ID   GQ258986; SV 1; linear; genomic RNA; STD; VRL; 808 BP.
XX
AC   GQ258986;
XX
DT   19-MAY-2010 (Rel. 104, Created)
DT   20-MAY-2010 (Rel. 104, Last updated, Version 2)
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DE   Broome virus segment S4, complete sequence.
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KW   .
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OS   Broome virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus;
OC   unclassified Orthoreovirus.
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RN   [1]
RP   1-808
RX   DOI; 10.1016/j.virol.2009.11.048.
RX   PUBMED; 20350736.
RA   Thalmann C.M., Cummins D.M., Yu M., Lunt R., Pritchard L.I., Hansson E.,
RA   Crameri S., Hyatt A., Wang L.F.;
RT   "Broome virus, a new fusogenic Orthoreovirus species isolated from an
RT   Australian fruit bat";
RL   Virology 402(1):26-40(2010).
XX
RN   [2]
RP   1-808
RA   Thalmann C.M., Wang L.-F.;
RT   ;
RL   Submitted (10-JUN-2009) to the INSDC.
RL   Commonwealth Scientific and Industrial Research Organisation (CSIRO),
RL   Livestock Industries Australian Animal Health Laboratory, Private Bag 24,
RL   Geelong, Victoria 3220, Australia
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DR   MD5; dc44c0463d1766dee418f50e4203879e.
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CC   GenBank Accession Numbers GQ258977-GQ258986 represent the complete
CC   genome of Broome virus from Pteropus scapulatus.
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FH   Key             Location/Qualifiers
FH
FT   source          1..808
FT                   /organism="Broome virus"
FT                   /segment="S4"
FT                   /host="Pteropus scapulatus (little red flying fox)"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:667093"
FT   CDS             23..364
FT                   /codon_start=1
FT                   /product="small non-structural protein p13"
FT                   /note="fusion-associated small transmembrane protein; FAST
FT                   protein"
FT                   /db_xref="GOA:D6MM29"
FT                   /db_xref="UniProtKB/TrEMBL:D6MM29"
FT                   /protein_id="ACU68609.1"
FT                   /translation="MGSGPSNFVNKVDGASAPIKEHAIPSLTSDLKDYLYTIVTAVILL
FT                   VILWFLYRYYKDKKARKKKEDILLRLYGRGLNLSRLDPSVICSLGGSAPNLQHRGLERT
FT                   EDKLVNPFI"
FT   CDS             370..744
FT                   /codon_start=1
FT                   /product="small non-structural protein p16"
FT                   /db_xref="UniProtKB/TrEMBL:D6MM30"
FT                   /protein_id="ACU68610.1"
FT                   /translation="MEFPSFEWLSFNELKKITVGEVAPFLCDHECKAWMPFWIIMRQES
FT                   HFEGMSTLRMVHLFHEWVWMCLHENECLRNRYTLWFVECLQTRFGDLNNADYWIGRRFA
FT                   KFVYDRCLLLQDDEMMEIDV"
XX
SQ   Sequence 808 BP; 221 A; 113 C; 210 G; 264 T; 0 other;
     gtcaaaatat ggttctgaac acatggggag cggtccttca aacttcgtga ataaggtgga        60
     cggagcgagt gcacctatta aggagcatgc tataccctcg ctaactagtg atttgaaaga       120
     ttacttatat actatagtaa cggcagtcat tttgttagtt atattgtggt tcttatatcg       180
     atattacaaa gataagaagg cgcggaaaaa gaaagaagat atacttttgc gtttatatgg       240
     gcgtgggctg aatttgtcac ggttagaccc tagtgttata tgttcgttag gtggttctgc       300
     tccaaattta cagcatagag gactggaacg aacggaggat aaattagtga acccttttat       360
     atagattcaa tggagtttcc tagctttgaa tggttgtctt ttaatgagtt aaagaaaatt       420
     actgtcgggg aggtggcgcc atttttatgt gatcatgagt gtaaggcttg gatgccattt       480
     tggattatca tgcgtcagga atcacatttt gaagggatgt ctacattacg gatggtacat       540
     ctatttcatg aatgggtgtg gatgtgtttg cacgaaaatg agtgtttacg aaatcggtat       600
     actttgtggt ttgtcgaatg tttgcaaaca cgtttcggtg atttgaataa tgcagattat       660
     tggattgggc gacgttttgc gaaatttgtt tatgataggt gtttattgtt acaagatgat       720
     gagatgatgg aaattgatgt ctaatgagag gcgaggttgt aggcccaccc cattagcgcc       780
     gtgcagggtt gcgaatcatg tcttcatc                                          808
//