CHEBI:9532 - thiamine(1+) diphosphate

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ChEBI Name thiamine(1+) diphosphate
ChEBI ID CHEBI:9532
Definition A thiamine phosphate that is thiamine(1+) in which the hydroxy group has been replaced by a diphosphate group. It is the active form of vitamin B1 and an essential cofactor for enzymes in key metabolic pathways.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information eMolecules:2726636, ZINC000008215517
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Thiamine pyrophosphate (TPP or ThPP), or thiamine diphosphate (ThDP), or cocarboxylase is a thiamine (vitamin B1) derivative which is produced by the enzyme thiamine diphosphokinase. Thiamine pyrophosphate is a cofactor that is present in all living systems, in which it catalyzes several biochemical reactions. Thiamine pyrophosphate is synthesized in the cytosol and is required in the cytosol for the activity of transketolase and in the mitochondria for the activity of pyruvate-, oxoglutarate- and branched chain keto acid dehydrogenases. To date, the yeast ThPP carrier (Tpc1p) the human Tpc and the Drosophila melanogaster have been identified as being responsible for the mitochondrial transport of ThPP and ThMP. It was first discovered as an essential nutrient (vitamin) in humans through its link with the peripheral nervous system disease beriberi, which results from a deficiency of thiamine in the diet. TPP works as a coenzyme in many enzymatic reactions, such as: Pyruvate dehydrogenase complex Pyruvate decarboxylase in ethanol fermentation Alpha-ketoglutarate dehydrogenase complex Branched-chain amino acid dehydrogenase complex 2-hydroxyphytanoyl-CoA lyase Transketolase
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Formula C12H19N4O7P2S
Net Charge +1
Average Mass 425.310
Monoisotopic Mass 425.04442
InChI InChI=1S/C12H18N4O7P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H4-,13,14,15,17,18,19,20,21)/p+1
InChIKey AYEKOFBPNLCAJY-UHFFFAOYSA-O
SMILES CC1=C(CCOP(O)(=O)OP(O)(O)=O)SC=[N+]1CC1=C(N)N=C(C)N=C1
Metabolite of Species Details
Mus musculus (NCBI:txid10090) See: PubMed
Mus musculus (NCBI:txid10090) Source: BioModels - MODEL1507180067 See: PubMed
Mus musculus (NCBI:txid10090) From MetaboLights See: MetaboLights Study
Mus musculus (NCBI:txid10090) From MetaboLights See: MetaboLights Study
Arabidopsis thaliana (NCBI:txid3702) See: PubMed
Saccharomyces cerevisiae (NCBI:txid4932) See: PubMed
Escherichia coli (NCBI:txid562) See: PubMed
Escherichia coli (NCBI:txid562) See: PubMed
Homo sapiens (NCBI:txid9606) See: PubMed
Homo sapiens (NCBI:txid9606) Found in cerebrospinal fluid (UBERON:0001359). See: PubMed
Homo sapiens (NCBI:txid9606) Found in blood (UBERON:0000178). See: PubMed
Roles Classification
Chemical Role(s): Bronsted base
A molecular entity capable of accepting a hydron from a donor (Bronsted acid).
(via organic amino compound )
Biological Role(s): fundamental metabolite
Any metabolite produced by all living cells.
cofactor
An organic molecule or ion (usually a metal ion) that is required by an enzyme for its activity. It may be attached either loosely (coenzyme) or tightly (prosthetic group).
water-soluble vitamin (role)
Any vitamin that dissolves in water and readily absorbed into tissues for immediate use. Unlike the fat-soluble vitamins, they are not stored in the body and need to be replenished regularly in the diet and will rarely accumulate to toxic levels since they are quickly excreted from the body via urine.
(via B vitamin )
Application(s): nutraceutical
A product in capsule, tablet or liquid form that provide essential nutrients, such as a vitamin, an essential mineral, a protein, an herb, or similar nutritional substance.
