ID   KC748230; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
XX
AC   KC748230;
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DT   04-JUN-2013 (Rel. 117, Created)
DT   03-SEP-2014 (Rel. 122, Last updated, Version 2)
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DE   Papaya ringspot virus isolate CbVC-1 coat protein gene, partial cds.
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KW   .
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OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-924
RA   Rodriguez-Martinez D., Geraldino-Duarte P.S., Gonzalez-Olmedo J.,
RA   Figueira A.R.;
RT   "Molecular and Biological Studies of Papaya Ringspot Virus Isolates from
RT   Brazil and Cuba";
RL   Unpublished.
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RN   [2]
RP   1-924
RA   Rodriguez-Martinez D., Geraldino-Duarte P.S., Gonzalez-Olmedo J.,
RA   Figueira A.R.;
RT   ;
RL   Submitted (04-MAR-2013) to the INSDC.
RL   Department of Plant Pathology, Federal University of Lavras, Campus
RL   Universitario da UFLA, Lavras, Minas Gerais 37200-000, Brazil
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DR   MD5; 01b8f770e0ffafd02155475a42b58e63.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: Bioedit v. 5
CC   Assembly Name         :: Coat protein secuence
CC   Coverage              :: 100
CC   Sequencing Technology :: Applied Biosystems 3730/3730xl DNA
CC                            Analyzers
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..924
FT                   /organism="Papaya ringspot virus"
FT                   /host="Carica papaya L"
FT                   /isolate="CbVC-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Cuba:SantaClara, Villa Clara"
FT                   /collection_date="07-Feb-2011"
FT                   /PCR_primers="fwd_seq: cttgarcargctccattc, rev_seq:
FT                   ctaaaagcacggagg"
FT                   /note="biotype: P"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..924
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:R9RZI0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:R9RZI0"
FT                   /protein_id="AGM75849.1"
FT                   /translation="SKSTDDYQLICSENVHVFHQSKNEAVDAGLNEKLKEKEKQKEKEK
FT                   EKQKEKEKDDVSDGNGESTSTKIGERDRDVNIGTSGTFAVPRNKTFTDKMILPRIKGKT
FT                   VLNLNHLLQYNPKQIDISNTRATQSQFEKWYEGVRNDYGLNDNEMHVMLNGLMVWCIEN
FT                   GTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQVMAHFSNAAEAYIAKRNATERYM
FT                   PRYGMKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTSRRMFGIDGSVS
FT                   NKEENTERHTVEDVNRDMHSLLGMRN"
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SQ   Sequence 924 BP; 322 A; 151 C; 225 G; 226 T; 0 other;
     tcgaagagca ctgatgatta ccaacttatt tgtagtgaaa acgtgcatgt gtttcatcag        60
     tccaaaaacg aagctgttga cgctggtttg aatgagaagc tcaaagaaaa agaaaaacag       120
     aaagaaaaag aaaaagaaaa acaaaaagag aaagaaaaag atgatgttag tgacggaaat       180
     ggtgagtcaa ctagcacaaa aattggagag agagataggg atgtcaatat tgggaccagt       240
     ggaactttcg ctgttccgag aaataaaaca tttactgata agatgatttt accgagaatt       300
     aagggaaaga ctgtccttaa cttaaatcat cttcttcagt ataatccgaa acaaattgac       360
     atttctaaca ctcgtgccac tcagtcacaa tttgagaagt ggtatgaggg agtgaggaat       420
     gattatggcc ttaatgataa tgaaatgcac gtgatgctaa atggcttgat ggtttggtgt       480
     atcgaaaatg gtacatctcc agacatatct ggtgtctggg ttatgatgga tggggaaacc       540
     caagttgatt atccaatcaa gcctttaatt gagcatgcta ctccgtcatt taggcaagtt       600
     atggctcact ttagtaacgc ggcagaagca tacattgcaa agagaaatgc tactgagagg       660
     tacatgccgc ggtatggaat gaagagaaat ttgactgaca ttagcctcgc tagatatgct       720
     ttcgatttct atgaggtgaa ttcgaaaaca cctgataggg ctcgcgaagc tcacatgcag       780
     atgaaagctg cggcgctgcg aaacactagt cgcagaatgt ttggcataga cggcagtgtt       840
     agtaacaagg aagaaaacac ggagagacac acagtggaag atgtcaatag agacatgcac       900
     tctctcctgg gtatgcgtaa ctga                                              924
//