CHEBI:17562 - cytidine

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ChEBI Name cytidine ChEBI ID CHEBI:17562 Definition A pyrimidine nucleoside in which cytosine is attached to ribofuranose via a β-N1-glycosidic bond. Stars This entity has been manually annotated by the ChEBI Team. Secondary ChEBI IDs CHEBI:14063, CHEBI:41704, CHEBI:41709, CHEBI:41649, CHEBI:41686, CHEBI:4053, CHEBI:23515 Supplier Information ZINC000003830679 Download Molfile XML SDF Find compounds which contain this structure Find compounds which resemble this structure Take structure to the Advanced Search Wikipedia License Cytidine (symbol C or Cyd) is a nucleoside molecule that is formed when cytosine is attached to a ribose ring (also known as a ribofuranose) via a β-N1-glycosidic bond. Cytidine is a component of RNA. It is a white water-soluble solid that is only slightly soluble in ethanol. Read full article at Wikipedia Formula C9H13N3O5 Net Charge 0 Average Mass 243.21674 Monoisotopic Mass 243.08552 InChI InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7-,8-/m1/s1 InChIKey UHDGCWIWMRVCDJ-XVFCMESISA-N SMILES Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1 Metabolite of Species Details Mus musculus (NCBI:txid10090) Source: BioModels - MODEL1507180067 See: PubMed Saccharomyces cerevisiae (NCBI:txid4932) Source: yeast.sf.net See: PubMed Escherichia coli (NCBI:txid562) See: PubMed Homo sapiens (NCBI:txid9606) See: DOI Roles Classification Biological Role(s): Escherichia coli metabolite Any bacterial metabolite produced during a metabolic reaction in Escherichia coli. Saccharomyces cerevisiae metabolite Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ). human metabolite Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens). mouse metabolite Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus). View more via ChEBI Ontology ChEBI Ontology Outgoing cytidine (CHEBI:17562) has functional parent cytosine (CHEBI:16040) cytidine (CHEBI:17562) has role Escherichia coli metabolite (CHEBI:76971) cytidine (CHEBI:17562) has role Saccharomyces cerevisiae metabolite (CHEBI:75772) cytidine (CHEBI:17562) has role human metabolite (CHEBI:77746) cytidine (CHEBI:17562) has role mouse metabolite (CHEBI:75771) cytidine (CHEBI:17562) is a cytidines (CHEBI:23524) Incoming 3'-deoxy-3',4'-didehydro-cytidine (CHEBI:156331) has functional parent cytidine (CHEBI:17562) 5-ethynylcytidine (CHEBI:228294) has functional parent cytidine (CHEBI:17562) N4-hydroxycytidine (CHEBI:180654) has functional parent cytidine (CHEBI:17562) cytidine residue (CHEBI:64656) is substituent group from cytidine (CHEBI:17562) IUPAC Name cytidine Synonyms Sources 1-beta-D-Ribofuranosylcytosine HMDB 1β-D-ribofuranosylcytosine NIST Chemistry WebBook 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE PDBeChem 4-amino-1-β-D-ribofuranosylpyrimidin-2(1H)-one ChEBI 4-amino-1β-D-ribofuranosyl-2(1H)-pyrimidinone NIST Chemistry WebBook Cyd CBN Cytidin ChEBI Cytidine KEGG COMPOUND cytidine UniProt Cytosine riboside HMDB cytosine-1beta-D-Ribofuranoside HMDB Zytidin ChEBI Manual Xrefs Databases C00475 KEGG COMPOUND CTN PDBeChem Cytidine Wikipedia CYTIDINE MetaCyc D07769 KEGG DRUG DB02097 DrugBank HMDB0000089 HMDB View more database links Registry Numbers Types Sources 65-46-3 CAS Registry Number NIST Chemistry WebBook 65-46-3 CAS Registry Number ChemIDplus 84763 Gmelin Registry Number Gmelin 89173 Reaxys Registry Number Reaxys Citations Types Sources 12591866 PubMed citation Europe PMC 15621516 PubMed citation Europe PMC 19194376 PubMed citation Europe PMC Last Modified 20 December 2023