ID JQ807998; SV 1; linear; genomic RNA; STD; VRL; 4034 BP. XX AC JQ807998; XX DT 11-JUN-2012 (Rel. 113, Created) DT 11-JUN-2012 (Rel. 113, Last updated, Version 1) XX DE Japanese iris necrotic ring virus isolate Marijiniup10, complete genome. XX KW . XX OS Japanese iris necrotic ring virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Betacarmovirus. XX RN [1] RP 1-4034 RA Wylie S.J., Li H., Jones M.G.K.; RT "First report of an isolate of Japanese iris necrotic ring virus from RT Australia"; RL Australas. Plant Dis. Notes 0:0(2012). XX RN [2] RP 1-4034 RA Wylie S.J., Li H., Jones M.G.K.; RT ; RL Submitted (22-MAR-2012) to the INSDC. RL Plant Virology, WA State Agricultural Biotechnology Centre, Murdoch RL University, South Street, Perth, WA 6150, Australia XX DR MD5; 7476ece51d9e8e8aff0629805e819ebf. DR EuropePMC; PMC5877448; 29607262. XX FH Key Location/Qualifiers FH FT source 1..4034 FT /organism="Japanese iris necrotic ring virus" FT /host="Iris ensata" FT /isolate="Marijiniup10" FT /mol_type="genomic RNA" FT /country="Australia" FT /collected_by="Stephen Wylie, Hua Li" FT /collection_date="Aug-2011" FT /db_xref="taxon:77344" FT 5'UTR 1..13 FT CDS 14..2302 FT /codon_start=1 FT /transl_except=(pos:746..748,aa:OTHER) FT /product="P85" FT /note="read-through protein" FT /db_xref="GOA:I3XIG8" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:I3XIG8" FT /protein_id="AFL55711.1" FT /translation="MYWFEELALWVLDSRFVPLPIGVIGGAVVICNVATREAAIEAVST FT GITNLIDHVAGALSVGINPLDECKSLLKVVPLHPSMDSLLKNPVLSEDPEECLEVIQAD FT EKSVKKRVNRHSRGTFASHAAIACKMHFGVVPLPTRANLTVATRFVANYCQERHVVPAH FT ARGICDAAIPLIFTPDRGDIGVMAALNHRESQIRRVAVREASNLCTPSMELVQNPFCGS FT AWRRMGRVLVGYEDYTSFQFSKXGGLREMGGVETSVSRGTHPQLTVSREKPASKVRKIY FT QVTGLDSGLNFGVHNNSINNLRRGLIERVFFVESNGILKPPLKPKVHIFMNLRYFRRRL FT CHIVGPYTPIEREEYPLLYQGRRKAIYQNALESLSDRPCTRKDAKLKTFVKAEKINFTF FT KGDPAPRVIQPRDPRYNIEVGKYLKKCEHHIYHAIDTIWGGPTVLKGYTVEQLGNNIAE FT TWNQFQRPCAVGFDAKRFDQHVSVDALRFEHSVYNEIFHSSELARLLSYQLLNCGVAVA FT SDGFAKYKVDGCRMSGDINTALGNCLLSCAITHYLCRGIKCRLINNGDDCVLFFEESDL FT TLVNDRLTKWSDFGFSVKFEEPVYELEKVEFCQMQPVWCNGWVMTRNPYICTSKDTYSI FT TPWHNSASALKWVASVGECGLSLSGGIPVLQSFYSCMMGLSEQRMNIKNDVWFSDSGFA FT RLAASGRRTKTHILEETRVSFWRAFGILPDAQTSIEAVYDEYENNGVFGAGGINSELWT FT SLLKPLHTI" FT CDS 14..748 FT /codon_start=1 FT /product="P27" FT /note="replication-related protein" FT /db_xref="UniProtKB/TrEMBL:I3XIG7" FT /protein_id="AFL55710.1" FT /translation="MYWFEELALWVLDSRFVPLPIGVIGGAVVICNVATREAAIEAVST FT GITNLIDHVAGALSVGINPLDECKSLLKVVPLHPSMDSLLKNPVLSEDPEECLEVIQAD FT EKSVKKRVNRHSRGTFASHAAIACKMHFGVVPLPTRANLTVATRFVANYCQERHVVPAH FT ARGICDAAIPLIFTPDRGDIGVMAALNHRESQIRRVAVREASNLCTPSMELVQNPFCGS FT AWRRMGRVLVGYEDYTSFQFSK" FT CDS 2266..2496 FT /codon_start=1 FT /product="P8" FT /note="movement-related protein" FT /db_xref="GOA:I3XIG9" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:I3XIG9" FT /protein_id="AFL55712.1" FT /translation="MDVSSQTTTYDLDPIDSDIPQVKRELSNGRGAQATKRAVARDTAL FT SATRNVTGREVVGGVWTQVAETINNTNHFHF" FT CDS 2348..2677 FT /codon_start=1 FT /product="P12" FT /note="movement-related protein" FT /db_xref="GOA:I3XIH0" FT /db_xref="UniProtKB/TrEMBL:I3XIH0" FT /protein_id="AFL55713.1" FT /translation="MAGALRRLRGLSLGILRCLRLVMLLVGKLLVVFGHKWPKQSTTRT FT ISISEPLWDNDILIILVLALSFTLIYIFAQQQPIYHHYHTDNNLKTQYITIGTESSKKT FT EQNGA" FT CDS 2667..3725 FT /codon_start=1 FT /product="P37" FT /note="coat protein" FT /db_xref="GOA:I3XIH1" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:I3XIH1" FT /protein_id="AFL55714.1" FT /translation="MALKDERKVKQLAASGVAWAQKLLSGGGWKTLTTPQKKMARQTLG FT MPQAPVAQTGLRVNRVSQPIATASRVKTGEPRVANAKRSMTVTFSEMIGVVKGSSEFQA FT QSWVINPSDVSTFPQLSVSAAMYEKYRFTQLAFRFAPSCPTTTGGVVVMVHDIDSCDDL FT PTDPTMLYEYSGAMRTSSFSPGRLTIPCDGIPRFISDDHSSDPKLIDFGKLVVASYGQG FT ASDPDMVGEIFIEYTCVLIDRQPAALSTQVVSATSNVGPRFTVTMVQGKESPYVLTYTF FT NCGGSFVVSIFYPVSPVYGITSGTASVGTPLGTGLGGEAQIAVVRSPHRGGTITVGLNS FT QSDIPTAFVTRA" FT 3'UTR 3726..4019 XX SQ Sequence 4034 BP; 1052 A; 896 C; 1051 G; 1035 T; 0 other; atttggatta cccatgtatt ggttcgagga gttagctctg tgggtgctgg actcgcgctt 60 cgtcccacta cctatcggtg tcattggagg ggccgtggtt atatgcaacg tcgcaacgcg 120 tgaagcagcg attgaagccg tttccactgg aatcaccaat ctcatcgacc acgtagcggg 180 ggcattgagc gtgggtataa atcccttaga tgaatgcaaa agcttgctta aagtcgttcc 240 actacaccca agcatggatt ctttattgaa gaatccagtg ctcagcgaag accctgagga 300 atgtttagaa gtcattcaag ccgatgagaa atcggtgaag aaaagagtga acaggcactc 360 tcgtggcacg tttgcctccc acgcagccat tgcctgcaaa atgcattttg gagttgtccc 420 cttgcctaca cgagccaact taacggtggc cactaggttc gtggccaatt actgtcaaga 480 gaggcatgtg gtgccagccc acgcacgagg catttgcgac gctgccatcc cgctaatatt 540 cacccctgat aggggtgaca ttggggttat ggcagctttg aatcatagag aaagccaaat 600 acgtagggtg gcggtgcggg aagcttccaa cttatgcacc cctagcatgg agttggtgca 660 gaacccattt tgtgggtctg cttggagaag gatggggcgt gtcctcgttg ggtacgagga 720 ttacacctca ttccagttct cgaaataggg gggtctccgg gagatggggg gggtagagac 780 gtcagtctct agaggcaccc atccccaact taccgtctct cgggaaaaac cagcctcaaa 840 agtgcggaag atttaccaag ttaccgggct cgacagtggt ttaaacttcg gtgtacacaa 900 caatagcatc aacaatttgc gccgtggtct aattgaaaga gtattctttg tcgagtcaaa 960 tggtattttg aaaccaccgc tgaaaccaaa ggtgcacatt ttcatgaatc tgagatactt 1020 tcgacggcga ttgtgtcata tcgttggacc gtataccccg atcgagaggg aggaataccc 1080 tctcttgtat cagggcaggc gcaaagcgat ttaccaaaac gcattagaaa gtttatcgga 1140 taggccttgc acaaggaagg acgccaagtt gaagactttt gtgaaagcgg aaaaaataaa 1200 ttttaccttt aagggtgacc cagcccctcg agtcatacag cctagagatc ctaggtataa 1260 catcgaggtg ggcaagtacc tgaagaagtg tgagcatcat atctatcacg caattgacac 1320 aatttgggga ggaccgactg ttttgaaagg ttatacggta gagcagcttg gaaacaacat 1380 tgctgagacc tggaaccaat tccagagacc ttgtgctgta gggtttgacg ccaaaagatt 1440 tgaccagcac gtttctgtag atgccttgag atttgagcat tctgtctaca atgagatttt 1500 tcacagtagt gaacttgcta ggttgctctc gtatcagctg cttaattgcg gcgttgcggt 1560 agcgtctgat gggtttgcta