Services
Research
Training
Industry
About us
ChEBI
Examples:
iron*
,
InChI=1S/CH4O/c1-2/h2H,1H3
,
caffeine
Advanced
Home
Advanced Search
Browse
Documentation
Download
Tools
About ChEBI
Submit
Contact us
DiNA
Statistics
Entity of the Month
Periodic Table
Ontology
Train online
User Manual
Annotation Manual
Developer Manual
FAQ's
BiNChE
libChEBI
Web Services
ChEBI
> Main
CHEBI:16176 -
D
-ornithine
Main
ChEBI Ontology
Automatic Xrefs
Reactions
Pathways
Models
ChEBI Name
D
-ornithine
ChEBI ID
CHEBI:16176
ChEBI ASCII Name
D-ornithine
Definition
The
D
-enantiomer of ornithine. It is an intermediate metabolite produced in the urea cycle.
Stars
This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs
CHEBI:4220, CHEBI:13006, CHEBI:21066
Supplier Information
Download
Molfile
XML
SDF
Find compounds which contain this structure
Find compounds which resemble this structure
Take structure to the Advanced Search
Formula
C5H12N2O2
Net Charge
0
Average Mass
132.16106
Monoisotopic Mass
132.08988
InChI
InChI=1S/C5H12N2O2/c6-3-1-2-4(7)5(8)9/h4H,1-3,6-7H2,(H,8,9)/t4-/m1/s1
InChIKey
AHLPHDHHMVZTML-SCSAIBSYSA-N
SMILES
NCCC[C@@H](N)C(O)=O
Metabolite of Species
Details
Mus musculus
(NCBI:txid10090)
Source: BioModels - MODEL1507180067 See:
PubMed
Roles Classification
Chemical Role
(s):
Bronsted base
A molecular entity capable of accepting a hydron from a donor (Br
o
nsted acid).
(via
organic amino compound
)
Bronsted acid
A molecular entity capable of donating a hydron to an acceptor (Br
o
nsted base).
(via
oxoacid
)
Biological Role
(s):
mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (
Mus musculus
).
Escherichia coli metabolite
Any bacterial metabolite produced during a metabolic reaction in
Escherichia coli
.
(via
ornithine
)
algal metabolite
Any eukaryotic metabolite produced during a metabolic reaction in algae including unicellular organisms like chlorella and diatoms to multicellular organisms like giant kelps and brown algae.
(via
ornithine
)
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (
Homo sapiens
).
(via
ornithine
)
Daphnia magna metabolite
A
Daphnia
metabolite produced by the species
Daphnia magna
.
(via
ornithine
)
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
D
-ornithine (
CHEBI:16176
)
has role
mouse metabolite (
CHEBI:75771
)
D
-ornithine (
CHEBI:16176
)
is a
D
-α-amino acid (
CHEBI:16733
)
D
-ornithine (
CHEBI:16176
)
is a
ornithine (
CHEBI:18257
)
D
-ornithine (
CHEBI:16176
)
is conjugate base of
D
-ornithinium(1+) (
CHEBI:57668
)
D
-ornithine (
CHEBI:16176
)
is enantiomer of
L
-ornithine (
CHEBI:15729
)
Incoming
D
-ornithine derivative (
CHEBI:84714
)
has functional parent
D
-ornithine (
CHEBI:16176
)
D
-ornithinium(1+) (
CHEBI:57668
)
is conjugate acid of
D
-ornithine (
CHEBI:16176
)
L
-ornithine (
CHEBI:15729
)
is enantiomer of
D
-ornithine (
CHEBI:16176
)
IUPAC Names
(2
R
)-2,5-diaminopentanoic acid
D
-ornithine
Synonyms
Sources
(
R
)-ornithine
ChEBI
D-Ornithine
KEGG COMPOUND
Manual Xrefs
Databases
C00515
KEGG COMPOUND
CPD-217
MetaCyc
HMDB0003374
HMDB
ORD
PDBeChem
View more database links
Registry Numbers
Types
Sources
1722297
Reaxys Registry Number
Reaxys
348-66-3
CAS Registry Number
KEGG COMPOUND
348-66-3
CAS Registry Number
ChemIDplus
431663
Gmelin Registry Number
Gmelin
Citations
Types
Sources
21525873
PubMed citation
Europe PMC
24326351
PubMed citation
Europe PMC
24562332
PubMed citation
Europe PMC
Last Modified
27 January 2016