ID   JQ288895; SV 1; linear; genomic RNA; STD; VRL; 3012 BP.
XX
AC   JQ288895;
XX
DT   01-APR-2012 (Rel. 112, Created)
DT   27-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Olive mild mosaic virus RNA-dependent RNA polymerase and p23 genes, partial
DE   cds; p52, p8, and p6 genes, complete cds; and coat protein gene, partial
DE   cds.
XX
KW   .
XX
OS   Olive mild mosaic virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphanecrovirus.
XX
RN   [1]
RP   1-3012
RX   DOI; .1094/PDIS-03-12-0273-PDN.
RX   PUBMED; 30727072.
RA   Gratsia M.E., Kyriakopoulou P.E., Voloudakis A.E., Fasseas C.,
RA   Tzanetakis I.E.;
RT   "First Report of Olive mild mosaic virus and Sowbane mosaic virus in
RT   Spinach in Greece";
RL   Plant Dis. 96(8):1230-1230(2012).
XX
RN   [2]
RP   1-3012
RA   Gratsia M., Tzanetakis I.E.;
RT   ;
RL   Submitted (15-DEC-2011) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495. N. Park Creek Dr.,
RL   Fayetteville, AR 72703, USA
XX
DR   MD5; 1db85932ce33a9f2cdf7c8ce2b1aa0fc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3012
FT                   /organism="Olive mild mosaic virus"
FT                   /host="Spinacia oleracea cv. Spinaker"
FT                   /mol_type="genomic RNA"
FT                   /country="Greece"
FT                   /collected_by="P.E. Kyriakopoulou"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:295090"
FT   CDS             <1..1605
FT                   /codon_start=1
FT                   /transl_except=(pos:37..39,aa:OTHER)
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="read-through stop codon"
FT                   /db_xref="GOA:H9NET9"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:H9NET9"
FT                   /protein_id="AFF57920.1"
FT                   /translation="IGSQVGLAFRAKXGCLERRPGFSTSVSRGDHPDLVVKPSGHPEKQ
FT                   RQLLRYSGIGGHLLIGIHNNSLSNLRRGLMERVFYVEGPNGLQDAPKPDKGAFNSLAKF
FT                   RDLYTKNSWRHSPVTNEQFLMNYSGRKLTIYKEAVDSLSHQPLSLRDARLKTFVKAEKL
FT                   NLSKKPDPAPRVIQPRSPRYNVCLGRYLRHYEHHAFKTIAKCFGEITVFKGYTLEQQGE
FT                   IMHCKWKKYVNPVAVGLDASRFDQHVSKEALEYEHEFYLRDYPNDKQLKWLLKQQLCNA
FT                   GTAFASDGIIKYKKEGCRMSGDMNTSLGNCILMCAMVYGLKDHLGIELSLANNGDDCVI
FT                   VCEKADLLKLTSSIEPYFKKFGFKMEVEKPVDIFERIEICQTQPVFDGTQYIMVRKPSV
FT                   VTSKDVTSLIPCQTQAQYAEWLQAVGECGMSINGGIPVMQNFYTMLQTGVKRTKFTKTG
FT                   EFQTNGLGYHSRYMHRVARTPSPETRLSFYLAFGITPDLQEALEVFYDTSTLELDDVIP
FT                   ADTYQVSGEHLINGLPN"
FT   CDS             <1..39
FT                   /codon_start=1
FT                   /product="p23"
FT                   /db_xref="UniProtKB/TrEMBL:H9NEU4"
FT                   /protein_id="AFF57925.1"
FT                   /translation="IGSQVGLAFRAK"
FT   CDS             223..1605
FT                   /codon_start=1
FT                   /product="p52"
FT                   /db_xref="GOA:H9NEU3"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:H9NEU3"
FT                   /protein_id="AFF57924.1"
FT                   /translation="MERVFYVEGPNGLQDAPKPDKGAFNSLAKFRDLYTKNSWRHSPVT
FT                   NEQFLMNYSGRKLTIYKEAVDSLSHQPLSLRDARLKTFVKAEKLNLSKKPDPAPRVIQP
FT                   RSPRYNVCLGRYLRHYEHHAFKTIAKCFGEITVFKGYTLEQQGEIMHCKWKKYVNPVAV
FT                   GLDASRFDQHVSKEALEYEHEFYLRDYPNDKQLKWLLKQQLCNAGTAFASDGIIKYKKE
FT                   GCRMSGDMNTSLGNCILMCAMVYGLKDHLGIELSLANNGDDCVIVCEKADLLKLTSSIE
FT                   PYFKKFGFKMEVEKPVDIFERIEICQTQPVFDGTQYIMVRKPSVVTSKDVTSLIPCQTQ
FT                   AQYAEWLQAVGECGMSINGGIPVMQNFYTMLQTGVKRTKFTKTGEFQTNGLGYHSRYMH
FT                   RVARTPSPETRLSFYLAFGITPDLQEALEVFYDTSTLELDDVIPADTYQVSGEHLINGL
FT                   PN"
FT   CDS             1589..1810
FT                   /codon_start=1
FT                   /product="p8"
FT                   /db_xref="GOA:H9NEU0"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:H9NEU0"
FT                   /protein_id="AFF57921.1"
FT                   /translation="MDYQTDVNEDNVSVSGRARRGTGDKRHNGSGMSGVKRHAVSETAQ
FT                   KSQQGTGNGTMTNIAEEQTITVTYNFNF"
FT   CDS             1814..1984
FT                   /codon_start=1
FT                   /product="p6"
FT                   /db_xref="GOA:H9NEU1"
FT                   /db_xref="UniProtKB/TrEMBL:H9NEU1"
FT                   /protein_id="AFF57922.1"
FT                   /translation="MAGCRCCDTSPGITLFPYFAILILILAILVVGTPNQQYHHSPSTY
FT                   EYKTQHISIAK"
FT   gap             2006..2552
