ID   FR772086; SV 1; circular; genomic DNA; STD; VRL; 1360 BP.
XX
AC   FR772086;
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DT   10-JAN-2012 (Rel. 111, Created)
DT   10-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE   Hollyhock yellow vein virus associated symptomless alphasatellite, isolate
DE   [Pakistan:17-5:06] Lahore2
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KW   .
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OS   Hollyhock yellow vein virus associated symptomless alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
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RN   [1]
RP   1-1360
RA   Zia ur Rehman M.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Zia ur Rehman M., University of the Punjab, School of Biological Sciences,
RL   Lab 10, SBS, University of the Punjab, Lahore54590, PAKISTAN.
XX
RN   [2]
RA   Zia Ur Rehman M., Haider M.S.;
RT   "Begomoviruses infecting hollyhock in Pakistan";
RL   Unpublished.
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DR   MD5; c5dc88a09f9e5dc5fbc53a76b61f795c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1360
FT                   /organism="Hollyhock yellow vein virus associated
FT                   symptomless alphasatellite"
FT                   /host="Alcea rosea"
FT                   /isolate="[Pakistan:17-5:06] Lahore2"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Lahore"
FT                   /isolation_source="host leaves"
FT                   /collected_by="Muhammad Zia Ur Rehman"
FT                   /collection_date="2006"
FT                   /clone="YBAPA-2 DNA-1"
FT                   /note="alphasatellite"
FT                   /db_xref="taxon:944996"
FT   CDS             80..949
FT                   /gene="alpha Rep"
FT                   /product="replication protein"
FT                   /db_xref="GOA:H1ZWP9"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:H1ZWP9"
FT                   /protein_id="CBY89000.1"
FT                   /translation="MPSIRSVCWCFTLNFTGDVPELTFDNKGVQYAVWQHEKVSHDHLQ
FT                   GFLQMKGRRSLLQTKKVFEGYHPHLEVMRAPSAEIARDYCAKEESRVSGPWIFGEFVPM
FT                   GSNKRKLTELLDNSDNEIEEPQKYRRAMAMKMTKESHQWALENAFPFELKDWQERLSGD
FT                   LSLYPDDRTIFWVYGPTGGEGKSQFAKYLGLNKNWLYLPGGKVNDMMYMYCKKPKCNLV
FT                   IDYPRCNKDFVNYAFLEMVKNRTVYSYKYEPVGFIDPTSNVHVVVMANFLPDYERISED
FT                   RIKLIDLS"
XX
SQ   Sequence 1360 BP; 405 A; 265 C; 291 G; 399 T; 0 other;
     acccggcctc agcccccgcc cccttatgtt ttttctctga attgcccctc ctctcactaa        60
     gaagctttcc tttagaaaaa tgccttccat tcgctctgtt tgctggtgtt tcactttgaa       120
     tttcacaggt gacgtccccg aactgacgtt cgacaacaaa ggcgtccagt acgccgtctg       180
     gcaacatgag aaggttagcc acgatcacct tcaaggtttt ctgcagatga aaggtcgacg       240
     ttccctcttg cagaccaaga aggtgtttga aggttaccat cctcatctcg aagtgatgag       300
     agctccttca gcagaaatcg cccgcgatta ctgcgcgaag gaagaatcta gggtttctgg       360
     accctggatt tttggtgaat ttgtcccgat gggttcgaac aagcgtaaat tgactgagtt       420
     gctcgacaat tcagataacg agatcgaaga accccaaaaa tacagacgag ccatggcgat       480
     gaagatgact aaggagtcac atcagtgggc ccttgaaaat gcctttccat ttgaattaaa       540
     ggattggcag gagcgtctgt ccggagattt gtctttatac ccagatgacc gcactatctt       600
     ctgggtgtat ggccccactg gtggggaagg aaagtcccag tttgcaaaat acctgggttt       660
     gaataaaaat tggctctatc ttcctggcgg gaaagttaat gacatgatgt acatgtattg       720
     caagaagcca aaatgtaatt tagtaataga ttatcctagg tgtaataagg attttgttaa       780
     ttatgcattt ttagaaatgg ttaagaatag gacagtatat agttataagt atgagcctgt       840
     gggatttata gatcctacgt ctaatgtaca tgtagttgta atggctaatt tcctccctga       900
     ttatgagagg attagcgaag atcgaataaa attaatagat ttatcttaat taattgtctt       960
     atcatcatca ttgatttgaa aaaaacacag gccgcgcagc ggccataacc aataattttg      1020
     cttcttgaag acaagaagga atgaaatgaa agaagatgat ttccttacat attgtgggtc      1080
     ccacataata atatttatta aataaatata aaatataaat aattaatatt aatgggctca      1140
     aatattttaa tgataatggg tttcggccca acagatgtaa agccccaatc gggataaaat      1200
     attgactggt caactcatta atggtattat ggtcatttca tgttgaaaaa tttgtacgac      1260
     ctttggcccc tgcgcatttt agcgaaaaag tgttggcccc tgcgcacgtt aacctttggc      1320
     ccctataaat agattaacgc tgaggccgga tcatagtatt                            1360
//