ID   KC404870; SV 1; linear; genomic RNA; STD; VRL; 582 BP.
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AC   KC404870;
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DT   06-MAY-2013 (Rel. 116, Created)
DT   04-JUN-2014 (Rel. 121, Last updated, Version 2)
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DE   Apple chlorotic leaf spot virus isolate YT-1-1 coat protein gene, complete
DE   cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus.
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RN   [1]
RP   1-582
RX   PUBMED; 24318575.
RA   Chen S., Zhou Y., Ye T., Hao L., Guo L., Fan Z., Li S., Zhou T.;
RT   "Genetic variation analysis of apple chlorotic leaf spot virus coat protein
RT   reveals a new phylogenetic type and two recombinants in China";
RL   Arch. Virol. 159(6):1431-1438(2014).
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RN   [2]
RP   1-582
RA   Chen S., Zhou Y., Ye T., Hao L., Zhou T.;
RT   ;
RL   Submitted (20-DEC-2012) to the INSDC.
RL   State Key Laboratory for Agrobiotechnology, China Agricultural University,
RL   No. 2, Yuanmingyuan West Road, Beijing 100193, China
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DR   MD5; dee5d8f641f81ce4dca06d68dcf43445.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNAMAN v. 5.2.2
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..582
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /host="apple"
FT                   /isolate="YT-1-1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12175"
FT   CDS             1..582
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:N0BJ57"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:N0BJ57"
FT                   /protein_id="AGK64021.1"
FT                   /translation="MAAVLNLQLKVDADLKAFLAGEGRPLHGKTGAILEQTLEAIFANI
FT                   AIQGTSEQTEFLDVTVEVKSMEDQKVIGSFNLKEVVNLIKIFRTTSLDPNINNMTFRQV
FT                   CEAFAPEARNGLVKLKYKGVFTNLFSTMPEVGGKYPELMFDFNKGLNMFIMNKAQQKVI
FT                   TNMNRRLLQTEFAKSENEAKMSSVTTDLCI"
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SQ   Sequence 582 BP; 182 A; 115 C; 149 G; 136 T; 0 other;
     atggcggcag tgctcaatct tcagttaaaa gtggacgccg atctgaaagc gttcctggcc        60
     ggagaaggca gaccccttca tggaaagaca ggggcaatac tggaacagac attggaggcc       120
     atcttcgcga acatagcgat ccaagggacc tcggagcaga cggagtttct cgacgtgaca       180
     gtggaagtca aatcaatgga ggaccagaag gtgataggct ccttcaatct gaaggaggtg       240
     gtcaatttga tcaagatctt cagaactaca tctttggatc cgaacataaa caacatgact       300
     ttccgccagg tctgtgaggc atttgctcca gaagcgagga atgggttggt aaaattgaag       360
     tacaaagggg ttttcacaaa cctattttct actatgccag aggtcggagg gaaatacccg       420
     gaactcatgt ttgatttcaa taaagggctg aacatgttca taatgaacaa ggctcagcaa       480
     aaagtgataa ccaatatgaa ccggcgtctt ttacagactg aatttgcaaa gagtgaaaat       540
     gaggcaaaaa tgtcatctgt tacgactgat ctttgcattt ag                          582
//