ID HM015510; SV 1; linear; genomic RNA; STD; VRL; 4784 BP. XX AC HM015510; XX DT 08-DEC-2010 (Rel. 107, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate Ab1NL2 segment M, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4784 RX PUBMED; 20881087. RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2011). XX RN [2] RP 1-4784 RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT ; RL Submitted (20-MAR-2010) to the INSDC. RL COMAV-Universidad Politecnica de Valencia, Camino de Vera 14, Valencia RL 46022, Spain XX DR MD5; 8c283925cdd2fbc16fe831bceaba02fe. XX FH Key Location/Qualifiers FH FT source 1..4784 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /host="Solanum lycopersicum" FT /isolate="Ab1NL2" FT /mol_type="genomic RNA" FT /country="Spain: Barcelona" FT /collection_date="2003" FT /note="biotype: N: non infecting resistant tomato Sw-5 and FT resistant pepper Tsw" FT /db_xref="taxon:3052585" FT gene 101..1009 FT /gene="Nsm" FT CDS 101..1009 FT /codon_start=1 FT /gene="Nsm" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:E5EW75" FT /protein_id="ADR66464.1" FT /translation="MLTFFSNKGSSKSAGKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDTSKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTDHHISNWKNDLFV FT GNGKQNANKVIKICPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMSSEKQV FT ILKGQGTITDPICFVFYLNWSIPKINNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDESCVVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1293..4700) FT /codon_start=1 FT /product="glycoprotein precursor" FT /note="precursor of glycoproteins Gn and Gc" FT /db_xref="GOA:E5EW76" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:E5EW76" FT /protein_id="ADR66463.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP FT EVYDDSAENDVPTAASIQRKAILETLTNLMLESQTPGTRQIREEESTIPIFAESTTQKT FT ISVSDLPNNCLNTSSLKCEIKGISTYNVYYQVENNGVIYSCVSDSAEGLEKCDDSLNLP FT KRFSKVPVIPITKLDNKRHFSVGAKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGEDVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAEIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLIGLITYPILLLINCLWKYFPFKCSNCGNLCIITHECTKICICNKSKA FT SKEHSSECPILSKETDHDYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLVILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDTIIESIFGTNIVIEG FT PNDCIENQNCVAHPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLNKNETSIPENILPRKSLIFDSVVDGKYRYMIEQ FT SLLGGGGAIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSRITEEVPYENALFQADIQADLHNDGITIGELIAHGPDGHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCVAIGKKSITIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKAFSLGKLKIVVDLPSDLFKIAPKRPSITSTRL FT NCNGCLLCGQGLSCILEFFSDLTFSTSISIDACSLSTHQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVVVEEPENIIDQNDEYAHGEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVILLIAFIFLAIYFCSILTTICKGYVKNESYKSRSKIEDD FT DDSEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4784 BP; 1542 A; 849 C; 852 G; 1541 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaatta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactt ttttcagtaa 120 taaggggtct tctaagtctg ccggaaagga tgaaggtccc ttagtttcac tagctaaaca 180 taatggtaat gttgaagtct caaaaccatg gtcttcttct gatgaaaagc ttgctttgac 240 taaagctatg gatacatcca aaggaaagat actgttgaac acagagggaa catcttcctt 300 tggaacctat gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgcaagaat 360 gatagtagat acagaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaacgg 420 gaagcagaac gctaataagg tcatcaagat ctgtccaact tgggacagca gaaaacaata 480 catgatgatt tctaggattg tgatatgggt ctgccccact ataccaaacc ctacaggaaa 540 acttgtggtt gccctagtcg atcccaacat gtcatctgaa aagcaggtca ttctgaaggg 600 tcaggggacg ataactgatc ctatatgttt tgtcttttat ctgaactggt ctattccaaa 660 aataaacaac actccagaaa actgctgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaagggggtt tcttttggta gtgtcatgta ttcttggaca aaggagtttt gtgattcacc 780 cagagctgat aaagacgaaa gttgtgtggt tatacctcta aacagagcta ttagagctag 840 atctcaagca ttcattgagg cttgcaagct gataattcct aaaggaaaca gtgaaaagca 900 gattaaaaaa cagcttaaag agttgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgatagtg ttgctcagtt atcttttgat gaaatatagt acttttaata 1020 ccacttattt aagcttaaat tgctgttaat tttgcatttt taaatcaaaa aacaaacaaa 1080 aacaaaaaac aaaaaagaaa aacaaaaaac aaaaaaatca aaaaaagaaa aaacaaaaac 1140 aaaataaggc