The Electron Microscopy Data Bank (EMDB) is a public repository for cryogenic-sample Electron Microscopy (cryoEM) volumes and representative tomograms of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, helical reconstruction, electron tomography, subtomogram averaging, and electron crystallography. More...
As of 25 September 2024, EMDB contains 38770 entries (latest entries, trends).
EMDB News
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06 January 2024: We are delighted to share that EMDB has officially been elevated to a Core Data Resource by ELIXIR, recognising it as a European data resource of fundamental importance to the wider life-science community and the long-term preservation of biological data.
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22 November 2023: We are happy to share the most recent version of the EMDB Nucleic Acids Research paper. The paper describes recent developments and future plans of the EMDB in the context of the worldwide Protein Data Bank. Check it out now! https://doi.org/10.1093/nar/gkad1019
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Recent Entries
(Show all)Connexin-32 hemichannel upon addition of 2-aminoetoxydiphenyl borate
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class G)
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-open state
Structure of active state MC4R in complex with a potent ligand mimicking nanobody
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class B)
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class D)
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class C)
Pfr state of photosensory core module of Stigmatella aurantiaca bacteriophytochrome 2
Refined plasminogen binding group A streptococcus M-like protein isolate from AP53 bound to human plasminogen full map
Mycobacteriophage Bxb1 tail tube segment - Composite map and model
Lineage IV Lassa virus glycoprotein (Josiah) in complex with rabbit polyclonal antibody (GPC-C epitope)
Structure of the PARIS immune complex with AriB subunits in C3 arrangement.
CryoEM structure of neutralizing antibody HC84.26 in complex with Hepatitis C virus envelope glycoprotein E2_New interface
Lineage IV Lassa virus glycoprotein (Josiah) in complex with polyclonal antibody (GPC-A epitope) from rabbit 189
Heterochromatin protein 1 (HP1) alpha in complex with an H2A.Z nucleosome(focused refined map)
Octameric prenyltransferase domain of linkerless Fusicoccadiene synthase with C2 symmetry without associated cyclase domains
In-cell Toxoplasma gondii nuclear pore complex inner ring focused refinement
In-cell Toxoplasma gondii symmetry-expanded nuclear pore complex consensus map
(Consensus Map) - "Mechanism of dual pharmacological correction and potentiation of human CFTR"
Pr/Pfr heterodimeric state of photosensory core module of Stigmatella aurantiaca bacteriophytochrome 2
Non-uniform refinement map used for local refinement of transmembrane region
Lineage IV Lassa virus glycoprotein (Josiah) in complex with rabbit polyclonal antibody (LAVA01-like epitope)
Map of the AriA homohexamer following release of the AriB effector during PARIS-mediated defense.
In-cell Toxoplasma gondii nuclear pore complex lumenal ring focused refinement
(Local CORE2 Map) - "Mechanism of dual pharmacological correction and potentiation of human CFTR"
In-cell Toxoplasma gondii nuclear pore complex membrane focused refinement
Lineage IV Lassa virus glycoprotein (Josiah) in complex with monoclonal antibody 8.9F
In-cell Toxoplasma gondii nuclear pore complex nuclear ring focused refinement
K9me3-H2A.Z nucleosome from focus refinement of the HP1-H2A.Z nucleosome complex
Lineage IV Lassa virus glycoprotein (Josiah) in complex with rabbit polyclonal antibody (GP1-A epitope)
Cryo-EM structure of the Carboxyltransferase Domain of Trichoplusia ni Acetyl-Coenzyme A Carboxylase
In-cell Toxoplasma gondii nuclear pore complex cytoplasmic ring focused refinement
Mycobacteriophage Bxb1 portal and connector assembly - Composite map and model
Pr/Pfr heterodimer (hybrid) state of Stigmatella aurantiaca bacteriophytochrome 2
(Local hNBD1 Map) - "Mechanism of dual pharmacological correction and potentiation of human CFTR"
Lineage IV Lassa virus glycoprotein (Josiah) in complex with polyclonal antibody (GPC-A epitope) from rabbit 187
Structure of Heterochromatin Protein 1 (HP1) alpha in complex with an H2A.Z nucleosome
structure of phage T6 topoisomerase II central domain bound with DNA
Cryo EM structure of Komagataella phaffii RNAPII-Rat1-Rai1 pre-termination complex
Cryo EM structure of Komagataella phaffii Rat1-Rai1 complex bound within the RNAPII cleft
Cryo-EM structure of the ZAC zinc-activated channel in the Cys-loop receptor superfamily
Cryo EM structure of Komagataella phaffii Rat1-Rai1-Rtt103 complex
Structure of Tomato spotted wilt virus L protein contained endoH domain binding to 3'5'vRNA
structure of Tomato spotted wilt virus L protein binding to 5'vRNA
structure of phage T4 topoisomerase II central domain bound with DNA
Cryo-EM structure of the human glucose transporter, GLUT7 in outward-facing open conformation
structure of phage T4 topoisomerase II gp52 subunit WHD-open state
structure of phage T6 topoisomerase II central domain bound with DNA and m-AMSA
Structure of tomato spotted wilt virus L protein binding to Ribavirin
structure of phage T6 topoisomerase II ATPase domain bound with AMPPNP
MPOX E5 hexamer ADP and ssDNA bound and clear primase domain conformation
Cryo-EM structure of prolactin-releasing peptide recognition with Gq
The cryoEM structure of H5N1 HA split from symmetric filament in conformation A
The cryoEM reconstruction of H5N1 HA asymmetric filament in conformation B
The cryoEM reconstruction of single H5N1 HA trimer in complex with FabH5M9
Cryo-EM structure of prolactin-releasing peptide recognition with Gi
The cryoEM reconstruction of H5N1 HA symmetric filament in conformation A class 2
The cryoEM reconstruction of H5N1 HA asymmetric filament in conformation C
The cryoEM reconstruction of H5N1 HA symmetric filament in conformation A class 1
Cryo-EM structure of actomyosin-5a-S1(nucleotide free, motor + 2IQ)
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class H)
Connexin-32 gap junction channel in complex with 2-aminoethoxydiphenyl borate
Cryo-EM reconstruction of VP4 assembly from SA11 Rotavirus Non-Tripsinized Triple Layered Particle
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-open state
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class I)
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class F)
Cryo-EM reconstruction of VP5*/VP8* assembly from SA11 Rotavirus Tripsinized Triple Layered Particle
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class A)
Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free, class E)