aatacaaggt tgatggatgt agaatgagtg gagacattaa 1620 cactgccctg gggaattgct tactaagttg tgccataact cattatttgt gtaggggcat 1680 taagtgcagg ttgatcaaca acggagacga ctgtgttcta ttctttgagg agagtgattt 1740 gacccttgtc aatgatcgtt tgacaaaatg gtccgatttt ggcttctcgg taaagtttga 1800 ggaaccagtc tatgaactag agaaggttga attctgccag atgcagcccg tttggtgcaa 1860 cggttgggta atgaccagga acccttacat ttgtacatcc aaagatactt acagtatcac 1920 gccatggcac aattcagcta gcgcccttaa gtgggtggct tctgtgggcg agtgtggact 1980 atctttgagt gggggcatac cagttcttca gagtttttat agctgtatga tgggattgag 2040 tgaacaaagg atgaacatca agaatgatgt gtggttttca gatagtggat ttgccagatt 2100 ggctgctagt ggtcgtcgca ctaaaacaca cattttggag gaaacaagag tttctttttg 2160 gagggcattc ggtatcttac cggatgcgca gacctccatc gaggccgtct atgacgagta 2220 cgaaaataat ggagtatttg gtgcgggggg tataaacagc gaattatgga cgtctcttct 2280 caaaccacta catacgatct agatcctatt gatagtgata taccacaggt taaacgagag 2340 ttgagtaatg gcaggggcgc tcaggcgact aagagggctg tcgctaggga tactgcgttg 2400 tctgcgactc gtaatgttac tggtcgggaa gttgttggtg gtgtttggac acaagtggcc 2460 gaaacaatca acaacacgaa ccatttccat ttctgagccc ctctgggata acgatatact 2520 catcatactg gtattagcac tatcgttcac tttgatatat atattcgctc aacaacaacc 2580 aatctaccat cactaccaca ccgacaacaa cttgaaaacg cagtatatta caattggcac 2640 tgagagctcg aagaaaactg aacagaatgg cgcttaaaga tgagagaaag gtgaagcaat 2700 tggcagcgtc gggggttgca tgggcacaga aacttctcag tggtggtggg tggaaaacac 2760 tcactactcc tcagaagaag atggcccggc aaactcttgg catgccccaa gctcctgtcg 2820 ctcaaactgg gctccgagtt aatcgcgtct cccaacctat agctactgcg tctagagtga 2880 agactgggga accaagggtt gcgaatgcaa agcgtagcat gaccgttact ttttctgaga 2940 tgattggggt agtgaagggg tcgtctgagt ttcaggccca atcttgggtc ataaatccca 3000 gtgacgtttc tacttttcct caactctctg tttctgcggc tatgtatgag aaatacaggt 3060 tcacccaact cgcgtttcgg tttgctccga gttgccctac gaccactgga ggggtcgtgg 3120 tcatggtcca cgacatagat tcttgcgatg atctaccaac cgaccctacc atgctatatg 3180 agtattcagg ggctatgcgt actagttcat tctcccctgg gcggttgacc atcccatgtg 3240 atgggatccc caggttcatt tctgacgacc actctagtga tccaaagctg atcgattttg 3300 gaaagctagt ggtcgctagc tatggacaag gagcatctga ccctgacatg gttggtgaga 3360 ttttcataga atacacttgc gtgctgatcg atcggcagcc cgctgccttg agcacgcaag 3420 tggtatcagc aacatcaaat gtgggaccaa gattcaccgt gactatggtc caaggcaagg 3480 agtcaccata tgtattaacc tacaccttca actgtggcgg cagttttgtc gtttctatct 3540 tctatcctgt gtcaccagtc tacggcatca ctagtggcac agctagtgtt ggtacacctt 3600 taggcacagg actaggggga gaagcacaaa ttgcagttgt ccgatcacca cacagaggtg 3660 gcactatcac tgtgggcctc aactcccaat cagacatacc caccgccttt gtgacccgcg 3720 cctaagccgg acttacccat ctttctctac gggacatcaa tgccctctgg tatagtagcc 3780 agttgtgacc tcgtgtgaat acgccccaac ttagttggat tctcacgtgc attgggggag 3840 aaacaggggt aggaagggtt ataggctccg cttggtggag gtcgagaatc ttgtagcgga 3900 ggttctgacc agttggatgt cccgacgcat aaaatccagg atttatcctg gtgggcttgc 3960 tagggaaacg ctacaaacaa aactacccca aactgttgta aggcagtttg ggggggccca 4020 aaaaaaaaaa aaaa 4034 //