ID JX871374; SV 1; circular; genomic DNA; STD; VRL; 2720 BP. XX AC JX871374; XX DT 04-FEB-2013 (Rel. 115, Created) DT 04-FEB-2013 (Rel. 115, Last updated, Version 1) XX DE Tomato mild mosaic virus isolate BR:Vic6:10 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato mild mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2720 RA Tavares S.S., Ramos-Sobrinho R., Gonzales-Aguilera J., Lima G.S.A., RA Assuncao I.P., Zerbini F.M.; RT "Further molecular characterization of weed-associated begomoviruses in RT Brazil with an emphasis on Sida spp."; RL Unpublished. XX RN [2] RP 1-2720 RA Tavares S.S., Ramos-Sobrinho R., Gonzales-Aguilera J., Lima G.S.A., RA Assuncao I.P., Zerbini F.M.; RT ; RL Submitted (26-SEP-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; 152bb77086ad4db80715e35bdd773826. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman6.0 v. 6.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2720 FT /organism="Tomato mild mosaic virus" FT /segment="DNA-A" FT /host="Sida urens" FT /isolate="BR:Vic6:10" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2010" FT /db_xref="taxon:536086" FT CDS 308..1057 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:B3GNB1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B3GNB1" FT /protein_id="AGD98572.1" FT /translation="MPKRDAPWRLMAGTSKVSRSVNYSPRGGPKFNKASEWVNRPMYRK FT PRIYRTLRSPDVPKGCEGPCKVQSFEARHDVSHVGKVICVSDVTRGNGITHRVGKRFCV FT KSVYILGKIWMDEAIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKS FT DLRDRFQVMRKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAAKYENHTENAMLL FT YMACTHASNPVYASLKIRIYFYDSVLN" FT CDS complement(1054..1452) FT /codon_start=1 FT /product="replication-enhancer protein" FT /note="REN" FT /db_xref="GOA:B3GNB2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B3GNB2" FT /protein_id="AGD98573.1" FT /translation="MDSRTGESITAPQAENGVYIWEISNPLYFKIYNVEDLRYTATRVY FT HIQIRFNHNLRRMLGLHKAFLNFQVWTTSVRASGTTYLHRFRQLVMLYLDQLGVISLNN FT VIRAVRFATDKPYVNYVLENHSIKFKFY" FT CDS complement(1199..1588) FT /codon_start=1 FT /product="transactivating protein" FT /note="TRAP" FT /db_xref="GOA:L7Y808" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L7Y808" FT /protein_id="AGD98574.1" FT /translation="MLNSSSSTPPSIKTKHRIAKKRATRRRRIDLDCGCSVFVHLNCAG FT HGFTHRGEHHCTSGREWRIYLGDIKSPLFQDIQRRGSTVHGDQGVPHTDTVQPQPQEDA FT GSTQGLPELPSLDDISSSFWDDIFT" FT CDS complement(1500..2585) FT /codon_start=1 FT /product="replication-associated protein" FT /note="REP" FT /db_xref="GOA:L7YE05" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L7YE05" FT /protein_id="AGD98575.1" FT /translation="MPRKGSFCIKAKNYFLTYPKCSLSKEEALSQLLALNFPVNRKFIK FT ICRELHDDGEPHLHVLFQFEGKFQCTNNRLFDLVSPTRSAHFHPNIQGAKSASDVKSYV FT DKDGDTIEWGVFQVDGRSARGGCQTANDAAAEALNAPSKEAALAIIREKLPEKYLFQFH FT NLNSNLDRMFAKAPEPWSPPFPLSSFTHVPDEMQEWADDYFGRDAAARPSRPVSLIVEG FT DSRTGKTMWARALGAHNYLSGHLDFNSRVYSNEAEYNVIDDVPPHYLKLKHWKELMGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLQKEENASLRSWTLKNAKFIFLD FT APLYQDQAQDCEEEGYQATQN" FT CDS complement(2171..2428) FT /codon_start=1 FT /product="AC4 protein" FT /note="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B3GNB5" FT /protein_id="AGD98576.1" FT /translation="MGSLISTSSSSSKGNSSARIIDSSTLSPQPGQHISIRTFRGLSRR FT PTSSPMSTRTEIQSNGEFSRSTEEVLEEVARQLTTLPQRP" XX