tcgtgatcga gcc 4223 //