CHEBI:75908 - 5'-CTGC-3' dsDNA oligonucleotide

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ChEBI Name 5'-CTGC-3' dsDNA oligonucleotide ChEBI ID CHEBI:75908 Definition A double-stranded DNA fragment consisting of a 5'-CTGC-3' strand antiparallel to a 3'-GACG-5' strand. Stars This entity has been manually annotated by the ChEBI Team. Supplier Information Download Molfile XML SDF Find compounds which contain this structure Find compounds which resemble this structure Take structure to the Advanced Search Formula C77H99N31O44P6 Net Charge 0 Average Mass 2348.63380 Monoisotopic Mass 2347.48879 InChI InChI=1S/C39H49N18O21P3.C38H50N13O23P3/c40-23-1-2-54(39(62)49-23)25-5-17(21(74-25)9-70-80(65,66)76-16-4-27(72-19(16)7-58)57-14-48-30-34(57)51-38(43)53-36(30)61)77-81(67,68)71-10-22-18(6-26(75-22)55-12-46-28-31(41)44-11-45-32(28)55)78-79(63,64)69-8-20-15(59)3-24(73-20)56-13-47-29-33(56)50-37(42)52-35(29)60;1-16-10-50(38(58)47-33(16)54)29-8-19(23(70-29)13-66-76(61,62)72-18-7-28(68-21(18)11-52)49-5-3-26(40)44-37(49)57)73-77(63,64)67-14-24-20(9-30(71-24)51-15-42-31-32(51)45-35(41)46-34(31)55)74-75(59,60)65-12-22-17(53)6-27(69-22)48-4-2-25(39)43-36(48)56/h1-2,11-22,24-27,58-59H,3-10H2,(H,63,64)(H,65,66)(H,67,68)(H2,40,49,62)(H2,41,44,45)(H3,42,50,52,60)(H3,43,51,53,61);2-5,10,15,17-24,27-30,52-53H,6-9,11-14H2,1H3,(H,59,60)(H,61,62)(H,63,64)(H2,39,43,56)(H2,40,44,57)(H,47,54,58)(H3,41,45,46,55)/t15-,16-,17-,18-,19+,20+,21+,22+,24+,25+,26+,27+;17-,18-,19-,20-,21+,22+,23+,24+,27+,28+,29+,30+/m00/s1 InChIKey XUONHJOJRGCZJF-LPTGMBEMSA-N SMILES Cc1cn([C@H]2C[C@H](OP(O)(=O)OC[C@H]3O[C@H](C[C@@H]3OP(O)(=O)OC[C@H]3O[C@H](C[C@@H]3O)n3ccc(N)nc3=O)n3cnc4c3nc(N)[nH]c4=O)[C@@H](COP(O)(=O)O[C@H]3C[C@@H](O[C@@H]3CO)n3ccc(N)nc3=O)O2)c(=O)[nH]c1=O.Nc1ccn([C@H]2C[C@H](OP(O)(=O)OC[C@H]3O[C@H](C[C@@H]3OP(O)(=O)OC[C@H]3O[C@H](C[C@@H]3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)[C@@H](COP(O)(=O)O[C@H]3C[C@@H](O[C@@H]3CO)n3cnc4c3nc(N)[nH]c4=O)O2)c(=O)n1 ChEBI Ontology Outgoing 5'-CTGC-3' dsDNA oligonucleotide (CHEBI:75908) has part 5'-CTGC-3' (CHEBI:75900) 5'-CTGC-3' dsDNA oligonucleotide (CHEBI:75908) has part 5'-GCAG-3' (CHEBI:75911) 5'-CTGC-3' dsDNA oligonucleotide (CHEBI:75908) is a double-stranded DNA fragment (CHEBI:75909) Citation Type Source 15557264 PubMed citation Europe PMC Last Modified 11 October 2013