(via B vitamin )
View more via ChEBI Ontology
ChEBI Ontology
Outgoing thiamine(1+) diphosphate (CHEBI:9532) has role cofactor (CHEBI:23357)
thiamine(1+) diphosphate (CHEBI:9532) has role fundamental metabolite (CHEBI:78675)
thiamine(1+) diphosphate (CHEBI:9532) is a thiamine phosphate (CHEBI:26945)
thiamine(1+) diphosphate (CHEBI:9532) is a vitamin B1 (CHEBI:26948)
thiamine(1+) diphosphate (CHEBI:9532) is conjugate acid of thiamine(1+) diphosphate(1−) (CHEBI:45931)
Incoming thiamine(1+) diphosphate chloride (CHEBI:18290) has part thiamine(1+) diphosphate (CHEBI:9532)
thiamine(1+) diphosphate(1−) (CHEBI:45931) is conjugate base of thiamine(1+) diphosphate (CHEBI:9532)
IUPAC Name
3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-[2-(diphosphooxy)ethyl]-4-methyl-1,3-thiazol-3-ium
Synonyms Sources
3-[(4-amino-2-methyl-5-pyrimidinyl)methyl]-4-methyl-5-(4,6,6-trihydroxy-4,6-dioxido-3,5-dioxa-4,6-diphosphahex-1-yl)thiazolium ChEBI
3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium IUPAC
ThDP ChEBI
thiamin diphosphate KEGG COMPOUND
thiamin pyrophosphate KEGG COMPOUND
thiamine diphosphate KEGG COMPOUND
thiamine pyrophosphate PDBeChem
thiamine-pyrophosphate HMDB
ThPP KEGG COMPOUND
TPP KEGG COMPOUND
Manual Xrefs Databases
1100 ChemSpider
C00019627 KNApSAcK
C00068 KEGG COMPOUND
ECMDB01372 ECMDB
FDB022584 FooDB
HMDB0001372 HMDB
Thiamine_pyrophosphate Wikipedia
TPP PDBeChem
YMDB00381 YMDB
View more database links
Registry Numbers Types Sources
136-08-3 CAS Registry Number ChemIDplus
3577792 Reaxys Registry Number Reaxys
Citations
Sabui S, Romero JM, Said HM (2021)
Developmental maturation of the colonic uptake process of the microbiota-generated thiamin pyrophosphate.
American journal of physiology. Gastrointestinal and liver physiology 320, G829-G835 [PubMed:33759569]
[show Abstract]
Nauton L, Hecquet L, Théry V (2021)
QM/MM Study of Human Transketolase: Thiamine Diphosphate Activation Mechanism and Complete Catalytic Cycle.
Journal of chemical information and modeling 61, 3502-3515 [PubMed:34161071]
[show Abstract]
Leandro J, Khamrui S, Wang H, Suebsuwong C, Nemeria NS, Huynh K, Moustakim M, Secor C, Wang M, Dodatko T, Stauffer B, Wilson CG, Yu C, Arkin MR, Jordan F, Sanchez R, DeVita RJ, Lazarus MB, Houten SM (2020)
Inhibition and Crystal Structure of the Human DHTKD1-Thiamin Diphosphate Complex.
ACS chemical biology 15, 2041-2047 [PubMed:32633484]
[show Abstract]
Noordally ZB, Trichtinger C, Dalvit I, Hofmann M, Roux C, Zamboni N, Pourcel L, Gas-Pascual E, Gisler A, Fitzpatrick TB (2020)
The coenzyme thiamine diphosphate displays a daily rhythm in the Arabidopsis nucleus.
Communications biology 3, 209 [PubMed:32372067]
[show Abstract]
Moraes RCM, Singulani MP, Gonçalves AC, Portari GV, Torrão ADS (2020)
Oral benfotiamine reverts cognitive deficit and increase thiamine diphosphate levels in the brain of a rat model of neurodegeneration.
Experimental gerontology 141, 111097 [PubMed:32987117]
[show Abstract]
Marsden SR, McMillan DGG, Hanefeld U (2020)
Assessing the Thiamine Diphosphate Dependent Pyruvate Dehydrogenase E1 Subunit for Carboligation Reactions with Aliphatic Ketoacids.
International journal of molecular sciences 21, E8641 [PubMed:33207817]
[show Abstract]
Taylor AJ, Talwar D, Lee SJ, Cox L, Mayxay M, Newton PN (2020)
Comparison of Thiamin Diphosphate High-Performance Liquid Chromatography and Erythrocyte Transketolase Assays for Evaluating Thiamin Status in Malaria Patients without Beriberi.
The American journal of tropical medicine and hygiene 103, 2600-2604 [PubMed:32996449]
[show Abstract]
Rosado-Souza L, Proost S, Moulin M, Bergmann S, Bocobza SE, Aharoni A, Fitzpatrick TB, Mutwil M, Fernie AR, Obata T (2019)
Appropriate Thiamin Pyrophosphate Levels Are Required for Acclimation to Changes in Photoperiod.
Plant physiology 180, 185-197 [PubMed:30837347]
[show Abstract]
Iacopetta D, Carrisi C, De Filippis G, Calcagnile VM, Cappello AR, Chimento A, Curcio R, Santoro A, Vozza A, Dolce V, Palmieri F, Capobianco L (2010)
The biochemical properties of the mitochondrial thiamine pyrophosphate carrier from Drosophila melanogaster.
The FEBS journal 277, 1172-1181 [PubMed:20121944]
[show Abstract]
Höltershinken M, Höhling A, Witte B, Scholz H (2007)
[Thiamine and its derivates in cattle blood measured by HPLC in healthy animals, in patients suffering from CCN and in their cohorts].
