ID JF502355; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC JF502355; XX DT 29-FEB-2012 (Rel. 111, Created) DT 04-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Cotton leaf curl Burewala virus isolate In:Fazilka:2009 segment DNA A, DE complete sequence. XX KW . XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2759 RX PUBMED; 22307170. RA Rajagopalan P.A., Naik A., Katturi P., Kurulekar M., Kankanallu R.S., RA Anandalakshmi R.; RT "Dominance of resistance-breaking cotton leaf curl Burewala virus (CLCuBuV) RT in northwestern India"; RL Arch. Virol. 157(5):855-868(2012). XX RN [2] RP 1-2759 RA Naik A.S., Katturi P., Rajagopalan P.A., Kankanallu R.S., Anandalakshmi R.; RT ; RL Submitted (05-MAR-2011) to the INSDC. RL Plant-Virus Interactions Lab, Maharashtra Hybrid Seeds Co Ltd, Jalna - RL Aurangabad road, Jalna, Maharashtra 431 203, India XX DR MD5; 02dd152c34b0fc3600deae32112d0667. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Cotton leaf curl Burewala virus" FT /segment="DNA A" FT /host="cotton" FT /isolate="In:Fazilka:2009" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="06-Sep-2009" FT /note="PCR_primers=fwd_name: CBVs-C1For_2533-2569, FT rev_name: CBVs-V1Rev_528-494" FT /db_xref="taxon:620894" FT gene 132..488 FT /gene="V2" FT CDS 132..488 FT /codon_start=1 FT /gene="V2" FT /product="pre coat protein" FT /db_xref="GOA:H6B8R9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H6B8R9" FT /protein_id="AFB83429.1" FT /translation="MWDPLLNEFPDTVHGFRCLLAVKYLQLVEKTYSPDKLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT gene complement(283..807) FT /gene="C5" FT CDS complement(283..807) FT /codon_start=1 FT /gene="C5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:H6B8S0" FT /protein_id="AFB83431.1" FT /translation="MNILHSRRTGLIIKHIKYLSKILRFINRSTISNQEKHPAIRVILR FT LNVLIHPDLTQHITRLNTKFLTNSMGQPSTTSNITNTHYFTYMLNIMSGLQRLNLTWTF FT TSSRNIWTSVHPVHPGLSVHGPVRPCFCFGDADNGGSSTAHIWAVEVETTAYLRSGRGN FT DYICWSLRHNS" FT gene 292..1062 FT /gene="V1" FT CDS 292..1062 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:H6B8S1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H6B8S1" FT /protein_id="AFB83430.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSLESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKKFCVKSGYVLRKIWMDENIKTKNHTNSGMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDKYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQETGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1059..1463) FT /gene="C3" FT CDS complement(1059..1463) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:H6B8S2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H6B8S2" FT /protein_id="AFB83433.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT HTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT gene complement(1505..2596) FT /gene="C1" FT CDS complement(1505..2596) FT /codon_start=1 FT /gene="C1" FT /product="replication associated protein" FT /db_xref="GOA:H6B8S3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H6B8S3" FT /protein_id="AFB83432.1" FT /translation="MAPPKRFKIQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALYAGSKSEALRVIRELAPKGCILQFH FT NLNAILRRIFRSPPAPNISPFSPSSFDQVPERTEVWAIDNVVDVAERPLRPRSIEIEGD FT SRPGKTMWARSLGPYSYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYNEFLNEEKITSLKNWALKNAIFITLEGPL FT YSASNQSTAQGSEETQQEEESRS" FT gene complement(2137..2682) FT /gene="C4" FT CDS complement(2137..2682) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H6B8S4" FT /protein_id="AFB83434.1" FT /translation="MPFGDTINCIQSPIPRVKGHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSARITDS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSKQPTTLT FT PQHFTQAVSQRLLESLGN" XX SQ Sequence 2759 BP; 723 A; 551 C; 649 G; 836 T; 0 other; accggatggc cgcgcgactt ttttgtgggc cctaccatta actctcgtcg gccaatcata 60 gaaagcgctc aaagcttaaa ttatcttccc gcctaatata agtactccgt tgctaagtat 120 gcgttggaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtttgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgataaat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgtcg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcaatcgt tggagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agaaattttg tgttaagtct ggttatgtgt tgcgtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agcgggatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataagtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaaactg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgtgta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagatact aagaacaccc 1500 tcattcaaga tctactctcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtacagt ggtccttcga gagtgatgaa tattgcattt tttaaggccc 1620 aattctttaa tgatgtgatt ttttcctcgt tgaggaattc attataactg ctgttcggac 1680 caggattgca caggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca 1860 ggtccagatg tccgcacaaa tagctatatg gtcccaatga tctagcccac atcgtcttcc 1920 cggggcgact atctccctca atttctatac tccgaggtct aaggggccgc tcagcgacat 1980 cgacaacgtt atcgatggcc caaacttcag ttctttctgg aacctgatcg aaagaagaag 2040 gagaaaaagg agaaatatta ggagccggtg ggctcctgaa gattcttctt agaatggcat 2100 ttaaattatg gaattggagt atacaaccct taggagctag ttccctaatg actctaagag 2160 cctctgactt actgcctgcg taaagtgctg cggcgtaagc gtcgttggct gtttgctgtc 2220 ctcctcttgc tgatcttcca tcgatctgaa actctcccca ctcgagagtg tccccgtcct 2280 tgtcgatgta ggccttgaca tctgagcttg atttagctcc ctgaatgttc ggatggaaat 2340 gtgctgacct ggttggggat accaggtcga agaatctgtt attcgtgcag acgaatttgc 2400 cctcgaactg gatgagcaca tggagatgag ggctcccatc ttcgtgtaac tctctgcaga 2460 gtttgatgta ttttttattc gagggtgtgt tgatggcttg aatttgggaa agtgcttcct 2520 ctttagtgag tgagcactgt ggataagtga tgaaataatt tttggcttgt attttaaaac 2580 gtttgggggg agccattgac tttggtcaat tagagacaac tgatggcctt ttactctggg 2640 aattggagac tggatacaat ttatagtgtc tccaaatggc atattctgta aataactaga 2700 agtttgtttg aaattcaaat tcccctttgg gctccaaaag cggccatccg tataatatt 2759 //