ID   M17700; SV 1; linear; genomic RNA; STD; VRL; 1797 BP.
XX
AC   M17700;
XX
DT   02-APR-1988 (Rel. 15, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Influenza C/California/78 nucleoprotein RNA (seg 5), complete cds.
XX
KW   nucleoprotein.
XX
OS   Influenza C virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Gammainfluenzavirus.
XX
RN   [1]
RP   1-1797
RX   DOI; 10.1016/0168-1702(84)90001-7.
RX   PUBMED; 6532006.
RA   Nakada S., Creager R.S., Krystal M., Palese P.;
RT   "Complete nucleotide sequence of the influenza C/California/78 virus
RT   nucleoprotein gene";
RL   Virus Res. 1(6):433-441(1984).
XX
DR   MD5; bdca01e5a4cd6b9b4972eced612a66a9.
DR   EuropePMC; PMC2590603; 18973655.
XX
CC   Reprint of [1] kindly provided by P.Palese, 17-NOV-1987. The poly-A
CC   rich tract at positions 1777-1781 probably represents the
CC   polyadenylation site for the virion mRNA.  The 12 nucleotides
CC   preceding the 5' end of the sequence below are probably preserved
CC   between influenza C/California and the C.JHG/66 virus RNA
CC   (Desselberger et al., Gene 8, 315-328 (1980)).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1797
FT                   /organism="Influenza C virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11552"
FT   CDS             18..1715
FT                   /codon_start=1
FT                   /note="nucleoprotein"
FT                   /db_xref="GOA:P08028"
FT                   /db_xref="InterPro:IPR002141"
FT                   /db_xref="UniProtKB/Swiss-Prot:P08028"
FT                   /protein_id="AAA43798.1"
FT                   /translation="MSDRRQNRKTPDEQRKANALIINENIEAYIAICKEVGLNGDEMLI
FT                   LENGIAIEKAIRICCDGKYQEKREKKAREAQRADSNFNADSIGIRLVKRAGSGTNITYH
FT                   AVVELTSRSRIVQILKSHWGNELNRAKIAGKRLGFSALFASNLEAIIYQRGRNAARRNG
FT                   SAELFTLTQGAGIETRYKWIMEKHIGIGVLIADAKGLINGKREGKRGVDANVKLRAGTT
FT                   GSPLERAMQGIEKKAFPGPLRALARRVVKANYNDAREALNVIAEASLLLKPQITNKMTM
FT                   PWCMWLAARLTLKDEFTNFCAYAGRRAFEVFNIAMEKIGICSFQGTIMNDDEIESIEDK
FT                   AQVLMMACFGLAYEDFSLVSAMVSHPLKLRNRMKIGNFRVGEKVSTVLSPLLRFTRWAA
FT                   FAQRFALQANTSREGTQISNSAVFAVERKITTDVQRVEELLNKVQAHEDEPLQTLYKKV
FT                   REQISIIGRNKSEIKEFLGSSMYDLNDQEKQNPINFRSGAHPFFFEFDPDYNPIRVKRP
FT                   KKPIAKRNSNISRLEEEGMDENSEIGQAKKMKPLDQLASTSSNIPGEN"
XX
SQ   Sequence 1797 BP; 669 A; 315 C; 383 G; 430 T; 0 other;
     agatttggtt ttcaaaaatg tctgacagac gtcaaaacag aaaaacgcca gatgagcaac        60
     gcaaagccaa tgctctcata ataaatgaga acattgaagc ctacattgcc atttgtaagg       120
     aagtgggcct taatggcgat gaaatgttga tcctggaaaa tggcatagca attgaaaaag       180
     ctataagaat atgttgtgat ggaaagtatc aagagaagag ggaaaagaaa gcaagagaag       240
     cccaaagagc ggacagcaac ttcaacgcag attccattgg gatcagacta gttaaaagag       300
     ctggttcagg caccaatata acctaccatg cagttgttga actgacaagc cgctcaagaa       360
     ttgttcaaat tctcaaatct cattggggaa atgaactaaa cagagcaaaa attgcaggaa       420
     aaagactcgg cttctctgca ctctttgctt ctaacttaga agcaattatt tatcaaagag       480
     gaagaaacgc agcaagaaga aacggttctg ctgaattgtt cactctcact caaggggctg       540
     gaattgaaac tagatataaa tggataatgg aaaagcacat cggaattgga gttcttatag       600
     ctgacgcgaa aggtttaata aatggaaaga gagaaggcaa aagaggagtt gatgccaatg       660
     taaaattgag agcaggaacg actggttccc ctctggaaag agccatgcaa ggaattgaga       720
     aaaaagcgtt tcctggacct ttaagagcac tagcaagaag agttgtaaaa gcaaactaca       780
     atgatgccag agaagctcta aatgtcatcg cagaagcatc actcctgtta aagcctcaaa       840
     taaccaacaa gatgacaatg ccttggtgta tgtggctggc tgccagactt actctgaaag       900
     atgagtttac caatttctgt gcatatgcgg gaagaagagc ctttgaggtc ttcaatattg       960
     caatggagaa aattggaatt tgttcctttc aagggacaat aatgaacgat gatgaaattg      1020
     aatcaataga ggacaaggct caagtattga tgatggcatg ctttggactt gcttatgaag      1080
     acttcagttt ggtctctgct atggtcagcc accctcttaa gttgagaaac agaatgaaaa      1140
     taggaaactt cagagtcggt gaaaaagttt caacagtgct ttctccctta ttgagattca      1200
     caagatgggc agcatttgct caaagatttg ctcttcaggc aaatacttca agagaaggca      1260
     ctcaaatcag caattcagca gtttttgcag tggaaaggaa aataaccaca gatgtccaaa      1320
     gagttgaaga gctactaaat aaagttcaag ctcacgaaga cgaaccatta caaacacttt      1380
     acaaaaaagt aagagaacaa atttccataa ttggaaggaa caagtccgaa ataaaggagt      1440
     ttctagggtc ttcaatgtat gatttaaatg atcaagaaaa acaaaatcca ataaatttca      1500
     ggtctggagc acaccctttc tttttcgaat tcgacccaga ctacaacccc ataagagtga      1560
     aaagacccaa aaaaccaata gcaaagagaa attcaaatat cagcagattg gaagaagaag      1620
     gaatggatga aaattcagag atcggacaag ccaagaagat gaaacccttg gatcaattgg      1680
     ccagcactag tagcaacatt cctggagaaa attaaagtca gattaaattc atcacatatt      1740
     ttatgatcaa ctgttgtatt gttatatata taattcaaaa acctccttgc tactgct         1797
//