ID JN678805; SV 1; circular; genomic DNA; STD; VRL; 2755 BP. XX AC JN678805; XX DT 29-JAN-2012 (Rel. 111, Created) DT 29-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Cotton leaf curl Burewala virus isolate CLR_13 segment A, complete DE sequence. XX KW . XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2755 RA Kumar J., Roy J.K., Tuli R.; RT "Diversity of begomovirus infecting cotton in India"; RL Unpublished. XX RN [2] RP 1-2755 RA Kumar J., Roy J.K., Tuli R.; RT ; RL Submitted (28-AUG-2011) to the INSDC. RL Agri-Biotechnolgy, National Agri-Food Biotechnolgy Institute, India, C-127, RL Phase-8, Mohali, Punjab 160071, India XX DR MD5; 60a11c41ea12c2ea8bac79c79f315c20. XX FH Key Location/Qualifiers FH FT source 1..2755 FT /organism="Cotton leaf curl Burewala virus" FT /segment="A" FT /isolate="CLR_13" FT /mol_type="genomic DNA" FT /country="India:Sri-Ganganagar" FT /collection_date="Aug-2010" FT /db_xref="taxon:620894" FT gene 132..488 FT /gene="AV2" FT CDS 132..488 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:D3HIQ8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3HIQ8" FT /protein_id="AEY75708.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT gene 292..1062 FT /gene="AV1" FT CDS 292..1062 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D3HIR0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D3HIR0" FT /protein_id="AEY75709.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1059..1463) FT /gene="AC3" FT CDS complement(1059..1463) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:H2E1L5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H2E1L5" FT /protein_id="AEY75710.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIHFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT gene complement(1534..2592) FT /gene="AC1" FT CDS complement(1534..2592) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:H2E1L6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H2E1L6" FT /protein_id="AEY75711.1" FT /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTGSAHFHPNIQGAKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARLLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYTEFLNEEKNTALKNWALKNAIFITLEGPLY FT SASNQSTAQGSE" FT gene complement(2133..2678) FT /gene="AC4" FT CDS complement(2133..2678) FT /codon_start=1 FT /gene="AC4" FT /product="regulatory protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H2E1L7" FT /protein_id="AEY75712.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSAQITDS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLT FT PQHLTQAVSQRLLESLRN" XX SQ Sequence 2755 BP; 719 A; 544 C; 650 G; 842 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcctattata agtacttcgt tgctaagtat 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgatacat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt tagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa gtggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagataat aagaacaccc 1500 gcattcaaga tctactctcc tcctcctgtt gcgttattcg cttccctgtg ctgtactttg 1560 attggaagct gagtacagtg gtccttcgag agtgatgaag attgcatttt ttaaggccca 1620 attctttaat gctgtgtttt tttcctcgtt gaggaattcc gtataactgc tgttcggacc 1680 aggattgcac aggaagattg tcggtatccc gcctttaatt tgaactggct ttccgtattt 1740 tgtgttggac tgccagtctc tttgggcccc catgaactct ttaaagtgta ggaaatgcgg 1800 gtcgacgtca tcaatgacgt tgtaccaggc gtcgttactg tatactttgg gactcaggtc 1860 tagatgtccg cacaaatagt tatgtggtcc caataatcta gcccacatcg tcttccccgt 1920 tcgactatct ccctcaatta ctatactccg aggtctaagg ggccgcgcag cggcatcgac 1980 aacgttatca atggcccaaa cttcaagttc ttctggaact tgatcgaaag aagaaggaga 2040 aaaaggagaa atatagggag ccggtggctc ctgaaagatt ctgtctagat ttgcatttaa 2100 attatgaaat tgtagtacaa aatctttagg agctagttcc ttaatgactc taagagcctc 2160 tgacttactg cctgcgttaa gtgctgcggc gtaagcgtcg ttggctgtct gctgtcctcc 2220 tcttgctgat cttccatcga tctgaaactc tccccactcg agagtgtccc cgtccttgtc 2280 gatgtaggcc ttgacatctg agcttgattt agctccctga atgttcggat ggaaatgtgc 2340 tgacccggtt ggggatacca ggtcgaagaa tctgttattt gtgcagacga atttgccctc 2400 gaactggatg agcacatgga gatgagggct cccatcttcg tgtaactctc tgcagagttt 2460 gatgtatttt ttattcgagg gtgtgttgat ggcttgaatt tgggaaagtg cttcctcttt 2520 agtgagtgag cactgtggat aagtgatgaa ataatttttg gcttgtactt taaaacgttt 2580 ggggggagcc attgactttg gtcaattaga gacaactgat gggcttttac tctgggaatt 2640 ggagactgga tacaatttat agtgtctcca aatggcatat tctgtaaata actagaagtt 2700 cgtttgaaat tcaaattccc ctttgggctc caaaagcggc catccgtata atatt 2755 //