ID   JX866623; SV 1; linear; genomic RNA; STD; VRL; 714 BP.
XX
AC   JX866623;
XX
DT   19-APR-2013 (Rel. 116, Created)
DT   19-APR-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Pepino mosaic virus isolate BNMX12-05 coat protein gene, complete cds.
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-714
RX   PUBMED; 23587202.
RA   Ling K.S., Li R., Bledsoe M.;
RT   "Pepino mosaic virus genotype shift in North America and development of a
RT   loop-mediated isothermal amplification for rapid genotype identification";
RL   Virol J 10(1):117-117(2013).
XX
RN   [2]
RP   1-714
RA   Ling K.-S., Li R., Bledsoe M.;
RT   ;
RL   Submitted (23-SEP-2012) to the INSDC.
RL   Virology Laboratory, USDA-ARS, U.S. Vegetable Laboratory, 2700 Savannah
RL   Highway, Charleston, SC 29414, USA
XX
DR   MD5; 9373369176494c9558cf0b509bd30789.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNASTAR v. Lasergene10
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..714
FT                   /organism="Pepino mosaic virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="BNMX12-05"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:112229"
FT   CDS             1..714
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:M9P7X7"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:M9P7X7"
FT                   /protein_id="AFZ62523.1"
FT                   /translation="MVDNTPVAATSGSPPTAQDAGAKAPADFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPTEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKIVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 714 BP; 198 A; 201 C; 146 G; 169 T; 0 other;
     atggttgaca ataccccagt tgctgctact tctggttccc ctccaactgc tcaagatgct        60
     ggtgccaaag cccctgctga cttttcaaat cctaatacag ctcctagcct cagtgatttg       120
     aagaaagtca agtatgtgtc cacagtcact tcagtggcaa caccaactga aatagaagcc       180
     ctcggaaaga tcttcaccgc catgggactg gctgctaatg aaactggacc cgctatgtgg       240
     gatctagcgc gtgcttatgc tgatgtccaa agttcaaaat ccgcacaact cataggtgcc       300
     accccctcaa atccagcact ctcacgccgc gcacttgctg cccaatttga tcgtattaac       360
     atcacaccca ggcagttttg catgtatttt gctaaaattg tctggaacat tctgctagac       420
     agcaatatcc caccagcaaa ctgggccaag cttggttacc aagaagacac aaaatttgct       480
     gctttcgatt tcttcgatgg agtcaccaat ccagcaagtt tgcaaccagc tgacggcctc       540
     atccggcaac ccaatgaaaa ggagcttgct gctcactcag ttgctaagta tggcgcacta       600
     gccaggcaga aaatttccac tggcaactac ataaccacac ttggagaggt cacacgtgga       660
     cacatgggtg gagctaacac catgtacgca attgatgcac ccccagaact ttaa             714
//