ID GQ290649; SV 2; linear; genomic RNA; STD; VRL; 2978 BP. XX AC GQ290649; XX DT 29-JUL-2009 (Rel. 101, Created) DT 07-APR-2010 (Rel. 104, Last updated, Version 3) XX DE Cryphonectria nitschkei chrysovirus 1 from Cryphonectria nitschkei BS122 DE RNA-dependent RNA polymerase gene, complete cds. XX KW . XX OS Cryphonectria nitschkei chrysovirus 1 OC Viruses; Riboviria; Chrysoviridae; Alphachrysovirus. XX RN [1] RP 1-2978 RX DOI; 10.1007/s12275-009-0206-7. RX PUBMED; 19763418. RA Kim J.M., Kim J.A., Park J.A., Park S.M., Cha B.J., Yang M.S., Kim D.H.; RT "Molecular diversity of chrysoviruses in Korean isolates of a new fungal RT species, Cryphonectria nitschkei"; RL J. Microbiol. 47(4):441-447(2009). XX RN [2] RP 1-2978 RA Kim D.-H., Kim J.-M., Kim J.-A., Park J.-A., Park S.-M., Cha B.-J., RA Yang M.-S.; RT ; RL Submitted (19-JUN-2009) to the INSDC. RL Institute of Molecular Biology and Genetics, Research Center of Bioactive RL Materials, Chonbuk National University, 664-14 Duckjin-Dong, Duckjin-Gu, RL Jeonju, Chonbuk 561-756, Republic of Korea XX RN [3] RC Sequence update by submitter RP 1-2978 RA Kim D.-H., Kim J.-M., Kim J.-A., Park J.-A., Park S.-M., Cha B.-J., RA Yang M.-S.; RT ; RL Submitted (02-APR-2010) to the INSDC. RL Institute of Molecular Biology and Genetics, Research Center of Bioactive RL Materials, Chonbuk National University, 664-14 Duckjin-Dong, Duckjin-Gu, RL Jeonju, Chonbuk 561-756, Republic of Korea XX DR MD5; d1ea5dcf0bf4cf0dffcec44938b6ffff. XX CC On Apr 2, 2010 this sequence version replaced gi:254688178. XX FH Key Location/Qualifiers FH FT source 1..2978 FT /organism="Cryphonectria nitschkei chrysovirus 1" FT /host="Cryphonectria nitschkei BS122" FT /mol_type="genomic RNA" FT /collection_date="2001" FT /db_xref="taxon:399394" FT CDS 83..2971 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:C7EUC7" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:C7EUC7" FT /protein_id="ACT79255.1" FT /translation="MVGLKERQIKSQLAQGFGPRAAARSAVRHDRAQLVPLIREASNAF FT GSSKNGAEYEARISASMSRYDSRRRSNLFAIVMPAGHGKTHYAKKFGFIDVDELATPAQ FT HNELVSMRQAAVSGITTWSAHNMAWVGILNKTLDLFDYSKPNIIFVHHEEAALEIGAVV FT LAGLRLTKTAFEMNIRTRASDDKLFSHASYDSWGKMRFTPNMKDGLTNREVERLIIKIL FT CVNNLPVAAPHMYEVNRSPYYAQSCPPWVLRGESPPDRDVDISELVSLFEGGIIPREAV FT DYYVKQGYTKTSLDFGLGHGDWAPTLAKVASAIGEPQDFDPDGDLMEVFPPRETKEVTR FT SNVTLRRLDETFAIFEHDDVYSLCTYHVGEPHVFVCSLIAEWKGLMVRLPCARLVARWF FT CVSYDKWPNILKELHTLVRTSRFLMNTEITEKERQALMYMDLLVGRTSYVINEMNEVDK FT RGGDTYESEHLSYDPNLQLFTREQYKKDFPRAVRKAYARMRYTKQPKLNVNSFRQFYRR FT RKEWLTKGSLVYNHLPPESRKTVVQALDSVNQSIIDLEARHNKQSLFEEMDLAELLRHV FT GDASDFNTTKTMIKFETGRKDRTLLPGTLIHFIVLTYVLELAERLSQVGSVRLNAMADE FT EFLWYDRKITTGLFHVLYDWADFNEQHTASEMSAVIKELDLAVQAPEDYHIFIHAISES FT MYNMSLHDRDGNRHKIWRGLYSGWRGTTWINSVLNFCYIDVALTSFERIYGYDPVVYID FT HGGDDVDAAVDSATSMPKFMAIMDDMMFNANAWKQLFSTRSEFFRNTVTSSRAYASPTR FT ALASFIAGDWEGSGKVTMRERVVNILDQASKMARRGIEHEFANGLAICALTHWCKLRKE FT DSWVSMPRVIIHGREEDGGLGVPDWDGCVWKLQEQVPDMSGSWLTMLKPSMLSSRDYVD FT ELSKDVERLSLELVRKEQLAEKFAKDGHELGH" XX SQ Sequence 2978 BP; 813 A; 630 C; 830 G; 705 T; 0 other; tctggactgg gggcgggact ccgaggaacg atgataaaaa aacaaaaacc tcatctctgt 60 atttgataaa caattgatca agatggtggg gttaaaagaa agacaaatta agtctcaatt 120 ggctcaaggt ttcgggcctc gcgcagcagc cagatcagct gttagacatg acagggccca 180 gctggtgcca ttaatacgag