ID GU199588; SV 1; circular; genomic DNA; STD; VRL; 2732 BP. XX AC GU199588; XX DT 16-DEC-2009 (Rel. 103, Created) DT 16-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Tomato yellow leaf curl China virus clone SC65A-3, complete genome. XX KW . XX OS Tomato yellow leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2732 RA Xiong Y., Qing L.; RT "Molecular Characterization and Variation of Tomato yellow leaf curl China RT virus on tomato in Sichuan Province"; RL Unpublished. XX RN [2] RP 1-2732 RA Xiong Y., Qing L.; RT ; RL Submitted (12-NOV-2009) to the INSDC. RL Plant Pathology, College of Plant Protection, Tiansheng Road 2, Chongqing RL 400716, China XX DR MD5; 26be82836d732712241ecc4143342910. XX FH Key Location/Qualifiers FH FT source 1..2732 FT /organism="Tomato yellow leaf curl China virus" FT /host="tomato" FT /isolate="SC65" FT /mol_type="genomic DNA" FT /country="China" FT /collection_date="12-Aug-2009" FT /clone="SC65A-3" FT /note="PCR_primers=fwd_name: SC65-F, rev_name: SC65-R" FT /db_xref="taxon:185793" FT gene 129..476 FT /gene="AV2" FT CDS 129..476 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:D2KBY8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2KBY8" FT /protein_id="ACZ71235.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGHDLIRDL FT ILVIRARDYGEASRRYTHFHSRLEGASPAELRQPIHGACCCPHCPRHQKANVVKQAHVS FT EARDVPDVQKP" FT gene 289..1059 FT /gene="AV1" FT CDS 289..1059 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D2KBY9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D2KBY9" FT /protein_id="ACZ71236.1" FT /translation="MAKRPADILISTPASKERRRLNFDSPYMGRAAVPTVRVTRKQMWS FT NRPMYRKPATYRMYRSPDVPRGCEGPCKVQSYEARHDVSHTGKVICVSDVTRGNGITHR FT VGKRFCVKSIYVIGKIWMDENIKVKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP FT STATVKNDLRDRFQVRRKFYSTITGGQYACKEQALVKKFIRVNTHVVYNHQEQAKYENH FT TENALLLYMVSTHASNPVYATLKVRIYFYDSQMN" FT gene complement(1056..1460) FT /gene="AC3" FT CDS complement(1056..1460) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:D2KBZ0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2KBZ0" FT /protein_id="ACZ71237.1" FT /translation="MDSRTGELLTAAQAENGVFIWTVKNPLIFKITRHLETPFLQNHDI FT ITLQVQFNYNLRKALGIHKCFLTYEIWTRLHPQTLRFLRVFKYQCIKYLDGLGVISINN FT VIRAISHVLYNVLEGTIDVIEDHDIKLNIY" FT gene complement(1201..1605) FT /gene="AC2" FT CDS complement(1201..1605) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:D2KBZ1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D2KBZ1" FT /protein_id="ACZ71238.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKKTTRRRRVDLPCGCSYFLAIG FT CHDNGFTHRGTTHCSSSREWRFYLDGQKSPYFQDNQTPRDTISAEPRHNHTTSPIQLQP FT EESVGDTQMFSNLRNLDSFTSSDLAFLKSI" FT gene complement(1508..2593) FT /gene="AC1" FT CDS complement(1508..2593) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:D2KBZ2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2KBZ2" FT /protein_id="ACZ71239.1" FT /translation="MAPPKKFMINAKNYFLTYPHCSLSKDEALSQILKLSTPTNKLFIR FT ICREQHEDGSPHLHVLIQFEGVFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSTDVKTYM FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSRSKASALNILREKAPKDFVLQFH FT NLNNNLDKIFTPPIEEYISPFCSSSFDQVPEELDEWATDNVVSAAARPLRPVSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHCLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAVKNAIFVTLQGPL FT YSGSYQGATPNRQEDNPTTES" FT gene complement(2143..2436) FT /gene="AC4" FT CDS complement(2143..2436) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2KBZ3" FT /protein_id="ACZ71240.1" FT /translation="MGLLTCMSSSNSKVYSNVKTTDSSISHPQAGQHISIRTFRALKAQ FT QMLKHTWKKTETCWIMEFSRSMEDQLEEVANLPTTHMPRQSIHGPKLRPSIY" XX SQ Sequence 2732 BP; 732 A; 546 C; 608 G; 846 T; 0 other; accggatggc cgcgcgattt ttttagcgtg gtccccatgg gcatatatgt ccaatcatat 60 ccgctcctca aagcttaatt atttaatggt ccactataaa acttagcccc caagtattca 120 cgttaaacat gtgggatcct ctactcaacg agttccctga tactgtacat ggctttagat 180 gcatgctagc aattaagtat ttgcaattag ttgaaaatac ttactctccc gacacattag 240 gtcacgattt aatacgtgat ttaattttag ttatacgtgc tagagattat ggcgaagcgt 300 cccgccgata tactcatttc cactcccgcc tcgaaggagc gtcgccggct gaacttcgac 360 agcccataca tggggcgtgc tgctgtcccc actgtccgcg tcaccagaaa gcaaatgtgg 420 tcaaacaggc ccatgtatcg gaagcccgcg acgtaccgga tgtacagaag ccctgatgtt 480 cctagaggtt gtgaaggtcc atgtaaagtt caatcatatg aggcccgtca tgatgtttct 540 cacactggta aggttatttg tgtatcggat gttacacgtg gtaatggaat tacccaccgt 600 gttggcaaga ggttttgtgt taaatcaata tacgtgattg ggaagatatg gatggatgag 660 aatattaaag tcaagaacca cacaaacact gtaatgtttt ttctggttag agatcgccgc 720 ccaagtggca ctcctatgga ttttcaacaa gtatttaatt gttacgacaa cgaacccagc 780 actgccactg taaaaaacga tctaagggat cgttttcaag ttcgtcgtaa attctattct 840 acgattacgg gaggacaata cgcctgtaag gagcaggctt tggtgaagaa atttatacgt 900 gttaacacac acgttgttta taatcatcaa gaacaggcga agtatgagaa tcatacggag 960 aatgctttgt tgttgtatat ggtttctact catgcaagta atcctgtata tgcgactttg 1020 aaagtccgca tttatttcta cgattctcaa atgaattaat aaatattgag ttttatatca 1080 tgatcttcaa ttacatcaat tgtgccttct agtacattgt ataatacatg agatattgcc 1140 ctaattacat tgttgatgct aatcactcct aatccatcta aatatttaat acattgatac 1200 ttaaatactc ttaagaaacg caaggtctga ggatgtaaac gagtccagat ttcgtaggtt 1260 agaaaacatt tgtgtatccc caacgctttc ctcaggttgt agttgaattg gacttgtagt 1320 gtgattatgt cgtggttctg cagaaatggt gtctctaggt gtctggttat cttgaaaata 1380 aggggatttt tgaccgtcca gataaaaacg ccattctctg cttgagctgc agtgagtagt 1440 tcccctgtgc gtgaatccat tatcgtgaca acctatggcg agaaagtagg aacagccaca 1500 gggtagatca actctccgtc gtcgggttgt cttcttggcg attcggtgtt gcaccttgat 1560 aggaacctga gtagagtggg ccttggaggg tgacgaagat cgcattttta accgcccagt 1620 ttcgaagtgc ggagttcttt tcctcttcca gatactcttt atagctggaa ttgggtcctg 1680 gattgcagag gaagatagtg ggtattccgc ctttaatttg aactggtttt ccgtatttgg 1740 tgttgctttg ccagtccctt tgggccccca tgaactcctt aaagtgcttt aggcagtgcg 1800 ggtctacgtc atcaatgacg ttgaaccaag catcattact gtacaccttt ggactcagat 1860 ccaaatgacc acataaataa ttatgtggtc ctaatgatct ggcccacatc gtcttccccg 1920 ttcgactatc accttctatg acaatactta ccggtctcaa aggccgcgca gcggcactga 1980 ccacgttatc tgtagcccat tcatcaagtt cttctggaac ttgatcaaaa gaagaagaac 2040 aaaagggaga aatatattcc tctatcggag gagtaaaaat tttatctaaa ttattattta 2100 aattatgaaa ttgtaaaaca aaatctttag gagctttttc cctcagtata ttgagggccg 2160 aagctttgga ccgtgaattg attgcctcgg catatgcgtc gttggcagat tggcaacctc 2220 ctctagctga tcttccatcg atctggaaaa ctccatgatc cagcacgtct ccgtcttttt 2280 ccatgtatgt tttaacatct gttgagcttt tagcgccctg aatgttcgga tggaaatgtg 2340 ctgacctgct tggggatgtg agatcgaaga atcggttgtt ttgacatttg aatacacctt 2400 cgaattggat gaggacatgc aggtgaggag acccatcttc gtgctgttcc ctgcagattc 2460 gtatgaataa tttatttgtt ggggttgata gttttagtat ttgggaaagt gcttcgtctt 2520 tgctgagtga gcagtgtggg tatgtgagaa aatagttctt ggcatttatc atgaatttct 2580 tagggggagc cattgactgg tcaatcgggt cctctcaaac ttggttatgc aattggggaa 2640 tgggtcctta tttatatgtg aggacctaaa tggcatatat gtaaatatgt ggtagaaatt 2700 caaaattcaa aagcggccat ccgtataata tt 2732 //