ID KC706625; SV 1; circular; genomic DNA; STD; VRL; 2569 BP. XX AC KC706625; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato severe rugose virus isolate BR:Car235:08 segment DNA-B, complete DE sequence. XX KW . XX OS Tomato severe rugose virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2569 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2569 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (26-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; 00b9a1da55b195867cc5cc3544728451. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2569 FT /organism="Tomato severe rugose virus" FT /segment="DNA-B" FT /host="Solanum lycopersicum" FT /isolate="BR:Car235:08" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2008" FT /db_xref="taxon:158463" FT CDS 294..1178 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:M4QWZ4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M4QWZ4" FT /protein_id="AGH29966.1" FT /translation="MNAYLNPAFAWVYTTSIHIVQVILSKYNLYFVLSYYLNMYPIKYR FT RGMLFNHRRAYSSNPVFKRLHGAKRSDFKRRSSNQIKSMDETKMSVQRIHENQFGPEFV FT IGHNSAISTFITFPTLCKTVPNRCRSYIKLRRLRFKGTIKIDRVHAEVNMDGTSPMIEG FT VFSLVVVVDRKPHLGSSGTLHSFDEIFGARIHSHGNLAIVSSLKERFYIRHVWKKVISV FT EKDTTMVDVEGSTILSNRRFNCWSSFKDIDREACNGVYANISKNALLVYYCWMSDNVSK FT ASTFVSFDLDYVG" FT CDS complement(1305..2186) FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:M4QK31" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M4QK31" FT /protein_id="AGH29965.1" FT /translation="MESQLVNPPNAFNYIESKRDEYQLSHDLTEIMLQFPSTASQLSAR FT LSRSCMKIDHCVIEYRQQVPINAVGSVIVEIHDRRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQSTHFAKFKGRLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDIDFSHVGYGKWERKMIRSASISRLGLHNPLEIMPGESWAVRSTVGLSPSEAG FT SDIENAMHPYRQLHRLGTGTLDPGDSASVIGAQRAQSNITLSMAQLNELVKAAAHECIN FT SNCTPSQPKSLK" XX SQ Sequence 2569 BP; 737 A; 444 C; 541 G; 847 T; 0 other; accggatggc cgcgcgattt ttcttatcta ctacgtggcg aaatcgtgta cgttgcctcg 60 cgctttccat tttaattgag cgcattttga agtccgcgaa atgagttaat tgtctttttg 120 aaatccgctt ttgtgaatga cctttaattt gaattaaagg ttggatagtc cgtattgaat 180 aatcatttcg cttgtttatt tcctgtcgtg atgtaattac aaccgttcgt taaaaatata 240 agaaatctac gacgtggact gtctaaattt catctacata gttaatttga caaatgaatg 300 catatttaaa ccccgctttc gcgtgggttt acaccacgtc tatacatatt gtccaggtta 360 ttttgtctaa gtataattta tattttgtct tatcttatta tctgaacatg tatcccatta 420 agtatagacg tggaatgttg tttaatcatc gacgagctta ctcatctaat cccgtattta 480 agcgtttaca cggagcgaaa cgaagtgatt tcaagcgtcg ttcgagtaat cagattaaga 540 gcatggatga gactaaaatg tctgttcagc ggattcatga gaaccagttt ggccctgaat 600 ttgtaattgg ccacaattct gccatatcca cattcattac attccctact ctttgtaaga 660 ctgtcccgaa ccgttgtagg tcatacataa agttaagacg actacgtttt aaaggaacaa 720 tcaagattga ccgtgttcat gctgaggtga atatggacgg tacaagtcca atgattgaag 780 gagtcttctc tctggttgta gtcgttgatc gcaaacctca tttgggctca tctggaactc 840 tgcattcttt tgatgagata tttggtgcaa ggattcatag ccatggtaac ctggcaatag 900 tatcctctct gaaagagcgt ttttacatac gtcacgtttg gaagaaagta atatccgttg 960 agaaggatac aaccatggtt gatgttgaag gaagtactat tttatctaac aggcgtttta 1020 attgttggtc atcctttaag gatattgacc gtgaagcatg taatggtgtt tatgcaaaca 1080 taagcaagaa cgccctgtta gtttattact gttggatgtc tgataatgtg tctaaggcat 1140 cgacatttgt atcatttgac cttgattatg ttggctaaat agtaagtgta atacgtgatt 1200 agtaataatg tttaactctc tttaataata aatacatgta cttgtatagt aataatgttc 1260 aactcgcagt aataacaaaa aaaatgtgtt taataatata gaatttattt taaagatttt 1320 ggctgtgaag gggtacagtt gctgtttata cattcatggg ccgctgcttt aacaagttcg 1380 tttaattggg ccattgaaag tgttatgttc gattgggccc gttgagcacc aattacggac 1440 gcagaatcac ctggatctaa tgtgcctgta cccagtctat gtaattgtct gtatggatgc 1500 atcgcgttct ctatatctga gcccgcctct gatgggctta agcctacagt acttctaaca 1560 gcccatgact ctccgggcat tatttcaagt gggttgtgaa ggcccaatct ggatattgag 1620 gcggatctga tcatcttcct ttcccatttg ccatagccta cgtgactgaa atcaatgtcc 1680 ttatctgtaa attgttttga aaggattttc accgttgggg cacggaaagg tatatcaacc 1740 gaatgtttag ccgtcgagag tttcagtctc cctttgaatt tagcgaagtg ggtactctgg 1800 tgaacgttcg tgtcacatac tctgtagtac aatttccatg gaattgggtc cttaagggag 1860 aagaacgacg acgaaaagta gtgaagatct atgttacatc tgataggaaa ggtccacgac 1920 gcctgtagtg attcattgtc cgtcattctt ctgtcatgaa tttcgactat aactgaacct 1980 acggcgttaa ttggtacttg ttgtctgtat tctattacgc aatggtcgat tttcatacag 2040 ctacgactaa gccttgcgct taattgagac gccgttgaag ggaattgaag cataatctcg 2100 gttagatcat gggaaagctg atattcatca cgcttagatt ctatataatt aaatgcgttg 2160 ggaggattca caagctgaga ttccattatt gaaaataggg agcgcagcga caatgtttga 2220 ggaatgttaa taagggaaga tgataatatt ttcgtcaaat gaatatatga caagaaaatt 2280 gtctgacgat ccaattgaga aattggagat gataataact aaaaaacgag gaatcaggag 2340 acgacgaatt gagagaagat attgtatatt ttaggtgtaa ttgataaata cccctctatt 2400 tgctctttaa atagaatttt caaggcaatg gcatatttgt aaatatgact actactacca 2460 attggtagct gctctaaaac tcatatgaat tggtagttat ggtagctctt atatagtaga 2520 agttccttta aggatattgc tacacgtggc ggccatccgt tataatatt 2569 //