aagcatctaa tgcctttggg tccagcaaaa atggggcaga 240 gtacgaggca aggataagcg catcaatgtc gagatacgat tctcgtagac ggagcaatct 300 gtttgcaata gtcatgcctg ctggtcacgg gaagacccac tacgcaaaga agtttggttt 360 catagatgtt gatgagctag cgacaccagc ccagcacaat gagttagtga gtatgagaca 420 ggccgctgta tctggtatca ctacgtggtc agcacacaac atggcgtggg taggtatatt 480 aaataaaact ctagacctat tcgattactc gaagccgaac ataatctttg tccatcatga 540 agaagctgct ttggaaatag gtgcagtagt gctggcgggc ctccggctga ctaaaactgc 600 tttcgagatg aacatacgta cacgtgcctc tgatgacaag ctgttctcgc atgcaagcta 660 tgacagctgg ggcaagatgc gttttacacc taacatgaag gacggcctta caaacagaga 720 agtggagcga ctgattatta agatcctctg cgtgaataac cttcctgttg cagcaccaca 780 tatgtacgaa gttaaccgct caccgtacta cgctcagtct tgtccaccat gggtgctgcg 840 aggtgagtcg ccccccgacc gtgacgttga tatctctgaa ttagttagcc ttttcgaagg 900 tggtatcata ccgcgagagg cggtcgatta ttacgttaaa caagggtaca ctaaaacaag 960 cctggacttc ggtttaggtc atggcgattg ggcaccgacg cttgccaagg tggcttcggc 1020 catcggcgag ccacaggatt tcgatccgga cggtgatctc atggaagttt ttccgccgcg 1080 ggagactaaa gaagtgacga ggtcgaacgt cacgcttagg cggttggatg agacgtttgc 1140 tatatttgag cacgatgatg tctattctct ctgcacttac catgttggcg agccacatgt 1200 tttcgtctgc agcttgatcg ccgaatggaa aggcctgatg gtcaggttac cgtgcgctag 1260 gctcgtagca cgttggtttt gtgtatcata cgataagtgg cccaatatcc taaaagagct 1320 ccacacgctc gtgcggacta gcaggttcct gatgaatact gagataacag agaaagagag 1380 gcaggctctg atgtatatgg acctgctggt ggggcgtacc tcgtatgtaa taaacgagat 1440 gaatgaggtt gacaagcgcg gaggggacac gtatgagtcc gagcacctgt cgtacgatcc 1500 gaacctccag ttattcacgc gcgagcagta caagaaagat ttcccacgtg ccgtgaggaa 1560 ggcttacgcc cgtatgcgtt ataccaagca gccgaagctc aatgtcaata gctttaggca 1620 gttctaccgg cgtaggaagg agtggcttac taagggatca ttagtctata accaccttcc 1680 tccggaatcg agaaagactg ttgtgcaagc tctggattct gttaaccaat cgataattga 1740 cctggaggct aggcataata agcaatcttt atttgaggag atggacctag cggagttact 1800 gaggcatgtt ggcgatgcat cagattttaa tacaactaaa acgatgatta agtttgagac 1860 agggcgtaag gacaggacat tactacccgg cacacttata cattttatag tactaaccta 1920 cgtgttggag ttggctgaaa gactgagcca ggtgggcagc gttcggttga atgctatggc 1980 agatgaagag ttcttatggt atgataggaa gataactacg gggctattcc atgtacttta 2040 cgattgggcc gatttcaatg aacagcacac ggcgtctgag atgagtgcag tcatcaagga 2100 gttagacctg gcggtgcagg cgccggagga ctaccacata tttatacatg ccataagtga 2160 gtctatgtat aacatgagtt tgcatgatag ggatggcaac cggcacaaaa tatggcgtgg 2220 tctatattcc ggatggaggg gaacgacatg gatcaattca gtcctaaact tctgttacat 2280 tgacgtggcc ttaacaagct ttgagcgtat atacggttac gacccggtgg tatatataga 2340 tcatggcggc gatgatgtgg atgcagcagt ggactcagca acttcaatgc ccaagttcat 2400 ggccatcatg gatgacatga tgtttaatgc taatgcatgg aagcaactct tcagtacaag 2460 gagcgaattt ttccgtaata ccgtgacgtc aagcagggct tacgccagcc caactagggc 2520 attggctagt ttcatagccg gcgattggga aggcagtggc aaggtcacga tgagagaaag 2580 ggtggtgaat attctggatc aggcatcgaa gatggccaga cggggtatcg aacacgaatt 2640 cgcaaacgga ctagcaatat gcgcactgac acattggtgc aagctgcgca aggaagacag 2700 ctgggtcagt atgccacgag tgataatcca cggccgggaa gaagacggtg gattgggtgt 2760 cccggattgg gacgggtgtg tttggaagct ccaggagcag gtgccagata tgtcagggtc 2820 ttggctcaca atgctgaaac cgagcatgct gtcaagccgg gactatgtgg acgaattaag 2880 caaagacgtg gagcgcctgt cactcgaact ggtgcgcaag gaacagctgg cggagaaatt 2940 tgctaaagat ggccatgaac ttgggcattg aagttgca 2978 //