ID JN809823; SV 1; circular; genomic DNA; STD; VRL; 2747 BP. XX AC JN809823; XX DT 16-JAN-2012 (Rel. 111, Created) DT 16-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Ageratum yellow vein virus isolate AFSP7b segment A, complete sequence. XX KW . XX OS Ageratum yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2747 RA Shih S.L., Tsai W.S., Lee L.M., Kenyon L.; RT "First report and molecular characterization of begomoviruses infecting RT Sauropus androgynus in Thailand"; RL Unpublished. XX RN [2] RP 1-2747 RA Shih S.L., Tsai W.S., Lee L.M., Kenyon L.; RT ; RL Submitted (03-OCT-2011) to the INSDC. RL Virology, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, Republic of RL China XX DR MD5; 70fa7cbfa43a9e9d07b5360d8a5c4725. XX FH Key Location/Qualifiers FH FT source 1..2747 FT /organism="Ageratum yellow vein virus" FT /segment="A" FT /host="Sauropus androgynus" FT /isolate="AFSP7b" FT /mol_type="genomic DNA" FT /country="Thailand:Kamphaengsaen" FT /collection_date="2010" FT /db_xref="taxon:44560" FT gene 134..484 FT /gene="V2" FT CDS 134..484 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:H2E6S0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H2E6S0" FT /protein_id="AEX37973.1" FT /translation="MWDPLVNEFPETVHGLRCMLAVKYCQLIEQTYAPDTVGYDLIRDL FT ISVIRARNYVEASRRYSHFNSRLEGTTSSELRHPRDEPCCCPHCPRHQQKKDMDQQAHV FT SQAQILQSVQKP" FT gene 294..1067 FT /gene="V1" FT CDS 294..1067 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:H2E6V1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H2E6V1" FT /protein_id="AEX37970.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNKKRIW FT TNRPMYRKPRFYRVYKSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVIFYLVRYRRPYGSAMDFGQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFTATVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1064..1468) FT /gene="C3" FT CDS complement(1064..1468) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancement protein" FT /db_xref="GOA:H2E6X0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H2E6X0" FT /protein_id="AEX37972.1" FT /translation="MDSRTGELLTATQCESGVYIWTIKNPLYFKITKHHERPFNTNHDI FT ITIQIQFNHNLRKALGIHQCFLNFQIWTRLQPQTWRFLRVFRVQCMKYLDNMGVISINN FT VIRACDHVLWDVLEKTEYVTQSNIIKFNLY" FT gene complement(1209..1616) FT /gene="C2" FT CDS complement(1209..1616) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activation protein" FT /db_xref="GOA:H2E6P3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H2E6P3" FT /protein_id="AEX37971.1" FT /translation="MRNSSPSRSHCTQVPIKVQHRIAKRQPVRRRRVDLTCGCSYYFGI FT DCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTVQPQ FT PEESVGNTPVFSELPDLDSLTTSDLAFLKSI" FT gene complement(1516..2604) FT /gene="C1" FT CDS complement(1516..2604) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:H2E6V4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H2E6V4" FT /protein_id="AEX37969.1" FT /translation="MPRTHQFQVKAKNIFLTYPKCPIPKEQMLELLKNISCPSDKLFIR FT ISQEKHQDGSLHIHALIQFKGKCQFRNPRHFDVTHPNSSTQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSAEAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENIRDAAARPWRPISLVIEGE FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKDWAIKNAEFITITEPL FT YSGTNQSATQNRQETTSSQAES" FT gene complement(2190..2447) FT /gene="C4" FT CDS complement(2190..2447) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H2E6V5" FT /protein_id="AEX37974.1" FT /translation="MGLCISTRSSNSKVNASSETPDISMSLTLIAPPNSTQTSRELSPA FT PMSSPTSRRTVITSTGVSFRSMDDLLEEVNRQLMMQQRRP" XX SQ Sequence 2747 BP; 721 A; 553 C; 597 G; 876 T; 0 other; accggatggc cgcgattttt tttaaagtgg tcccaccact aacaaatgtc ccccaatcag 60 aacgctctct caaagcttaa ttgttttgtg gtcccttatt taaacttgct cagcaagtag 120 ttctccccgc actatgtggg atccattagt aaacgagttt cccgaaactg ttcacggtct 180 taggtgtatg cttgccgtaa aatattgtca gttaatcgaa cagacatacg ctccagatac 240 ggttggttac gatcttatac gagatttaat ttcagtaatt cgtgctcgca attatgtcga 300 agcgtcccgc cgatatagtc atttcaactc ccgcctcgaa ggtacgacgt cgtctgaact 360 tcgacacccc cgtgatgagc cgtgctgctg cccccactgt cctcgtcacc aacaaaaaaa 420 ggatatggac caacaggccc atgtatcgca agcccagatt ctacagagtg tacaaaagcc 480 ctgatgtgcc caaaggttgt gaaggtccat gtaaggtcca atcgtatgaa cagaggcacg 540 acatatccca tgttggtaaa gtattatgtg ttagtgatgt cactcgtggt agtgggctta 600 cccatcgtgt tggtaagaga ttctgtgtga agtccgttta tgtattgggt aagatatgga 660 tggatgaaaa tatcaaaact aagaaccata cgaacactgt gattttttat cttgttcgtt 720 atagaaggcc ctatggttct gctatggatt ttggtcaggt gtttaacatg tatgataatg 780 agcccagtac tgctacaatc aagaatgatc ttcgagatcg ttatcaagtg ttaaggaaat 840 tcactgcaac agtcacaggt ggtcaatatg cttctaagga gcaggcgttg gttaggaaat 900 ttatgaagat taataattat gtagtttata atcatcaaga ggctgctaag tatgacaatc 960 atactgagaa tgccttgtta ttgtatatgg cttgtactca tgccagtaat ccagtgtatg 1020 ctactttgaa gatcagaatc tatttttatg attctgttca gaattaataa agattgaatt 1080 ttattatatt agattgtgtt acatattctg ttttttccaa tacatcccat aatacatgat 1140 cacatgctct aattacattg ttaatactaa ttacacccat attatctaaa tatttcatac 1200 attgaaccct aaatactctt aagaaacgcc aagtctgagg ttgtaagcga gtccagatct 1260 ggaagttcag aaaacactgg tgtattccca acgctttcct caggttgtgg ttgaactgta 1320 tttggatcgt tatgatgtcg tggttggtgt tgaatggtct ctcgtggtgc ttggttatct 1380 tgaaatatag gggatttttg atcgtccaga tatacacgcc actctcgcat tgagttgcag 1440 tgagtaattc ccctgtgcga gaatccatga ttggcgcagt ctatgccgaa gtagtatgag 1500 cacccgcacg ttagatcaac tctccgcctg cgaactggtt gtctcttggc gattctgtgt 1560 tgcactttga ttggtacctg agtacaatgg ctccgtgatg gtgatgaatt ccgcattctt 1620 tattgcccag tcttttaatg ctgaattctt ttcctcgtcc aagtactctt tatatgatga 1680 tgttggccct ggattgcaaa ggaagatagt tgggattcca cctttaattt gaattggttt 1740 cccgtacttt gtgttgcttt gccagtccct ttgggccccc atgaattctt taaagtgttt 1800 tagatagtgg gggtctacgt catcaatgac gttgtaccag gcatcattac tgtacacctt 1860 tggactcaag tcaaggtgac cgcacagata attatgtgga cctaaggacc tggcccacat 1920 ggtctttcct gtcctacttt ctccctcaat gactaaactt atgggcctcc aaggccgcgc 1980 agcggcatcc cttatattct cggaaaccca ttcttcaagt tcttctggaa cttgatcgaa 2040 agaagaagat aaaaaaggag aaacataaac ctccaacgga ggtgtaaaaa tcctatctaa 2100 attacatttt aaattatgat attgaaaaat aaaatctttt gggagttttt cccttattat 2160 tgctaacgcc gcttcagccg aacctgcatt tagggcctcc gctgctgcat cattagctgt 2220 ctgttgacct cctctagcag atcgtccatc gatctgaaac tgaccccagt cgatgtaatc 2280 accgtccttc tcgatgtagg acttgacatc ggagctggac ttagctccct ggaagtttgg 2340 gtggaattgg gtggagctat tagggtgagt gacatcgaaa tgtctggggt ttctgaactg 2400 gcatttacct ttgaattgga tgagcgcgtg gatatgcaga gacccatctt ggtgtttttc 2460 ttgtgatatt ctgataaata atttgtcaga tggacatgaa atgtttttaa ggagttcgag 2520 catttgctct tttggtattg ggcattttgg gtaagtgaga aagatatttt tggccttaac 2580 ttggaattgg tgtgtacgtg gcatattgaa tcgggtgctc tacaaacttc ataggaatgg 2640 ggtgctttgg gtgcctattt atatcgagct cccaaatggc aattttgtaa ttacgaaaag 2700 taatttaaaa tccttacgct cccaaaagcg gccatccgta taatatt 2747 //