ID FN400773; SV 1; linear; genomic RNA; STD; VRL; 2981 BP. XX AC FN400773; XX DT 02-JUN-2010 (Rel. 105, Created) DT 02-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Impatiens necrotic spot virus segment S, genomic RNA, complete sequence, DE isolate YSMi-SH XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2981 RA Li F.; RT ; RL Submitted (31-MAY-2009) to the INSDC. RL Li F., Plant Pathology, Yunnan Agriculture University, CHINA. XX RN [2] RA Li F.; RT "Complete nucleotide sequence of S RNA of Impatiens necrotic spot virus RT isolated from Dendrobium sp."; RL Unpublished. XX DR MD5; bba08b462da51e135506eb5b70cbd7f6. XX FH Key Location/Qualifiers FH FT source 1..2981 FT /organism="Impatiens necrotic spot virus" FT /segment="S" FT /host="Dendrobium sp." FT /isolate="YSMi-SH" FT /mol_type="genomic RNA" FT /country="China:Yunnan, Songming" FT /db_xref="taxon:11612" FT CDS 84..1433 FT /gene="NSs" FT /product="nonstructural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:D7F819" FT /protein_id="CAZ63991.1" FT /translation="MSSAMYETIIKSKSSIWGTTSSGKAVVDSYWIHDQSSGKKLVEAQ FT LYSDSRSKTSFCYTGKVGFLPTEEKEIISENVFVPIFDDIDLNFSFSGDVVEILVRSNT FT TNTNGVKHQGHLKVLSSQLLRMFEEQIAVPEITSRFGLKESDIFPPNNFIEAANKGSLS FT CVKEVLFDVKYSNNQSMGKVSVLSPTRSVHEWLYTLKPVFNQSQTNNRTVNTLAVKSLA FT MSATSDLMSDTHSFVRLNNNKPFKISLWMRIPKIMKSNTYSRFFTLSDESSPKEYYISI FT QCLPNHNNVETALNITLISKPLLESTPSSSDHKIEMNFSDLKEPYNVIHDMSYPQRIVH FT SLLEIHTELAQTICDSVQQDIIVFTINEPDLKPKKFELGKKTLNYSEDGYGRKYFLSQT FT LKSLPRNSQTMSYLDSIQMPDWKFDYAAGEIKISPRSEDVLKAISKLDLN" FT CDS complement(2044..2832) FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q76D17" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q76D17" FT /protein_id="CAZ63992.1" FT /translation="MNKAKITKENIVKLLTQSDSLEFEETQNEGSFNFTDFFTNNREKI FT QNMTTASCLSFLKNRQSIMRVIKSADFTFGSVTIKKTRNNSERVGVNDMTFRRLDAMVR FT VHLVGMIKDNGSALTEAINSLPSHPLIASYGLATTDLKSCVLGVLLGGSLPLIASVLNF FT EIASLVLAIYQDAKHVELGIDMSKFSTKEAVGKVCTVLKSKGYSMNSVEIGKAKQYADI FT LKACSPKAKGLAAMDHYKEGLTSIYSMFNATIDFGKNDSI" XX SQ Sequence 2981 BP; 980 A; 528 C; 450 G; 1023 T; 0 other; caagaagagc aattgtgtca cgaacaacca agctacaaca gaacttacaa tattgtcaat 60 tacattacta cttccatttt aacatgtcta gtgcaatgta tgaaacaatt atcaaatcga 120 agtcctcaat ctggggaaca acatcttcgg gtaaagcagt agtagatagt tattggattc 180 atgaccaatc ttccggaaag aagttggtcg aagctcaact ctattctgac tccaggagca 240 agaccagttt ctgttacact ggtaaagttg gctttctccc aacagaagaa aaagaaatta 300 taagtgagaa tgtttttgtg cctatttttg atgacattga tctgaatttc tccttttcag 360 gagatgttgt cgaaattctg gtcagatcta acacaacaaa cacaaacggt gttaagcatc 420 aaggccatct caaagtgtta tcctctcagt tgctcagaat gtttgaagag caaatagcag 480 tgcctgaaat tacttcaaga ttcggtctga aagaatctga catcttccct ccaaataatt 540 tcattgaagc tgcaaataaa ggatcattgt cttgtgtcaa agaagttctt tttgatgtca 600 agtattcaaa caaccaatcc