DTW. Deutsche tierarztliche Wochenschrift 114, 212-218 [PubMed:17642321]
[show Abstract]
Ajjawi I, Rodriguez Milla MA, Cushman J, Shintani DK (2007)
Thiamin pyrophosphokinase is required for thiamin cofactor activation in Arabidopsis.
Plant molecular biology 65, 151-162 [PubMed:17611796]
[show Abstract]
Nemeria N, Chakraborty S, Baykal A, Korotchkina LG, Patel MS, Jordan F (2007)
The 1',4'-iminopyrimidine tautomer of thiamin diphosphate is poised for catalysis in asymmetric active centers on enzymes.
Proceedings of the National Academy of Sciences of the United States of America 104, 78-82 [PubMed:17182735]
[show Abstract]
Mojzita D, Hohmann S (2006)
Pdc2 coordinates expression of the THI regulon in the yeast Saccharomyces cerevisiae.
Molecular genetics and genomics : MGG 276, 147-161 [PubMed:16850348]
[show Abstract]
Lindhurst MJ, Fiermonte G, Song S, Struys E, De Leonardis F, Schwartzberg PL, Chen A, Castegna A, Verhoeven N, Mathews CK, Palmieri F, Biesecker LG (2006)
Knockout of Slc25a19 causes mitochondrial thiamine pyrophosphate depletion, embryonic lethality, CNS malformations, and anemia.
Proceedings of the National Academy of Sciences of the United States of America 103, 15927-15932 [PubMed:17035501]
[show Abstract]
Edwards TE, Ferré-D'Amaré AR (2006)
Crystal structures of the thi-box riboswitch bound to thiamine pyrophosphate analogs reveal adaptive RNA-small molecule recognition.
Structure (London, England : 1993) 14, 1459-1468 [PubMed:16962976]
[show Abstract]
Jordan F, Nemeria NS (2005)
Experimental observation of thiamin diphosphate-bound intermediates on enzymes and mechanistic information derived from these observations.
Bioorganic chemistry 33, 190-215 [PubMed:15888311]
[show Abstract]
Foulon V, Sniekers M, Huysmans E, Asselberghs S, Mahieu V, Mannaerts GP, Van Veldhoven PP, Casteels M (2005)
Breakdown of 2-hydroxylated straight chain fatty acids via peroxisomal 2-hydroxyphytanoyl-CoA lyase: a revised pathway for the alpha-oxidation of straight chain fatty acids.
The Journal of biological chemistry 280, 9802-9812 [PubMed:15644336]
[show Abstract]
Casteels M, Foulon V, Mannaerts GP, Van Veldhoven PP (2003)
Alpha-oxidation of 3-methyl-substituted fatty acids and its thiamine dependence.
European journal of biochemistry 270, 1619-1627 [PubMed:12694175]
[show Abstract]
Gerhardt S, Echt S, Busch M, Freigang J, Auerbach G, Bader G, Martin WF, Bacher A, Huber R, Fischer M (2003)
Structure and properties of an engineered transketolase from maize.
Plant physiology 132, 1941-1949 [PubMed:12913150]
[show Abstract]
Lévy S, Hervé C, Delacoux E, Erlinger S (2002)
Thiamine deficiency in hepatitis C virus and alcohol-related liver diseases.
Digestive diseases and sciences 47, 543-548 [PubMed:11911339]
[show Abstract]
Molina JA, Jiménez-Jiménez FJ, Hernánz A, Fernández-Vivancos E, Medina S, de Bustos F, Gómez-Escalonilla C, Sayed Y (2002)
Cerebrospinal fluid levels of thiamine in patients with Alzheimer's disease.
Journal of neural transmission (Vienna, Austria : 1996) 109, 1035-1044 [PubMed:12111441]
[show Abstract]
Naito E, Ito M, Yokota I, Saijo T, Ogawa Y, Kuroda Y (2002)
Diagnosis and molecular analysis of three male patients with thiamine-responsive pyruvate dehydrogenase complex deficiency.
Journal of the neurological sciences 201, 33-37 [PubMed:12163191]
[show Abstract]
Marobbio CM, Vozza A, Harding M, Bisaccia F, Palmieri F, Walker JE (2002)
Identification and reconstitution of the yeast mitochondrial transporter for thiamine pyrophosphate.
The EMBO journal 21, 5653-5661 [PubMed:12411483]
[show Abstract]
Singleton CK, Martin PR (2001)
Molecular mechanisms of thiamine utilization.
Current molecular medicine 1, 197-207 [PubMed:11899071]
[show Abstract]
Talwar D, Davidson H, Cooney J, St JO'Reilly D (2000)
Vitamin B(1) status assessed by direct measurement of thiamin pyrophosphate in erythrocytes or whole blood by HPLC: comparison with erythrocyte transketolase activation assay.
