ID FN563983; SV 1; linear; genomic RNA; STD; VRL; 4500 BP. XX AC FN563983; XX DT 18-NOV-2010 (Rel. 106, Created) DT 18-NOV-2010 (Rel. 106, Last updated, Version 1) XX DE Rice black-streaked dwarf virus 2 segment 1, isolate GD, complete segment, DE genomic RNA XX KW complete viral segment, complete genome. XX OS Rice black-streaked dwarf virus 2 OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-4500 RA Adams M.J.; RT ; RL Submitted (04-NOV-2009) to the INSDC. RL Adams M.J., Rothamsted Research, Department of Plant Pathology and RL Microbiology, Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX AGRICOLA; IND44448932. RA Wang Q., Yang J., Zhou G.H., Zhang H.M., Chen J.P., Adams M.J.; RT "The Complete Genome Sequence of Two Isolates of Southern rice RT black-streaked dwarf virus, a New Member of the Genus Fijivirus"; RL J. Phytopathol. 158(11-1):733-737(2010). XX DR MD5; b558d31b2312ab8538f0fe738649312c. DR EuropePMC; PMC3766826; 24058362. XX FH Key Location/Qualifiers FH FT source 1..4500 FT /organism="Rice black-streaked dwarf virus 2" FT /segment="1" FT /isolate="GD" FT /mol_type="genomic RNA" FT /country="China:Guangdong, Yangxi county" FT /collection_date="Oct-2005" FT /db_xref="taxon:566568" FT CDS 37..4431 FT /product="P1" FT /function="RNA-dependent RNA polymerase" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:E4WKV7" FT /protein_id="CBH31244.1" FT /translation="MVERKFSRSAEICLKKFNSIQKFRQNKQQQKTNRDRTISQKEKKI FT KDRAPPPSKKEDIPTISTPISIESQSNLDEQRTSYIHLLHQKDSILDAIIEVAENIRNV FT FIGEVPLTKEIIKNRLDDIWTVLNNASDMILKLFESDNGILNECVIPNDVIQKDIYSIL FT HPSEIFDYNGFGIDEVNNLAISPKIRYLPNWNIQIFRSTIDLLKNDNSPLKRVKLAHDY FT GLISNNLKRKLLIGVDRMFNKLSIQHRFGSFESQIFSCFLMKQLLTEEQCYVNLPNCVL FT KSKFQKRGIDTVCWQYLRQIILHYNGFPFYHHTHSARFGVLHSTKISIHTDLPVSCVLP FT SVLHGLLNGIVSELLCDLNSETALIYAKHLMFCSLQSTYQRQLDFKDSFRSWPKLCYDS FT IGYVLAVLYSSDMKPLEQRIEHIDSEFWMDEKEKEILETSVSQLPDYVKKFVSSSIAHC FT TDLGNIVKSRMPLNNNISLSRELTNDEVTSVRLLASKNTEFFRWLTMTSTIISKFGIYN FT KTSLLLEYKKTVGTKQDVMVSKPECKITIVTKQPMNIPLINDWSKVPILNEMSELFDQN FT WKSDLIKEFDHIDDFKKRFVTFLTNKSGGQKSEEPTFSKELKGISNARVIGFALNRNDY FT HDKVKFIKMLVGYGKCAIRFQIDRRARVIVIVPNAIQSSELLLLLGFNVLKTNKKHNDK FT IAVGKQIGNLLDARVQMCNTGDVSSVKNSGDMKGMDAHTIPNLTLFLRNKMIEVLFELD FT PSKSCSNFFFSEDKEYTLKEKHPKFEEIYNRKLRGVVIHAAKCLFYMFSMNMYLDDHFF FT ADSQTVSDQTFQTGFFATSAQHTLFLSLFLLNLERKFFAKLDNKMISVMHSVMGDDVLE FT VIKNGVKFPDKVRSWLSLRKNDLAKLNYEEEFSLSRMYGVFLQQPALLGVYVGYPSRMS FT LFCDERSDTTKRHTLDMIKIVMDVISAKAQRSYGLDNGLGIGYSIWSCHRSSRYIYSDF FT YKSKVSQLLEMDKTLLFNFIVSHDETEKSIRFIYPFVTVMCSPISWPMLTFVMNDIFER FT NKFITYKSKAFTSLNRDGAYMLINQMFFTSNEQHMFQFVDYVKHQSKIVELKLNSNFLN FT WEARDHSGFTFGEHLLRFKRLRHLTDSRKNELGLGDIEVMVHNLNKYLDGNQVLLSFNS FT ISVLKAHKIVVPYGLMYANHNRSKIDQSLTVRTESLEERVYLDSIFLKHMLDYKTVPKD FT LEVLKTHALCSVRLRIYGDFDYACEKDGVIEPSSDAQFNIILPFLPGYHLNSGYPKLFL FT