ID   HQ873796; SV 1; linear; genomic RNA; STD; VRL; 730 BP.
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AC   HQ873796;
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DT   14-OCT-2011 (Rel. 110, Created)
DT   14-OCT-2011 (Rel. 110, Last updated, Version 1)
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DE   Onion yellow dwarf virus isolate 200-OYDV1 polyprotein gene, partial cds.
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KW   .
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OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-730
RA   Afunian M., Parrano L., Pagliaccia D., Douhan G., Vidalakis G.;
RT   "Characterization of viruses associated with garlic plants propagated from
RT   aerial and underground reproductive tissues from different geographic
RT   regions";
RL   Unpublished.
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RN   [2]
RP   1-730
RA   Afunian M., Parrano L., Pagliaccia D., Douhan G., Vidalakis G.;
RT   ;
RL   Submitted (12-JAN-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, University of California,
RL   Riverside, Riverside, CA 92521, USA
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DR   MD5; 304ab2ae35cde566ce5e14a32b70d307.
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FH   Key             Location/Qualifiers
FH
FT   source          1..730
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Allium sativum (garlic) cv. Bianco Piacentino"
FT                   /isolate="200-OYDV1"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..>730
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /db_xref="GOA:G4WPB7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G4WPB7"
FT                   /protein_id="AEP81382.1"
FT                   /translation="AGEGEDAAAQSSTLKQIAKQKDKDVDTGTTGKFTIPRIKALSDKM
FT                   RFPKVGKTVVLNAEHLLEYKPDQIELYNTRSTKNQFENWYNAVKKEYDVNDEQMKILLN
FT                   GLMVWCIENGTSPNLSGNWTMMDDEEQVEYPLAPVLDNAKPTFRQIMAHFSDAAEAYIE
FT                   YRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTYKTPKRAKEAHMQMKAAAIRGATNR
FT                   LFGLDGNVNTTEEDTERHTAA"
XX
SQ   Sequence 730 BP; 269 A; 126 C; 168 G; 167 T; 0 other;
     gcgggggaag gagaagatgc agcagcacaa tcaagcacac taaagcaaat tgcaaagcag        60
     aaagataaag atgttgacac tggtacaact ggtaagttca caatccctag aattaaagct       120
     ctatcagata aaatgaggtt tccaaaagtt ggcaaaactg ttgtacttaa tgcagagcac       180
     ttgttggaat acaagccaga tcaaatcgaa ctgtacaaca caagatcaac aaagaatcag       240
     tttgagaatt ggtataatgc ggttaagaaa gagtacgatg tcaatgatga gcaaatgaaa       300
     atattactaa atggtctaat ggtttggtgt attgaaaatg gaacatctcc taatttatcg       360
     ggaaactgga ctatgatgga tgatgaagag caggttgaat atccattggc gccagttctg       420
     gataacgcaa aaccaacctt tagacaaata atggcacatt tcagtgatgc agctgaagca       480
     tacattgaat atagaaatgc cacagaaaaa tacatgcccc ggtatggact tcagcgcaat       540
     ttaacagaac ttagtttggc acgttacgca ttcgattttt atgagatgac ttataaaact       600
     cctaaacgag caaaagaagc acatatgcag atgaaggcgg ctgcgattag aggggcaact       660
     aatcgcttgt ttggcctgga tggtaacgta aacacaacgg aagaggacac ggaaagacac       720
     acagctgcgg                                                              730
//