ID   GQ475415; SV 1; linear; genomic RNA; STD; VRL; 870 BP.
XX
AC   GQ475415;
XX
DT   18-AUG-2010 (Rel. 105, Created)
DT   15-FEB-2013 (Rel. 115, Last updated, Version 5)
XX
DE   Leek yellow stripe virus isolate 374-LYSV1 coat protein gene, partial cds.
XX
KW   .
XX
OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-870
RA   Parrano L., Afunian M., Pagliaccia D., Douhan G., Vidalakis G.;
RT   "Characterization of viruses associated with garlic plants propagated from
RT   different reproductive tissues from Italy and other geographic regions";
RL   Phytopathol. Mediterr. 51(3):549-565(2012).
XX
RN   [2]
RP   1-870
RA   Afunian M.R., Parrano L., Pagliaccia D., Vidalakis G.;
RT   ;
RL   Submitted (13-AUG-2009) to the INSDC.
RL   Plant Pathology and Microbiology, University of California, 900 University
RL   Ave, Riverside, CA 92521, USA
XX
DR   MD5; 3299b0dc7634d93147821c4fdf8b8faa.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..870
FT                   /organism="Leek yellow stripe virus"
FT                   /host="Allium sativum (garlic)"
FT                   /isolate="374-LYSV1"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2008"
FT                   /PCR_primers="fwd_seq: ggcaaataatgaattagatgcaggca, rev_seq:
FT                   tcactgcatatgccgaccatcaag"
FT                   /db_xref="taxon:42004"
FT   CDS             <1..870
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:E0X571"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E0X571"
FT                   /protein_id="ADL59380.1"
FT                   /translation="ANNELDAGMQTSKKHKDGNDKSIEQRDPASSQISSLGKKDGEGGS
FT                   GMSRNKDRDVNVGTTGTFSVPRIKQIPQKGISIPMDGGKSILNLDHLLQYKPNQLNISN
FT                   TRATVAQFKTWMERVQEDYGVTQGEMGIILNGLMVWCIENGTSPNINGTWTMMDGDEQV
FT                   AYPLRPIVEHAKPTLRQIMAHFSALAEAYIEMRNSEQAYMPRYGLQRNLTDMGLARYAF
FT                   DFYEVTSRTPVRAREAHAQMKAAALRNSRSRLFGLDGNVTTTDEDTERHTAHDVNARMH
FT                   HLDGRHMQ"
XX
SQ   Sequence 870 BP; 304 A; 169 C; 213 G; 184 T; 0 other;
     gcaaataatg aattagatgc aggcatgcaa acaagtaaga aacataagga tggtaatgat        60
     aaatccattg aacaacgcga tccagcatca tcacaaatta gttcactagg caagaaagat       120
     ggtgaaggcg gttcaggaat gagtagaaac aaagacaggg atgtgaacgt tggcacaaca       180
     gggactttta gtgttccacg aatcaaacag ataccacaga aaggtatttc gataccaatg       240
     gacggaggaa agtcaatact caacttagat cacttactac agtataaacc aaatcaattg       300
     aatatatcga acacaagagc cacagtggca caatttaaaa cctggatgga gagagtgcaa       360
     gaggattatg gtgtcactca aggtgaaatg ggcataattc taaatggttt gatggtgtgg       420
     tgcatcgaaa atggaacctc accaaatata aatgggactt ggactatgat ggatggcgat       480
     gagcaagtcg cgtacccttt acggccgatc gttgaacatg cgaaaccaac cttacggcaa       540
     ataatggcgc atttttcagc actcgcggag gcgtatattg aaatgagaaa ttcagagcag       600
     gcttatatgc caagatatgg actacaaaga aaccttacag acatgggcct cgcacggtat       660
     gcatttgatt tttatgaagt cacatcaaga acaccagtta gagcgcgcga ggctcacgca       720
     caaatgaaag cagcggccct acgtaattca aggtcaagac tgtttggact agacggtaac       780
     gtcacaacca cggatgagga cacggagagg cacacagcac atgacgtgaa tgcacggatg       840
     caccatcttg atggtcggca tatgcagtga                                        870
//