atgggcaaag tcagtgttct ttctcctacc agaagtgttc 660 atgaatggct gtacacactt aagcctgttt ttaaccaatc ccagaccaac aacaggacag 720 taaacacttt ggctgtaaaa tcactggcaa tgtctgcaac ttctgactta atgtcagata 780 ctcattcatt tgtcaggctc aataataaca agccctttaa aatcagcctt tggatgcgca 840 tccctaaaat aatgaaatca aacacataca gccgcttctt caccctgtct gatgaatctt 900 ctcctaaaga gtattatata agcattcaat gtcttccaaa tcacaacaat gttgaaacag 960 cattgaatat aactttgatc agcaaacctc ttcttgaatc gactccttct agcagtgatc 1020 ataaaattga gatgaatttt tctgacctaa aagaacctta caatgttatc catgatatgt 1080 catatcctca aagaattgtt cattcacttc ttgaaatcca cacagaactt gctcaaacta 1140 tctgtgacag tgttcagcaa gacataattg tcttcactat aaatgagcca gatctaaagc 1200 caaaaaagtt tgagctaggg aaaaagactt taaattattc agaagatggt tatgggagaa 1260 aatatttcct ttctcagacc ttgaaaagtc ttccaagaaa ctcacaaaca atgtcttatt 1320 tggatagcat ccagatgccc gattggaaat ttgactatgc tgcaggtgaa ataaaaattt 1380 ctcctaggtc agaggatgtt ttgaaagcta tttctaaatt agatttaaat taaacttggt 1440 taaacttgtt cctaagtaaa gtttgtttac atgcatttag atcagatcaa acaaatctaa 1500 taacagataa accaaaaaca atcatatgaa ataaataaat aaacataaaa tatataaaaa 1560 ttacaaaaaa tcataaaata ataaaaaaac caaaaaagat gccttcgggc acaatttggt 1620 tgcttttaaa taaatgcttt aaaatgaatg tattagtaaa ttataaactt taaatccaat 1680 ctactcacga atttggccaa aatttgtttt tgtttttttg tttttttttt tgttttttgt 1740 ttttgttttg ttttatctgt ttttatttgt ttttgttttt ttgtttttat ttttatttat 1800 atatatatat atatatattt ttagttgttt ttattgtttt tattattttt tgtagctttt 1860 ttattgttta tttcacacgc aaaccctttt tagtttatat attaaaacac acattaaact 1920 tatttcaaat aatttataaa agcacactta atacactcaa acaataatta attattttta 1980 tttttatttt atttatttaa atgcatttaa cacaacacaa agcaaaccaa gcttaaatct 2040 cttttaaata gagtcatttt tcccaaaatc aatagtagca ttaaacatgc tgtaaatgga 2100 ggtaagccct tctttgtagt ggtccattgc agcaagtcct ttagcttttg gactacaagc 2160 ctttagtata tctgcatatt gttttgcctt accaatttca acagagttca tgctatatcc 2220 tttgcttttt agaactgtgc acactttccc aactgcctct ttagtgctaa acttagacat 2280 gtcaattcca agctcaacat gtttagcatc ttgataaata gccagaacta gtgaagctat 2340 ttcaaaattc agtacagatg ctatcagagg aagacttcct cctaagagaa cacccaagac 2400 acaagatttc aaatctgtgg ttgcaagacc atatgaggca atcagagggt gacttggaag 2460 gctgtttata gcttcagtca gagcagatcc attgtccttt atcattccaa caagatgaac 2520 tctaaccatt gcatcaagtc ttcggaaagt catatcattg actccaactc tttctgaatt 2580 gtttctagtt ttcttaattg tgactgatcc aaaagtgaag tcagcactct taatgactct 2640 cattatagat tgcctattct tgaggaagga taggcaagat gcagtagtca tgttctgaat 2700 cttttcacgg ttgttggtaa agaagtcagt gaaattgaaa gatccttcat tttgagtttc 2760 ctcaaattct aaggaatcag attgagtcaa aagcttgact atgttctcct tggtaatctt 2820 tgctttgttc atcttgatct gctgactcta ctaactttaa aacttaaagt gttcaaatta 2880 ctaaatagta cttgcggata aagtagtatt tggtaaaatt tgtaattttt cagtttctag 2940 ctttggatta tatgatgtta tattcgtgac acaattgctc t 2981 //