YSTLPTVHDRDIWGTLGEITGSLGASFDVDAAIEFGAHVFNINPSLVDAAGTAIGIPQG FT LLNHYKNLVNAFVTNNFNLKYHSIFLNVKYFGLNGSLKHFSTFGDYSSRLVRFDLIHKL FT DRYHNVFVRDFIFAYIHELNGRRVYLDYSLHSLLLVMSRGSIKYFTSHLSQLFNPMLTL FT EFD" XX SQ Sequence 4500 BP; 1469 A; 664 C; 784 G; 1583 T; 0 other; aagttttttt cgccgaccta cgtatctcat agacaaatgg tggaacgaaa gttcagtaga 60 tctgcagaaa tttgcttaaa aaaattcaac tcaatccaaa aatttagaca aaacaagcaa 120 cagcaaaaaa ccaacagaga ccgaacaatt tctcaaaaag aaaagaaaat aaaggacaga 180 gcccctcccc cttcaaagaa agaagacatt cccacaattt ctacccctat ttcaattgaa 240 tctcaatcaa atttggatga acaaagaaca tcttacattc atcttttaca tcaaaaagat 300 tccattttag acgcaattat tgaagttgct gaaaacattc gaaacgtttt tattggtgaa 360 gtgcctttaa ccaaagaaat cattaaaaat cgactagatg acatttggac agtgttaaat 420 aatgcgagtg atatgattct caaattattt gaatctgata atggtatttt gaatgaatgt 480 gttatcccga atgacgttat acaaaaagat atttattcca ttttgcatcc ctctgaaatt 540 tttgattata atggttttgg cattgatgaa gttaataact tagcgattag tccaaagatt 600 agatatttac ctaattggaa cattcagata tttagaagta ctattgatct tttgaaaaac 660 gataattctc ctttgaaacg agtcaaattg gctcatgatt atggtttgat tagtaataac 720 ttaaaacgta aattattaat tggtgttgat agaatgttta ataaattaag tattcaacat 780 agatttggta gttttgaaag tcaaatattc agttgttttc ttatgaaaca attgctaaca 840 gaagaacagt gttacgtcaa tcttccaaat tgcgttttaa aatcaaaatt tcaaaaaaga 900 ggaattgaca ctgtatgctg gcaatatttg cgacaaatca tccttcatta caatggtttt 960 cctttttatc atcacactca tagtgcaaga tttggtgtgc ttcacagtac aaaaatttct 1020 attcataccg atttaccagt ttcttgtgta cttccaagtg ttttacatgg attgttaaac 1080 ggcatagttt cagaattatt atgtgatttg aactcagaga cagctttaat ttatgccaaa 1140 catttgatgt tttgctctct acaatcaact tatcaacgtc aactcgattt taaagatagt 1200 tttcgttctt ggcctaaatt gtgttatgat agtattggtt atgtgttagc tgtattatac 1260 tcttcagaca tgaaaccttt ggaacaaaga attgaacata ttgattcaga attttggatg 1320 gatgaaaaag agaaagaaat tttagaaacg agtgtttctc aattaccgga ttacgttaaa 1380 aaattcgttt cttcttctat tgcgcattgt actgaccttg gtaacattgt taaatcaaga 1440 atgcctttaa ataacaacat ttctttatcc agagagctaa ctaatgatga agtaacttct 1500 gtacgtcttt tagcaagtaa aaatactgaa ttttttaggt ggttgaccat gaccagcact 1560 attatttcta aatttgggat atataacaaa acttctctat tgctcgaata caaaaaaaca 1620 gttggaacaa aacaagacgt tatggtgtca aaacctgagt gcaaaatcac cattgttaca 1680 aaacaaccta tgaatattcc attaattaat gattggtcta aagttcctat actaaatgag 1740 atgtctgaat tgtttgatca aaattggaag tctgatttga ttaaagaatt tgaccatatt 1800 gacgatttca aaaaaagatt tgtgactttt ctaactaata aatcaggtgg acagaaaagt 1860 gaggaaccta ctttctcaaa agaattaaaa ggcatttcta acgctagagt gattggtttt 1920 gctctcaata ggaatgatta tcatgacaaa gtaaaattta taaaaatgtt agtgggttat 1980 ggtaaatgtg ctattcgatt tcaaattgat cgtcgtgcta gggtgattgt cattgtacca 2040 aatgcaattc aatcgagtga attattgtta cttcttggtt ttaacgtttt aaaaactaac 2100 aaaaaacata atgataagat cgctgttgga aaacaaattg gtaatttatt agacgcaaga 