FT                   /estimated_length=547
FT   CDS             <2553..2817
FT                   /codon_start=2
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9NEU2"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:H9NEU2"
FT                   /protein_id="AFF57923.1"
FT                   /translation="ASAFNSNSSGGESLVSTLDTNRVDKKWYSTIGNAAFTALTSIDKN
FT                   QFCPATALIAGDGGPALATAVGDVFMRYEIEFIEPINPTINV"
XX
SQ   Sequence 3012 BP; 694 A; 564 C; 603 G; 604 T; 547 other;
     attggatccc aagtcggctt ggcctttcgg gccaaatagg ggtgcctaga gaggaggcca        60
     gggttctcca cgtccgtctc gcgtggagat caccctgatc tggtggtcaa accatcagga       120
     caccccgaga aacagcgcca gttgttgcgc tatagtggaa ttggcggcca tttattaatc       180
     ggcatccaca acaactctct ttccaatttg cgccggggct taatggaaag agtattttac       240
     gtcgaagggc ccaacggcct ccaagacgcc ccgaaacccg acaagggggc tttcaactcc       300
     cttgctaagt ttagagatct ctatactaaa aatagttggc gtcattcccc tgtaaccaat       360
     gagcaatttt tgatgaatta ctcgggcagg aaactgacta tttacaagga agcggttgat       420
     agtttgtcgc atcaaccact aagcctaaga gatgctcggc tgaagacatt cgtaaaggcg       480
     gaaaaattaa atctgagcaa aaagccagat ccagcaccga gggtcattca gcctcggtca       540
     ccccgctaca acgtttgttt gggtcgttac cttcgtcatt atgaacacca cgcgttcaaa       600
     accattgcta aatgctttgg ggaaatcacg gtctttaagg gttacactct cgagcaacaa       660
     ggtgagatca tgcactgcaa gtggaagaaa tatgttaatc ccgtcgcggt cggactcgat       720
     gccagtcggt tcgaccaaca cgtgtctaaa gaagcacttg aatatgagca tgaattttat       780
     ttgagagatt atcccaatga taaacagctc aaatggttgc ttaagcaaca attgtgcaat       840
     gccggtacgg cttttgctag tgatggaatc atcaagtaca agaaggaggg atgtagaatg       900
     agtggagaca tgaacacgag tttgggtaat tgcattttaa tgtgtgccat ggtctacggg       960
     ttgaaggacc acctaggaat cgaattatcg ttagccaata atggggatga ctgcgtcatt      1020
     gtctgtgaga aagcggattt attaaagttg acgagcagca tcgaaccata tttcaagaaa      1080
     ttcggattca agatggaggt ggagaaaccc gttgatattt tcgagcgcat tgaaatttgc      1140
     caaacccagc ctgtgttcga tggaacccaa tacatcatgg ttaggaaacc ctctgttgtc      1200
     acgtccaagg acgtcactag tttaatccca tgccaaacac aagcacaata tgcagaatgg      1260
     ctgcaagctg taggtgagtg cggaatgagc atcaatggtg gaattcctgt tatgcagaat      1320
     ttctacacca tgctgcaaac tggcgttaag cgcacaaagt tcaccaagac cggcgagttc      1380
     cagacgaacg ggctggggta tcactctcga tatatgcaca gagtggcccg aactccttcg      1440
     cctgaaaccc gtttatcctt ttacctagcg ttcggtatca caccagacct ccaggaagct      1500
     ttggaggtct tctatgatac cagtacgcta gaattggatg atgttatccc agctgataca      1560
     taccaagtat caggagagca tttaatcaat ggattaccaa actgatgtta acgaagataa      1620
     cgtgagcgta agcggtcggg ctaggagagg cactggggat aagagacaca atggttcggg      1680
     aatgtctggc gttaagcgtc atgcggtgag tgaaacagct cagaaatcgc agcaaggtac      1740
     tggcaatggc acaatgacca acatagctga agaacagacc attaccgtga catacaactt      1800
     taacttttaa gttatggctg gctgtcgctg ctgtgatact tcaccaggta ttacattatt      1860
     cccttacttt gctatcttaa ttctcatcct tgcaatctta gttgttggca ctccaaacca      1920
     gcaatatcat cattctccta gtacttacga gtataagact caacacattt cgatcgccaa      1980
     gtagacattt actttaacac caaaannnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2040
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2100
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2160
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2220
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2280
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2340
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2400
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2460
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      2520
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nncgcctctg catttaatag taacagctct      2580
     ggaggggaat cgctagtgtc cactttggac accaatcgcg tcgacaagaa atggtacagc      2640
     accataggaa acgcggcatt caccgcgttg acatcaatcg acaagaacca attttgtcca      2700
     gctacggccc tcattgccgg agatggcgga cctgctcttg ccacagctgt gggcgatgtt      2760
     tttatgcggt acgagattga gttcattgaa ccaatcaacc ccaccataaa tgtttgagtg      2820
     ttagttaact ggcttaaacc ctaagggtac aaatgtgggc ggtaagcaag agggatcctg      2880
     ggaaacaggc ttcgacgggc tgggggtggt gccccggccg acgcatcact tgctgataca      2940
     accactagac acctatgggc gggtctagcc aggtctccac gccatgatca actggaaacg      3000
     gtgagagggg gg                                                          3012
//