ID   KC237092; SV 1; linear; genomic DNA; STD; VRL; 921 BP.
XX
AC   KC237092;
XX
DT   14-MAY-2013 (Rel. 116, Created)
DT   14-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Tomato leaf deformation virus isolate P138:2009 C1 (C1) gene, partial cds;
DE   and C4 (C4) gene, complete cds.
XX
KW   .
XX
OS   Tomato leaf deformation virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-921
RX   DOI; 10.1016/j.virusres.2013.02.002.
RX   PUBMED; 23415858.
RA   Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B.,
RA   Aragon-Caballero L., Navas-Castillo J., Moriones E.;
RT   "Fulfilling Koch's postulates confirms the monopartite nature of tomato
RT   leaf deformation virus: A begomovirus native to the New World";
RL   Virus Res. 173(2):286-293(2013).
XX
RN   [2]
RP   1-921
RA   Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B.,
RA   Aragon-Caballero L., Navas-Castillo J., Moriones E.;
RT   ;
RL   Submitted (27-NOV-2012) to the INSDC.
RL   Fruticultura Subtropical / Fitopatologia, IHSM La Mayora (IHSM-UMA-CSIC),
RL   Camino de La Mayora, Algarrobo-Costa, Malaga 29750, Spain
XX
DR   MD5; bbec6a3758c2f0dd6e5a773902ee0957.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..921
FT                   /organism="Tomato leaf deformation virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="P138:2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Peru:Lambayeque, Mochumi"
FT                   /collected_by="E. Moriones"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:681518"
FT   gene            complement(<1..614)
FT                   /gene="C1"
FT   CDS             complement(<1..614)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="C1"
FT                   /note="Rep"
FT                   /db_xref="GOA:R4MSQ8"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:R4MSQ8"
FT                   /protein_id="AGL34906.1"
FT                   /translation="MPPPKAFKINAKNYFLTYPHCNLTKEEALSQLQNLETPTNKKYIK
FT                   IARELHEDGQHHLHVLLQFEGKFQCKNNRFFDLVSPTRSTHFHPNVQGAKSSTDVNAYV
FT                   DKDGDTLEWGEFQVDGRSARGGSQTANDAAAEALNSGSKEAALQIIREKLPEKYLFQFH
FT                   NLNCNLDKIFSKAPEPWSPPFPLSSFTNVPEEMQEWADDYFG"
FT   gene            complement(200..457)
FT                   /gene="C4"
FT   CDS             complement(200..457)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E2CUT8"
FT                   /protein_id="AGL34907.1"
FT                   /translation="MGNIISTCYSSSKANSNVRITDSSTWYPQPGQHISIRTFRELNPA
FT                   PTSTPTSTRTEIHLNGENSKSTAEVLEEAAKLLTTLPQKP"
XX
SQ   Sequence 921 BP; 234 A; 177 C; 208 G; 302 T; 0 other;
     ccaaaataat catcagccca ttcttgcatc tcctccggga cgttagtgaa ggaggagagt        60
     ggaaacggag gagaccatgg ctccggagcc ttcgaaaaaa ttttatctaa attacaattt       120
     aaattatgaa attgaaataa atatttttca gggagtttct cccttattat ttggagggct       180
     gcctctttgc taccgctatt taaggcttct gcggcagcgt cgttagcagt ttggctgcct       240
     cctctagcac ttctgccgtc gacttggaat tctccccatt caagtgtatc tccgtccttg       300
     tcgacgtagg cgttgacgtc ggtgctggat ttagctccct gaacgttcgg atggaaatgt       360
     gttgacctgg ttggggatac caggtcgaag aatctgttat tcttacattg gaatttgcct       420
     tcgaactgga gtagcacgtg gagatgatgt tgcccatctt cgtgaagttc ccttgcaatt       480
     ttgatatatt tcttatttgt gggtgtctct agattttgca attgggaaag tgcttcttct       540
     ttggttaaat tgcagtgggg atatgtaaga aaataatttt ttgcatttat cttaaaggcc       600
     ttaggggggg gcattatggt aataaatatt ttggacaccg attggtttgg cttctaaaac       660
     ttatagcaat cggtgtactg gagtcttatt tatagtagga gttcctaaag gatctagcaa       720
     cacgtggcgg ccatccgtat aatattaccg gatggccgcg cgattttttt acccccttgt       780
     taagtttggg accacacata tactgacaaa accttttgtc caatcataga gcgtctgacg       840
     agcttaatta ttaaattcct ttagactgag tggtctataa agacccagac aaactgtaat       900
     aattgatatc tttaactcaa a                                                 921
//