CHEBI:136877 - 5-hydroxyuridine 5'-phosphate(1−) residue

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ChEBI Name 5-hydroxyuridine 5'-phosphate(1−) residue
ChEBI ID CHEBI:136877
ChEBI ASCII Name 5-hydroxyuridine 5'-phosphate(1-) residue
Definition A ribonucleotide residue(1−) obtained by deprotonation of the phosphate OH group of 5-hydroxy-UMP residue. Major microspecies at pH 7.4.
Stars This entity has been manually annotated by the ChEBI Team.
Submitter Anne Morgat
Download Molfile XML SDF
Formula C9H10N2O9P
Net Charge -1
Average Mass 321.158
Monoisotopic Mass 321.01239
SMILES C1=C(C(NC(N1[C@@H]2O[C@H](COP(*)(=O)[O-])[C@H]([C@H]2O)O*)=O)=O)O
ChEBI Ontology
Outgoing 5-hydroxyuridine 5'-phosphate(1−) residue (CHEBI:136877) is a ribonucleotide residue(1−) (CHEBI:90675)
Synonyms Sources
5-(hydroxy)uridine 5'-phosphate residue UniProt
5-hydroxy-UMP(1−) residue ChEBI
Citations
Kim J, Xiao H, Koh J, Wang Y, Bonanno JB, Thomas K, Babbitt PC, Brown S, Lee YS, Almo SC (2015)
Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic acids research 43, 4602-4613 (Source: SUBMITTER) [PubMed:25855808]
[show Abstract]
Kim J, Xiao H, Bonanno JB, Kalyanaraman C, Brown S, Tang X, Al-Obaidi NF, Patskovsky Y, Babbitt PC, Jacobson MP, Lee YS, Almo SC (2013)
Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function.
Nature 498, 123-126 (Source: SUBMITTER) [PubMed:23676670]
[show Abstract]
Last Modified
29 June 2017