ID   HM486904; SV 1; linear; genomic RNA; STD; VRL; 1214 BP.
XX
AC   HM486904;
XX
DT   18-DEC-2011 (Rel. 111, Created)
DT   18-DEC-2011 (Rel. 111, Last updated, Version 1)
XX
DE   Sugarcane streak mosaic virus isolate F161 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sugarcane streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Poacevirus.
XX
RN   [1]
RP   1-1214
RA   Wang M., Li W., Huang Y., Ma L., Lu W., Luo Z., Wang X.;
RT   "Molecular Detection and Coat Protein Gene Analysis of Sugarcane Streak
RT   Mosaic Virus in China";
RL   Unpublished.
XX
RN   [2]
RP   1-1214
RA   Wang M., Li W., Huang Y., Ma L., Lu W., Luo Z., Wang X.;
RT   ;
RL   Submitted (10-JUN-2010) to the INSDC.
RL   Yunnan Academy of Agricultural Sciences, Sugarcane Research Institute,
RL   Lingquan East Road 363, Kaiyuan, Yunnan 661600, China
XX
DR   MD5; 22861d229f96b91fdd4f4e87c1cf733e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1214
FT                   /organism="Sugarcane streak mosaic virus"
FT                   /host="Saccharum hybrid cultivar commercial variety F161"
FT                   /isolate="F161"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="leaf"
FT                   /collection_date="1993"
FT                   /db_xref="taxon:53954"
FT   CDS             <1..1144
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G9B5V5"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G9B5V5"
FT                   /protein_id="AEH95774.1"
FT                   /translation="ERIMSILRWNRSFDLESQANKINAAWIESFGYADIMDFVHEYANW
FT                   WSKHTGKEGFLMDIDKVTALYLTDEVRIDPVPTDLLVFHSGEETLVFHATVDGQGTQPP
FT                   QNQSSSPATTSSISSTTTSLAGSQTTGNLSNTVSQTMKSLYVPPLVKSLKTEAKAKQMM
FT                   RYTPPQALISSSAASIRQFNDWANTAAEGYGKTIQQFTDEILPFWIYWCVVNGATEENK
FT                   TKPKWTKAVLNLDGADGTEITVDENGPQVEFEMGPMYRNAKPGIRAIMRHFGELAYKWV
FT                   QFSVRSGKPIIPHNAVKAGLTTPEFYPCCIDFVMVNILSPAEIDVRNQVINARTPRMGK
FT                   PLFRHALRAGGDEDTDLRREDDANYGRTQIGGAHFGRAQH"
FT   mat_peptide     <1..298
FT                   /product="NIb"
FT   mat_peptide     299..1141
FT                   /product="coat protein"
FT   3'UTR           1145..>1214
XX
SQ   Sequence 1214 BP; 370 A; 257 C; 298 G; 289 T; 0 other;
     agaacgaata atgagcatat tgagatggaa tcgttctttt gacctagaga gccaagctaa        60
     taagatcaat gcggcatgga tagaatcttt tggatatgct gacattatgg attttgttca       120
     tgagtacgct aattggtgga gcaagcacac aggaaaggag ggctttctta tggatatcga       180
     taaagtcaca gctctatatc ttactgatga agtgaggatt gacccagtgc ctacggatct       240
     cttagttttc cactcagggg aagaaactct cgtgtttcat gcaacggtcg atggacaagg       300
     aacacagcca cctcagaatc agagtagttc accagcgaca acatcaagca tatcatcaac       360
     aacaacgagt ctagctggta gtcagacaac agggaatttg tctaatacag tctctcagac       420
     catgaaatcc ctgtacgttc cgccattggt gaaatcgctc aaaacagaag ccaaggcaaa       480
     gcagatgatg agatacacac caccacaagc tctcatctct tcatcagccg cctcgatacg       540
     acaattcaat gattgggcga atacagcagc tgaaggatat gggaagacta ttcaacaatt       600
     cacagatgaa atacttccat tctggattta ctggtgtgtc gttaacggag cgacagaaga       660
     gaacaaaacc aagcccaagt ggacaaaagc tgtgttaaat ctggatggag ctgatgggac       720
     agagataact gttgacgaaa atgggcctca agtggagttc gaaatggggc caatgtatag       780
     aaacgccaaa cctggaattc gcgccatcat gagacacttt ggcgaattgg cgtacaagtg       840
     ggttcagttc tcggttcgta gcgggaaacc cataatacca cataatgcag taaaggcagg       900
     attaacaact ccagagtttt atccttgctg cattgatttt gtgatggtga atatcctctc       960
     accagcagaa atagacgtgc gtaaccaggt gattaacgca cgcacacccc ggatgggaaa      1020
     gcctttattc cgtcacgcgc ttagagccgg gggagatgag gacacggacc tgcgtagaga      1080
     agatgatgct aattatggaa ggacgcagat cggaggcgct cattttgggc gcgctcagca      1140
     ctgagcacca gtgccgttat ccatatatta tcgtatttac gtatcaatcg gttctcttgg      1200
     ataggctgat ggta                                                        1214
//