EMD-10706

Single-particle
3.78 Å
EMD-10706 Deposition: 26/02/2020
Map released: 08/04/2020
Last modified: 22/05/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-10706

Cryo-EM structure of a Phenuiviridae L protein

EMD-10706

Single-particle
3.78 Å
EMD-10706 Deposition: 26/02/2020
Map released: 08/04/2020
Last modified: 22/05/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: SFTS virus AH12
Sample: Severe Fever with Thrombocytopenia Syndrome Virus L Protein
Fitted models: 6y6k (Avg. Q-score: 0.522)

Deposition Authors: Vogel D , Thorkelsson SR
Structural and functional characterization of the severe fever with thrombocytopenia syndrome virus L protein.
Vogel D , Thorkelsson SR, Quemin ERJ, Meier K , Kouba T , Gogrefe N, Busch C, Reindl S, Gunther S , Cusack S , Grunewald K , Rosenthal M
(2020) Nucleic Acids Res , 48 , 5749 - 5765
PUBMED: 32313945
DOI: doi:10.1093/nar/gkaa253
ISSN: 1362-4962
ASTM: NARHAD
Abstract:
The Bunyavirales order contains several emerging viruses with high epidemic potential, including Severe fever with thrombocytopenia syndrome virus (SFTSV). The lack of medical countermeasures, such as vaccines and antivirals, is a limiting factor for the containment of any virus outbreak. To develop such antivirals a profound understanding of the viral replication process is essential. The L protein of bunyaviruses is a multi-functional and multi-domain protein performing both virus transcription and genome replication and, therefore, is an ideal drug target. We established expression and purification procedures for the full-length L protein of SFTSV. By combining single-particle electron cryo-microscopy and X-ray crystallography, we obtained 3D models covering ∼70% of the SFTSV L protein in the apo-conformation including the polymerase core region, the endonuclease and the cap-binding domain. We compared this first L structure of the Phenuiviridae family to the structures of La Crosse peribunyavirus L protein and influenza orthomyxovirus polymerase. Together with a comprehensive biochemical characterization of the distinct functions of SFTSV L protein, this work provides a solid framework for future structural and functional studies of L protein-RNA interactions and the development of antiviral strategies against this group of emerging human pathogens.