SQ Sequence 2720 BP; 659 A; 650 C; 663 G; 748 T; 0 other; accggatggc cgcgcgattt tttccccccc ctacgtggcg ctctggaggt cgttcgatcc 60 gatcgaacgt gtcccccctc ccccaaatcc cctcgcgcgc tcaattcagt tgagcgcttt 120 tttggagtcc gcgaaatggg ttcagcgcat tttttgagtt ccgcccttta actttaattt 180 aaattaaagc cttgaccaat catttcgcgt ctgacgagtt tatttagcct aacagaactt 240 aacaacgaag ttgttgaccg accgttataa attaatcatg attggactcg tcagtcttta 300 actcagaatg ccgaagcggg acgccccatg gcgcctgatg gcgggaacct caaaggttag 360 ccgctctgtc aactattccc ctcgtggagg cccaaagttc aacaaggcat ctgagtgggt 420 caacaggccc atgtatagaa agcccaggat atatcggacg ctaaggtcac ctgacgtccc 480 caaaggctgt gaagggcctt gtaaggtcca gtcgttcgag gcgcgacatg atgtctctca 540 tgtcgggaag gtcatatgcg tctctgacgt gacgcgtggt aatggtatta cccatcgtgt 600 gggtaagcgt ttctgtgtta agtctgtata tattttaggg aagatctgga tggatgaagc 660 gatcaagctc aagaaccaca cgaacagcgt catgttctgg ttagtcagag acaggagacc 720 ctacggaact ccaatggatt ttggacaggt gttcaacctg ttcgacaacg agcccagcac 780 tgccactgtt aagagcgatc tccgtgatcg cttccaagtg atgcgcaagt tttacgccaa 840 ggtcacaggt ggacagtacg ctagcaacga gcaggctctg gtcaagcgtt tctggaaggt 900 caacaatcat gtggtctaca accatcaaga agctgcgaag tacgagaacc acacagagaa 960 cgctatgtta ttgtatatgg catgtaccca tgcctctaac cctgtgtatg cgagtctcaa 1020 gattcggatc tacttctacg actcggttct caattaataa aatttaaatt ttattgaatg 1080 attttccagt acatagttta catatggttt gtctgttgca aaccgaacag ctctaatgac 1140 attattaagg gagatcacac ctaattgatc gagatacaac ataactaact gcctaaacct 1200 atgtaaatat gtcgtcccag aagctcgaac tgatgtcgtc cagacttgga agttcaggaa 1260 ggccttgtgt agacccagca tcctcctgag gttgtggttg aaccgtatct gtatgtggta 1320 caccctggtc gccgtgtacc gtagatcctc tacgttgtat atcttgaaat agaggggatt 1380 tgatatctcc cagatatata cgccattctc tgcctgaggt gcagtgatgc tctccccggt 1440 gcgtgaatcc atgccctgcg cagttaaggt gcacgaagac cgagcacccg cagtctaggt 1500 caattctgcg tcgcctggta gccctcttct tcgcaatcct gtgcttggtc ttgatagagg 1560 ggggcgtcga ggaagatgaa tttagcattt tttaatgtcc agcttctcag tgatgcgttt 1620 tcctccttct ggaggaaatc tttatagctg gccccctctc caggattgca gagcacgatt 1680 gatgggatac cgcctttaat ttgaacaggc tttccgtatt tgcaatttga ctgccagtcc 1740 ttttgagctc ccatcaattc tttccagtgc tttagcttta ggtagtgcgg agggacgtca 1800 tcaatgacgt tatattcagc ctcatttgaa tagaccctgg agttgaagtc caggtgtcca 1860 ctgagatagt tatgggcccc taaagcacga gcccacattg ttttgcctgt tcgactatca 1920 ccttcgacta tcaaactaac aggcctactg ggccgcgcag cggcatctct tccaaaatag 1980 tcatcggccc actcttgcat ctcgtcggga acgtgagtga atgaggagag tggaaacgga 2040 ggagaccaag gttccggagc ctttgcgaac atgcgatcta aattactatt tagattatgg 2100 aattggaaga gatacttttc cggcagcttt tctctgatga tggccagcgc cgcttctttt 2160 gacggcgcgt ttaaggcctc tgcggcagcg tcgttagctg tctggcaacc tcctctagca 2220 cttcttccgt cgacctggaa aactccccat tcgattgtat ctccgtcctt gtcgacatag 2280 gacttgacgt cggacgccga cttagccccc tgaatgttcg gatggaaatg tgctgacctg 2340 gttggggaga caaggtcgaa gagtctatta ttcgtgcact ggaatttccc ttcgaactgg 2400 aagaggacgt ggagatgagg ctccccatcg tcgtgaagct ctctgcaaat tttgataaat 2460 ttcctgttaa ctgggaaatt tagggctaat aattgggaaa gtgcctcttc tttggataga 2520 gagcacttcg gataagtgag gaaataattt ttggctttta tacagaaaga gcccttccgt 2580 ggcatttttg taaataaggc cgtgtacccc caattgctcc agctccaaaa ctcatatgaa 2640 ttgggggtac tgggggtgaa tatatagtaa gaagttccta agggtatatg tcccacgtgg 2700 cggccatccg ctataatatt 2720 //