Clinical chemistry 46, 704-710 [PubMed:10794754]
[show Abstract]
Frank T, Bitsch R, Maiwald J, Stein G (2000)
High thiamine diphosphate concentrations in erythrocytes can be achieved in dialysis patients by oral administration of benfontiamine.
European journal of clinical pharmacology 56, 251-257 [PubMed:10952481]
[show Abstract]
Essama-Tjani JC, Guilland JC, Fuchs F, Lombard M, Richard D (2000)
Changes in thiamin, riboflavin, niacin, beta-carotene, vitamins, C, A, D and E status of French Elderly Subjects during the first year of institutionalization.
International journal for vitamin and nutrition research. Internationale Zeitschrift fur Vitamin- und Ernahrungsforschung. Journal international de vitaminologie et de nutrition 70, 54-64 [PubMed:10804457]
[show Abstract]
Winston AP, Jamieson CP, Madira W, Gatward NM, Palmer RL (2000)
Prevalence of thiamin deficiency in anorexia nervosa.
The International journal of eating disorders 28, 451-454 [PubMed:11054793]
[show Abstract]
Schenk G, Duggleby RG, Nixon PF (1998)
Properties and functions of the thiamin diphosphate dependent enzyme transketolase.
The international journal of biochemistry & cell biology 30, 1297-1318 [PubMed:9924800]
[show Abstract]
Lynch PL, Trimble ER, Young IS (1997)
High-performance liquid chromatographic determination of thiamine diphosphate in erythrocytes using internal standard methodology.
Journal of chromatography. B, Biomedical sciences and applications 701, 120-123 [PubMed:9389346]
[show Abstract]
Arjunan P, Umland T, Dyda F, Swaminathan S, Furey W, Sax M, Farrenkopf B, Gao Y, Zhang D, Jordan F (1996)
Crystal structure of the thiamin diphosphate-dependent enzyme pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at 2.3 A resolution.
Journal of molecular biology 256, 590-600 [PubMed:8604141]
[show Abstract]
Lavoie J, Butterworth RF (1995)
Reduced activities of thiamine-dependent enzymes in brains of alcoholics in the absence of Wernicke's encephalopathy.
Alcoholism, clinical and experimental research 19, 1073-1077 [PubMed:7485819]
[show Abstract]
Shimon I, Almog S, Vered Z, Seligmann H, Shefi M, Peleg E, Rosenthal T, Motro M, Halkin H, Ezra D (1995)
Improved left ventricular function after thiamine supplementation in patients with congestive heart failure receiving long-term furosemide therapy.
The American journal of medicine 98, 485-490 [PubMed:7733128]
[show Abstract]
Fidanza F, Simonetti MS, Floridi A, Codini M, Fidanza R (1989)
Comparison of methods for thiamin and riboflavin nutriture in man.
International journal for vitamin and nutrition research. Internationale Zeitschrift fur Vitamin- und Ernahrungsforschung. Journal international de vitaminologie et de nutrition 59, 40-47 [PubMed:2722424]
[show Abstract]
Tate JR, Nixon PF (1987)
Measurement of Michaelis constant for human erythrocyte transketolase and thiamin diphosphate.
Analytical biochemistry 160, 78-87 [PubMed:3565758]
[show Abstract]
Baines M (1985)
Improved high performance liquid chromatographic determination of thiamin diphosphate in erythrocytes.
Clinica chimica acta; international journal of clinical chemistry 153, 43-48 [PubMed:4075519]
Floridi A, Pupita M, Palmerini CA, Fini C, Alberti Fidanza A (1984)
Thiamine pyrophosphate determination in whole blood and erythrocytes by high performance liquid chromatography.
International journal for vitamin and nutrition research. Internationale Zeitschrift fur Vitamin- und Ernahrungsforschung. Journal international de vitaminologie et de nutrition 54, 165-171 [PubMed:6500839]
[show Abstract]
Warnock LG (1982)
The measurement of erythrocyte thiamin pyrophosphate by high-performance liquid chromatography.
Analytical biochemistry 126, 394-397 [PubMed:7158773]
Duffy P, Morris H, Neilson G (1981)
Thiamin status of a Melanesian population.
The American journal of clinical nutrition 34, 1584-1592 [PubMed:7270482]
[show Abstract]
Tumanov VN, Trebukhina RV (1981)
[Enzyme activity of thiamine diphosphate biosynthesis and degradation in the mouse liver in the dynamics of B1 avitaminosis development].
Voprosy meditsinskoi khimii 27, 785-788 [PubMed:6121420]
[show Abstract]
Kjosen B, Seim SH (1977)
The transketolase assay of thiamine in some diseases.
The American journal of clinical nutrition 30, 1591-1596 [PubMed:910736]
[show Abstract]
Last Modified
19 July 2021