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ChEBI
> Main
CHEBI:73079 - kanamycin D
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ChEBI Ontology
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ChEBI Name
kanamycin D
ChEBI ID
CHEBI:73079
Definition
A kanamycin that is kanamycin A in which the 3''-amino group is replaced by a hydroxy group.
Stars
This entity has been manually annotated by the ChEBI Team.
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Formula
C18H35N3O12
Net Charge
0
Average Mass
485.48340
Monoisotopic Mass
485.22207
InChI
InChI=1S/C18H35N3O12/c19-
2-
6-
8(23)
10(25)
12(27)
17(30-
6)
32-
15-
4(20)
1-
5(21)
16(14(15)
29)
33-
18-
13(28)
11(26)
9(24)
7(3-
22)
31-
18/h4-
18,22-
29H,1-
3,19-
21H2/t4-
,5+,6+,7+,8+,9+,10-
,11-
,12+,13+,14-
,15+,16-
,17+,18+/m0/s1
InChIKey
NZCOZAMBHLSNDW-HNDNCJINSA-N
SMILES
NC[C@H]
1O[C@H]
(O[C@@H]
2[C@@H]
(N)
C[C@@H]
(N)
[C@H]
(O[C@H]
3O[C@H]
(CO)
[C@@H]
(O)
[C@H]
(O)
[C@H]
3O)
[C@H]
2O)
[C@H]
(O)
[C@@H]
(O)
[C@@H]
1O
Roles Classification
Biological Role
(s):
antimicrobial agent
A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.
(via
carbohydrate-containing antibiotic
)
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
kanamycin D (
CHEBI:73079
)
has functional parent
kanamycin A (
CHEBI:17630
)
kanamycin D (
CHEBI:73079
)
is a
kanamycins (
CHEBI:24951
)
kanamycin D (
CHEBI:73079
)
is conjugate base of
kanamycin D(3+) (
CHEBI:72947
)
Incoming
kanamycin (
CHEBI:6104
)
has part
kanamycin D (
CHEBI:73079
)
kanamycin D(3+) (
CHEBI:72947
)
is conjugate acid of
kanamycin D (
CHEBI:73079
)
IUPAC Name
(1
S
,2
S
,3
R
,4
S
,6
R
)-
4,6-
diamino-
3-
[(6-
amino-
6-
deoxy-
α-
D
-
glucopyranosyl)oxy]-
2-
hydroxycyclohexyl α-
D
-
glucopyranoside
Synonym
Source
3''-deamino-3''-hydroxykanamycin A
ChEBI
Manual Xref
Database
CPD-14138
MetaCyc
View more database links
Citations
Types
Sources
22374809
PubMed citation
Europe PMC
9134733
PubMed citation
Europe PMC
Last Modified
02 April 2013