ID   FR693268; SV 1; linear; genomic RNA; STD; VRL; 774 BP.
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AC   FR693268;
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DT   22-SEP-2010 (Rel. 106, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
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DE   Tomato spotted wilt virus segment S partial NP gene for nucleocapsid,
DE   isolate TomUSA, genomic RNA
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KW   .
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OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
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RN   [1]
RP   1-774
RA   Moury B.;
RT   ;
RL   Submitted (21-SEP-2010) to the INSDC.
RL   Moury B., Institut National de Recherche Agronomiq, Station de Pathologie
RL   Vegetale, Domaine St Maurice, BP94, F-84143 Montfavet Cedex, FRANCE.
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RN   [2]
RA   Tentchev D., Verdin E., Marchal C., Jacquet M., Aguilar J.M., Moury B.;
RT   "Evolution and structure of Tomato spotted wilt virus populations: evidence
RT   of extensive reassortment and insights into emergence processes";
RL   J. Gen. Virol. 92(Pt 4):961-973(2011).
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DR   MD5; 8435e272d40f20c3c836bf816661bcde.
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FH   Key             Location/Qualifiers
FH
FT   source          1..774
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /segment="S"
FT                   /isolate="TomUSA"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="Solanum lycopersicum"
FT                   /collection_date="1995"
FT                   /db_xref="taxon:3052585"
FT   CDS             1..>774
FT                   /gene="NP"
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:E1Y6M3"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:E1Y6M3"
FT                   /protein_id="CBX24354.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLGNLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMTEDQVKKGKEYAAILSSS
FT                   NPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLTELA"
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SQ   Sequence 774 BP; 251 A; 132 C; 175 G; 216 T; 0 other;
     atgtctaagg ttaagctcac taaggaaagc attgttgctt tgttgacaca aggcaaagac        60
     cttgagtttg aggaagatca gaatctggta gcattcaact tcaagacttt ttgtctagga       120
     aaccttgacc agatcaaaaa gatgagcatt atttcatgtc tgacattcct gaagaatcgt       180
     cagagcataa tgaaggttat taagcaaagt gattttactt ttggtaaaat taccataaag       240
     aaaacttcag acaggattgg agccactgac atgaccttca gaaggcttga tagcttgatc       300
     agggtcaggc ttgttgagga aactgggaat tctgagaatc tcaatactat caaatctaag       360
     attgcttccc accctttgat tcaagcctat ggattacctc ttgatgatgc aaagtctgtg       420
     aggcttgcca taatgctagg aggtagctta cctcttattg cttcagttga tagctttgag       480
     atgatcagtg ttgtcttggc tatatatcag gatgcaaaat acaaggacct cgggattgac       540
     ccaaagaagt atgacaccag ggaagcctta gggaaagttt gcactgtgct gaaaagcaaa       600
     gcatttgaaa tgactgaaga tcaggtgaag aaggggaaag agtatgctgc tatacttagt       660
     tccagcaatc ctaatgctaa aggaagtgtt gctatggaac attacagtga aactcttaac       720
     aagttctatg aaatgtttgg ggttaaaaaa caggcaaaac tcacagaact tgct             774
//