ID JX678967; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC JX678967; XX DT 16-OCT-2012 (Rel. 114, Created) DT 28-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Bhendi yellow vein mosaic virus isolate WTHOK6, complete genome. XX KW . XX OS Bhendi yellow vein mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RX DOI; .1094/PDIS-09-12-0847-PDN. RX PUBMED; 30722339. RA Tsai W.S., Shih S.L., Lee L.M., Wang J.T., Duangsong U., Kenyon L.; RT "First Report of Bhendi yellow vein mosaic virus Associated with Yellow RT Vein Mosaic of Okra (Abelmoschus esculentus) in Thailand"; RL Plant Dis. 97(2):291-291(2013). XX RN [2] RP 1-2740 RA Tsai W.S., Shih S.L., Lee L.M., Wang J.T., Duangsong U., Kenyon L.; RT ; RL Submitted (10-SEP-2012) to the INSDC. RL Virology, AVRDC-The World Vegetable Center, P.O. Box 42, Shanhua, Tainan RL 74199, Taiwan, R.O.C. XX DR MD5; ea7906e39284743c5487dd274eaf1646. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Bhendi yellow vein mosaic virus" FT /host="okra" FT /isolate="WTHOK6" FT /mol_type="genomic DNA" FT /country="Thailand:Nakhon Pathom" FT /collection_date="2010" FT /db_xref="taxon:120168" FT gene 121..486 FT /gene="V2" FT CDS 121..486 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:K4JFJ0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:K4JFJ0" FT /protein_id="AFU83193.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYDLIRDL FT ICILRSRNYVEASCRYRHFYARVESTSASELRQPIHQPCCCSHCPRHKTTGMDKQAYEQ FT EAQNLSDVQKSGCSKGL" FT gene 281..1051 FT /gene="V1" FT CDS 281..1051 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:K4JJ71" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:K4JJ71" FT /protein_id="AFU83192.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRVAAPIVRVTKQQAWT FT NRPMNRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPTGTPQDFGEVFNMFDNEP FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1054..1458) FT /gene="C3" FT CDS complement(1054..1458) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:K4JVS4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K4JVS4" FT /protein_id="AFU83196.1" FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI FT ITMRIHFNYNLRKALGIHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVINQTMYVDQYSDIKFKLY" FT gene complement(1151..1603) FT /gene="C2" FT CDS complement(1151..1603) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:K4JFX5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K4JFX5" FT /protein_id="AFU83195.1" FT /translation="MQHSSFSPNRCTRVPIKVQHRETKRRIRRRRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHHNNEDPFQLQP FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSTQVSQQSRCNLN" FT gene complement(1500..2588) FT /gene="C1" FT CDS complement(1500..2588) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:K4JHU9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K4JHU9" FT /protein_id="AFU83194.1" FT /translation="MPSKRFQIYSKNYFLTYPKCSLTKEEALSQIQNLHTPTNKKFIKI FT CRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSVHFHPNIQGAKSSSDVKSYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFHN FT LNANLDRIFTPPLEVYVSPFLSSSFDQVPGQLEEWVSENVMDAAARPLRPLSLVLEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPLY FT SGTNQSTAQGNEETHQEEESRS" FT gene complement(2132..2434) FT /gene="C4" FT CDS complement(2132..2434) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K4JVR9" FT /protein_id="AFU83197.1" FT /translation="MGNLICTCSSSSRANTSARISDSSTWSPQAGQYISIRTFRELNQA FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSKQPTTLTPQHLTQAVSQRLLESLGS" XX SQ Sequence 2740 BP; 721 A; 549 C; 642 G; 828 T; 0 other; accggatggc cgcgcgattt tttaaagtgg tgggtccaga acgcacgacg ttgcagactc 60 aaagcttaga taacgctcct tcggctataa gtacgtgcgc actaagtttc aattcaaaaa 120 atgtgggatc cactattaaa cgaatttccg gatacggttc acgggtttcg ttgtatgcta 180 tctgtaaaat atttgcaact tttgtcgcag gattattctc cagatacgct tgggtacgat 240 ttaatacggg atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga 300 tatcgtcatt tctacgcccg cgtcgaaagt acgtcggcgt ctgaacttcg gcagcccata 360 caccagccgt gttgctgctc ccattgtccg cgtcacaaaa caacaggcat ggacaaacag 420 gcctatgaac aggaagccca gaatttatcg gatgtacaga agtccggatg ttccaaaggg 480 ttgtgagggt ccctgtaagg tacaatcctt tgagtctaga cacgatgttg tccatattgg 540 taaggtaatg tgtatttctg atgttacgcg tggagtcggt ttgacccatc gtataggtaa 600 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg agaacatcaa 660 gaccaagaat cacacgaaca gtgtcatttt tttccttgtc cgtgatcgac gtcctactgg 720 gacccctcag gattttggag aggtttttaa catgtttgac aacgaaccca gtacggcgac 780 cgtgaagaat agtcataggg atcgttacca ggtgttgagg aaatggcatg cgaccgtcac 840 gggtggtcaa tatgcgagta aggaacaagc gttggtcaag aagtttgtca gggttaacaa 900 ttatgttgtt tacaatcaac aggaagcagg aaaatacgag aatcatacgg agaatgcgtt 960 aatgctttat atggcttgta cccatgctag taacccagtg tatgctacgc ttaagattcg 1020 tatttatttt tatgactctg taacgaattg aaattaataa agtttgaatt ttatatctga 1080 atattggtct acatacattg tttgattaat tacattgtac aatacatgtt caacggcttt 1140 aataactaaa ttaattgaga ttacacctag attgttgaga tacttgagta cttgggtttt 1200 gaataccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagattc ggaaggttag 1260 aaaacacttg tgtattccca gagctttccg taggttgtag ttgaaatgga tcctcattgt 1320 tatgatgtcc atgttcgtcg tgaatggacg gttgtcgtgg ttgaggatct tgaaatagag 1380 gggatttgga accttccaga tatagacgcc attctttgct tgagctgcag tgatgcgtgc 1440 ccctgtgcga gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt 1500 caagatctac tctcctcctc ctgatgcgtc tcttcgtttc cctgtgctgt actttgattg 1560 gtacccgagt acaacggttc ggtgagaaag acgaatgctg cattttttaa agcccacgct 1620 ttcaaagctg agttcttttc ctcgtccaag aactctttat agcttgcgtt ggggcctgga 1680 ttgcatagga agattgttgg aatgccgcct ttaatttgaa ctggcttccc gtacttggtg 1740 tttgattgcc agtccctttg ggcccccatg aattctttaa agtgtttcag ataatgcggg 1800 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg gcttagatct 1860 aggtgaccac acaaatagtt atgtgggcct aatgacctag cccacatcgt tttgcccgta 1920 cgactgtctc cctctaagac taaactcaaa ggacgcagag gccgcgcagc ggcgtccatg 1980 acgttttccg atacccattc ctcaagttgt cctggaactt gatcgaaaga agaagataaa 2040 aaaggagaaa cataaacctc caagggaggt gtaaaaatcc tatctaaatt ggcgtttaaa 2100 ttatgaaatt gtaatacata atccttaggt gctaactccc taatgactct aagagcctct 2160 gacttactgc ctgcgttaag tgctgcggcg taagcgtcgt tggctgtttg ctgtccccct 2220 cttgcagatc gtccatcgat ctgaaactct ccccattcga gggtgtctcc gtccttgtcg 2280 atgtaggact tgacatctga gcttgattta gctccctgaa tgttcggatg gaaatgtact 2340 gacctgcttg gggagaccag gtcgaagaat cgctgattct ggcacttgta tttgccctcg 2400 aactggatga gcacgtgcag atgaggttcc ccattctcgt gaagctctct gcagatcttg 2460 atgaattttt tatttgttgg agtgtgtagg ttttgtattt gggaaagtgc ttcttcttta 2520 gtaagagagc attttggata agtgaggaaa taatttttgg aatatatttg aaagcgttta 2580 gaaggcatgt tgactaaaat tgagtaccga ttgactcgct ctggcaactc tctctggtat 2640 atcggtaccc aatatatagt gagtaccaaa tggcatatga gtaattttgc aatgaaattc 2700 aaaatcctca cgctccaaaa gcggccatcc gtataatatt 2740 //