tgaaaagcca aactttggtc cgaagactct ttttgttgtt ttttgtttat 1200 ttgtattttt tgtttgtttt ttgtttattt tatatataca taatctgact aatgtagaga 1260 attgaatcaa atttagcctg tggcaagcag cctcagacaa ggtgagagaa atccataggt 1320 ggccttcgtc ttgtcattgt atctttcatt aacatagggg ctttgatctc agaatcatca 1380 tcatcctcta tcttggatct agatttataa gattcattct tgacatatcc tttacaaatg 1440 gttgttagaa tagaacagaa ataaatcgca aggaaaataa atgcaataag caatatcact 1500 ctgatagtat caaaaaacga gccaaaataa cttgcaatga aattgaatgg gcttttaata 1560 taatcccaga agccccatgc tgaagaatca gaattatatt gttgttctcc atgagcatac 1620 tcatcatttt gatctattat gttctctggt tcttctacaa caacattgtt gaccagaacc 1680 tccacagaaa tatctggatt gccttctgga tacaacgtca ttttcttctt gtccggatta 1740 gcagaacaaa acattgttat gttgtattta tttgatcctt ttttaacagc cagttgatga 1800 gtagatagag agcaagcatc tatagaaatt gaggtagaaa atgtcaaatc cgagaaaaat 1860 tctaaaatgc aagataaacc ttgaccgcat agaagacagc cgttgcaatt taatcttgtt 1920 gaagttatgg aaggtctctt aggagcaatt ttaaaaagat cagatggaag atcaacgaca 1980 atcttgagtt tgcctaaact gaaagctttt tccaagaaaa aactagagaa atccttgaaa 2040 ctaacaggaa tatctgatat ttgctctaaa ccagatctaa atctgtatgt atcatatccg 2100 catgttttaa tagtgattga ttttttccct attgctacac aatcccaaga catgtcatct 2160 ccttctagag ttttcttagt aaaaataggc actccatcat gagtcaattg tgggtgacca 2220 aacattttga caggatcatt caagtttgca atatttccag aataaatatg gccgtcaggt 2280 ccatgagcta tcagttcacc tatagtgata ccatcattgt gcaaatctgc ttgtatatca 2340 gcttgaaaca aggcattttc ataaggaacc tcttcagtga tccttgagca ctgacctcct 2400 aaaataccag aaatacaaac atctgccact atggttgatt ttagcactga ataaattctg 2460 tatgatttat ccatgtcata gatattccga cagaatccac atgtagcacc ttcattaatt 2520 gcaaaacacc aagcttcttc acatccccaa taagaagttg gtgttataca aaaatcttgg 2580 aaacctgtta aagcttgatt ttttctgcaa gtgtcacagt ttcctgtgca agttgaataa 2640 aaatctgtgt gagtgctttg gataggagct gttgtgtatt tttctgacac ttcataatga 2700 attcccacac ttttgatata aatcacaaat tttttggctg tttccgaggt tttatcattc 2760 aacatgaata tagcccctcc tcctcctaaa agagattgtt ctatcatgta tctatatttc 2820 ccgtctacaa cagaatcaaa gatcaatgat tttctaggca gaatgttctc tggtatgctt 2880 gtctcatttt tgtttagaga gtctcctgca atcattccag aaattttgtc tgtacgattg 2940 taagaatcta ttataccatt cctcaatctc ttagcttcat acagaccaac cgatgtcaac 3000 cctaaagagc ttcctgtata atctgaaaat ccgttataca aaggtttgtt tctaaataaa 3060 tctaggtatt cgcaacctaa tctgcatttt ataagattat caatagatgg gtgtgcaacg 3120 caattctggt tctctatgca atcattagga ccttctataa caatgttagt gccaaagata 3180 ctttctataa tcgtatcttc ttttacatta cagtaacatt gatctttttc agggcatttt 3240 tcaaatttgc ttgtaaccaa aaacggacag cctggaacat aaaaacatcc acttaaacat 3300 tgggtagttt gagccataga catgggcatt tgagacaaaa tgaccaaacc tattaagatt 3360 tcagtcacaa atttcagcaa actgaagcta agcttagtgt tcactattag atggaaccat 3420 tccatgctag tccacttatg tttgttgtag tcatgatctg tttctttgga caatatggga 3480 cactctgaag aatgttcttt tgaagctttg cttttgttgc agatgcaaat tttagtacat 3540 tcatgtgtga ttatgcacaa attgccacag ttagaacatt taaatggaaa atatttccat 3600 aagcaattta tgagcaacaa aatagggtat gtgatcaagc ctataagatc ataccagaga 3660 aagaggggtt tggttgtctt gtttactaac caccggatag ggaaatagat caacaaagct 3720 atcaatatta atcttatcca agaaaaattg atgcaggctg tttgtttata aatgcttttt 3780 gaatatttga ttatgcaatc tctaactctt ttgtttgttt ttggtatttc agctgatttg 3840 tcaccgcaca agagattgtg ctcaccatct aacatttcct cagtaaaagt gatgcttgct 3900 gatccagaaa aagatatgac cttgtgttcc acatcttcac caggcttttt tatcaaataa 3960 cccatgatct tctcagggct agtgatgcta acagtatagg gattagcaaa gtttgattta 4020 gttattttgc agtcgccaga taacttcaca gtttgcaatg atactgttcc attagtaggg 4080 tacgagttat aagttatagg ataattgtct tgtgtcaggc tttctgaaat gaagaatttt 4140 gccccaactg aaaaatgcct tttgttgtca agtttggtaa tgggaataac tgggacttta 4200 gagaatcttt ttggcagatt taaagaatcg tcacattttt ctaaaccttc tgctgaatca 4260 gaaacacagg aatatatgac accattattt tccacttgat aataaacatt ataagtggat 4320 atccctttta tctcacattt taatgaagaa gtattcaagc agttgttggg aagatccgag 4380 acagagattg ttttttgcgt agttgattca gcaaaaatag ggatggttga ttcttcttct 4440 cgtatctggc gggttccagg agtctgagat tctagcatca gattagttaa agtctccaag 4500 atagccttgc gttgaattga tgcagcagtg ggtacatcat tctcagcaga atcatcataa 4560 acctcaggat ggtctccacg aattatttct actttggcat ctgtggctct gaagatcaag 4620 aatgccaaca agacagaact cagggcaatt gtgaaaagac tcacttttac cactagttct 4680 agtagtttta aaattctcat cctagacgtc tgctcagatt ataatggtta tatgattaat 4740 ttcaagatgt ctggattaag gtttttgttt gcactgattg ctct 4784 //