2160 gttcaaatgt gtaatactgg agatgtcagt tccgttaaaa attctggaga catgaaaggc 2220 atggatgccc atactattcc taaccttaca ttatttttaa gaaataaaat gatcgaagtg 2280 ctttttgaat tagatcctag caaaagttgt tctaatttct tttttagtga agataaagaa 2340 tatactttaa aagagaagca tccaaaattt gaggaaattt ataaccgtaa attaagagga 2400 gttgttatcc atgccgctaa atgcttattc tacatgttct ccatgaatat gtacttagat 2460 gatcatttct ttgctgatag tcaaactgta tcagaccaaa cttttcaaac cggctttttt 2520 gcaacatcag ctcaacacac tttgttttta agtttgtttt tattaaattt ggaacgtaaa 2580 ttctttgcca agctagacaa taaaatgata tctgttatgc attctgttat gggagatgat 2640 gttttagagg ttatcaagaa tggagtgaaa tttcctgaca aggtaagaag ttggttgtct 2700 cttaggaaga atgatttagc aaaattaaat tacgaggaag aattctcgtt atctagaatg 2760 tatggagtct ttcttcagca acctgcttta ttgggagttt atgttggtta tccttcgaga 2820 atgtcattat tttgtgatga acgttctgat actactaagc gtcacactct ggatatgatt 2880 aaaattgtta tggatgtcat ttcagctaaa gctcaacgat catatggttt agataatggt 2940 ttgggaattg gctatagtat ttggagttgt catcgtagtt caagatatat ttattctgat 3000 ttttataagt ctaaagtttc gcagttatta gagatggaca aaaccttgct ttttaatttc 3060 attgtatcgc acgatgaaac agaaaagtca atccgtttta tttatccttt cgttactgtc 3120 atgtgttctc ctatttcttg gcctatgtta acctttgtaa tgaatgatat ttttgagcgt 3180 aataagttta taacatataa aagtaaagct tttacttctc ttaaccgtga tggtgcttat 3240 atgctaatta atcagatgtt ttttaccagc aacgaacaac acatgttcca atttgttgac 3300 tacgtcaaac atcagtcgaa aattgttgaa ctcaaattaa actcaaattt tttgaattgg 3360 gaagctagag atcattcggg ttttacattc ggagagcatt tactgcgttt taaacgtttg 3420 cgtcatctga cagacagcag aaaaaatgaa cttggattgg gagatatcga agttatggtt 3480 cataatttga ataaatattt agatggcaat caggtgttgt taagttttaa tagtatttca 3540 gtgctgaagg ctcacaagat tgtagtgcct tacggattaa tgtacgcgaa tcataataga 3600 tcaaaaatcg atcaatcttt gactgttaga acagaatctc tcgaagaaag ggtatatttg 3660 gattctatat ttttgaagca tatgctagat tataaaactg tgcctaaaga tttagaagta 3720 ctgaagactc atgctctctg ttccgttcgt ttaagaattt atggtgattt tgattatgct 3780 tgtgaaaaag atggtgttat cgaacctagt tctgacgctc agttcaatat cattttacct 3840 tttttacctg gttatcattt aaacagtggt tatcccaaat tatttttgta ttccactttg 3900 cccaccgtgc atgatagaga tatttggggt actttaggag aaataacagg atctttaggc 3960 gcttcttttg atgtagatgc tgcgatagaa tttggtgcac atgtgtttaa tattaatcca 4020 agtttggttg atgccgcagg cactgctatt gggattcctc aaggattatt gaatcattat 4080 aaaaatttgg ttaacgcttt tgtcactaat aacttcaatt taaaatatca ttccatattt 4140 ttaaacgtaa aatattttgg tttaaatggc agtttaaaac atttttctac ttttggagac 4200 tattcaagtc gtcttgttcg ctttgactta atacataagt tggatagata tcataatgtt 4260 tttgtacgtg attttatttt tgcttacatt catgaactta atgggcgcag agtgtatctc 4320 gattatagtt tgcatagtct gctgttagtc atgtctcgag gatctataaa gtattttaca 4380 tctcatctct ctcaattatt taatcctatg cttactctgg agttcgactg ataaggcgtt 4440 cccgattttg aaactatgaa gtgagcgtgg ttagtgtcca tggcggaaac agcagatgtc 4500 //